RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 K7EQM0 130 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 SIVA1O15304 175 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 MT-ND6P03923 174 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 PRB4P10163 310 aaPredicted RBP6.73□□□□□ -1.33
TPM1-225ENST00000560679 TCL1AP56279 114 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 CT83Q5H943 113 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 GFI1BQ5VTD9 330 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 PRR27Q6MZM9 219 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 GOLT1AQ6ZVE7 132 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 EXOC3-AS1Q8N2X6 119 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 ARL6IP6Q8N6S5 226 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 TMEM75Q8N9X5 138 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 NUDT10Q8NFP7 164 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 NUDT11Q96G61 164 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 VSIG2Q96IQ7 327 aa6.73□□□□□ -1.33
TPM1-225ENST00000560679 SERTM2A0A1B0GWG4 89 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 GAGE12BA1L429 117 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 ZNF253O75346 499 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 GAGE7O76087 117 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 NXPH4O95158 308 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 IGLV2-11P01706 119 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 GAGE12FP0CL80 117 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 GAGE12GP0CL81 117 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 GAGE12IP0CL82 117 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 KIR3DS1Q14943 382 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 ZNF493Q6ZR52 646 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 TSKUQ8WUA8 353 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 GNB1LQ9BYB4 327 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 MRPL18Q9H0U6 180 aaKnown RBP6.72□□□□□ -1.33
TPM1-225ENST00000560679 RPP21Q9H633 154 aaKnown RBP6.72□□□□□ -1.33
TPM1-225ENST00000560679 AAMDCQ9H7C9 122 aa6.72□□□□□ -1.33
TPM1-225ENST00000560679 A0A087X0K7 114 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 C19orf71A6NCJ1 209 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 SNURFLB1AK76 121 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 DIRC3C9JPN6 131 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 CSN1S1P47710 185 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 HIST1H1AQ02539 215 aaPredicted RBP6.71□□□□□ -1.34
TPM1-225ENST00000560679 PDZD11Q5EBL8 140 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 RASL11AQ6T310 242 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 TMEM136Q6ZRR5 245 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 PRNTQ86SH4 94 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 ZNF738Q8NE65 137 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 OR10D4PQ8NGN7 298 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 SGK494Q96LW2 274 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 HIST1H2BLQ99880 126 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 TMEM70Q9BUB7 260 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 FAM30AQ9NZY2 134 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 ZFP30Q9Y2G7 519 aa6.71□□□□□ -1.34
TPM1-225ENST00000560679 TRAV8-1A0A0A6YYK1 113 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 FBLL1A6NHQ2 334 aaKnown RBP6.7□□□□□ -1.34
TPM1-225ENST00000560679 A8MWL6 223 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 P01737 135 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 HLA-DQA1P01909 254 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 FABP4P15090 132 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 PSG3Q16557 428 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 DNLZQ5SXM8 178 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 MRPL54Q6P161 138 aaKnown RBP6.7□□□□□ -1.34
TPM1-225ENST00000560679 ATP5L2Q7Z4Y8 100 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 NFE4Q86UQ8 179 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 SYT8Q8NBV8 401 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 OR8A1Q8NGG7 326 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 DAZAP1Q96EP5 407 aaKnown RBP6.7□□□□□ -1.34
TPM1-225ENST00000560679 ZNF331Q9NQX6 463 aaPredicted RBP6.7□□□□□ -1.34
TPM1-225ENST00000560679 NAT8BQ9UHF3 227 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 PSG8Q9UQ74 426 aa6.7□□□□□ -1.34
TPM1-225ENST00000560679 NPIPB6E9PJ23 425 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 M0R3E3 92 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 SPINK4O60575 86 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 CRISP2P16562 243 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 CDKN1BP46527 198 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 S100A12P80511 92 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 Q6ZTI0 123 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 NUP35Q8NFH5 326 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 PACRGQ96M98 296 aaPredicted RBP6.69□□□□□ -1.34
TPM1-225ENST00000560679 GFRA4Q9GZZ7 299 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 NIT2Q9NQR4 276 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 PLA2G2DQ9UNK4 145 aa6.69□□□□□ -1.34
TPM1-225ENST00000560679 A0A1B0GXF2 115 aa6.68□□□□□ -1.34
TPM1-225ENST00000560679 FAM231BA6NCW3 169 aa6.68□□□□□ -1.34
TPM1-225ENST00000560679 HIGD1CA8MV81 97 aa6.68□□□□□ -1.34
TPM1-225ENST00000560679 RAB4BP61018 213 aa6.68□□□□□ -1.34
TPM1-225ENST00000560679 PYY3Q5JQD4 70 aa6.68□□□□□ -1.34
TPM1-225ENST00000560679 TMEM18Q96B42 140 aa6.68□□□□□ -1.34
TPM1-225ENST00000560679 ZC2HC1AQ96GY0 325 aa6.68□□□□□ -1.34
TPM1-225ENST00000560679 SLC50A1Q9BRV3 221 aa6.68□□□□□ -1.34
TPM1-225ENST00000560679 IGKV2-40A0A087WW87 121 aaPredicted RBP6.67□□□□□ -1.34
TPM1-225ENST00000560679 IGLV5-52A0A0A0MRZ9 124 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 PCP4L1A6NKN8 68 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 IGKV2D-40P01614 121 aaPredicted RBP6.67□□□□□ -1.34
TPM1-225ENST00000560679 APCSP02743 223 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 CT45A10P0DMU9 189 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 ESDP10768 282 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 Q0VG73 95 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 COX8CQ7Z4L0 72 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 OR2D3Q8NGH3 330 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 LINC00467Q9BRT7 94 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 TNXBP22105 4242 aa6.67□□□□□ -1.34
TPM1-225ENST00000560679 GRIFINA4D1Z8 144 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms