RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 C5orf17Q8NAS9 161 aa10.52□□□□□ -0.73
HERC1-207ENST00000560316 SCGB1C1Q8TD33 95 aa10.52□□□□□ -0.73
HERC1-207ENST00000560316 K7EQM0 130 aa10.51□□□□□ -0.73
HERC1-207ENST00000560316 PHOX2AO14813 284 aa10.51□□□□□ -0.73
HERC1-207ENST00000560316 RAB2AP61019 212 aa10.51□□□□□ -0.73
HERC1-207ENST00000560316 CLPSL2Q6UWE3 100 aa10.51□□□□□ -0.73
HERC1-207ENST00000560316 SMIM3Q9BZL3 60 aa10.51□□□□□ -0.73
HERC1-207ENST00000560316 IL36BQ9NZH7 164 aa10.51□□□□□ -0.73
HERC1-207ENST00000560316 TRBV6-8A0A0A6YYG3 113 aa10.5□□□□□ -0.73
HERC1-207ENST00000560316 ARL14EPLP0DKL9 152 aa10.5□□□□□ -0.73
HERC1-207ENST00000560316 RPL36AP83881 106 aaKnown RBP10.5□□□□□ -0.73
HERC1-207ENST00000560316 MIAQ16674 131 aa10.5□□□□□ -0.73
HERC1-207ENST00000560316 KRTAP26-1Q6PEX3 210 aa10.5□□□□□ -0.73
HERC1-207ENST00000560316 RPL36ALQ969Q0 106 aaKnown RBP10.5□□□□□ -0.73
HERC1-207ENST00000560316 TRBV7-3A0A075B6L6 115 aa10.49□□□□□ -0.73
HERC1-207ENST00000560316 OR11H4Q8NGC9 324 aa10.49□□□□□ -0.73
HERC1-207ENST00000560316 TRBV10-1A0A0K0K1A3 114 aa10.48□□□□□ -0.73
HERC1-207ENST00000560316 B4DEV8 164 aa10.48□□□□□ -0.73
HERC1-207ENST00000560316 ARMS2P0C7Q2 107 aa10.48□□□□□ -0.73
HERC1-207ENST00000560316 SAPCD1Q5SSQ6 148 aa10.48□□□□□ -0.73
HERC1-207ENST00000560316 SFRP2Q96HF1 295 aa10.48□□□□□ -0.73
HERC1-207ENST00000560316 CHCHD5Q9BSY4 110 aa10.48□□□□□ -0.73
HERC1-207ENST00000560316 HSPB11Q9Y547 144 aa10.48□□□□□ -0.73
HERC1-207ENST00000560316 KIF25-AS1Q9Y6Z4 181 aa10.48□□□□□ -0.73
HERC1-207ENST00000560316 FABP5P3A8MUU1 101 aa10.47□□□□□ -0.73
HERC1-207ENST00000560316 PTTG1O95997 202 aa10.47□□□□□ -0.73
HERC1-207ENST00000560316 CNBPP62633 177 aaKnown RBP10.47□□□□□ -0.73
HERC1-207ENST00000560316 SUMO1P63165 101 aaKnown RBP10.47□□□□□ -0.73
HERC1-207ENST00000560316 CLRN3Q8NCR9 226 aa10.47□□□□□ -0.73
HERC1-207ENST00000560316 SPACA4Q8TDM5 124 aa10.47□□□□□ -0.73
HERC1-207ENST00000560316 RNF185Q96GF1 192 aa10.47□□□□□ -0.73
HERC1-207ENST00000560316 EPDR1Q9UM22 224 aa10.47□□□□□ -0.73
HERC1-207ENST00000560316 IGHV3-64A0A075B6Q5 118 aa10.46□□□□□ -0.73
HERC1-207ENST00000560316 TRAV34A0A0B4J273 112 aa10.46□□□□□ -0.73
HERC1-207ENST00000560316 A0A0J9YXV3 536 aa10.46□□□□□ -0.73
HERC1-207ENST00000560316 hDV102S1A0JD36 115 aa10.46□□□□□ -0.73
HERC1-207ENST00000560316 GRIFINA4D1Z8 144 aa10.46□□□□□ -0.73
HERC1-207ENST00000560316 M0R381 172 aa10.46□□□□□ -0.73
HERC1-207ENST00000560316 C7orf33Q8WU49 177 aa10.46□□□□□ -0.73
HERC1-207ENST00000560316 RBM38Q9H0Z9 239 aaKnown RBP10.46□□□□□ -0.73
HERC1-207ENST00000560316 WFDC1Q9HC57 220 aa10.46□□□□□ -0.73
HERC1-207ENST00000560316 M0R036 132 aa10.45□□□□□ -0.74
HERC1-207ENST00000560316 SLPIP03973 132 aa10.45□□□□□ -0.74
HERC1-207ENST00000560316 KRTAP10-8P60410 259 aa10.45□□□□□ -0.74
HERC1-207ENST00000560316 WDR73Q6P4I2 378 aa10.45□□□□□ -0.74
HERC1-207ENST00000560316 LINC00269Q8N2A0 174 aa10.45□□□□□ -0.74
HERC1-207ENST00000560316 OR10G8Q8NGN5 311 aa10.45□□□□□ -0.74
HERC1-207ENST00000560316 PRR34Q9NV39 138 aa10.45□□□□□ -0.74
HERC1-207ENST00000560316 PHLDA3Q9Y5J5 127 aa10.45□□□□□ -0.74
HERC1-207ENST00000560316 ARL2-SNX15V9GYD0 113 aa10.45□□□□□ -0.74
HERC1-207ENST00000560316 KRBOX1C9JBD0 128 aa10.44□□□□□ -0.74
HERC1-207ENST00000560316 STAG3L2P0CL84 134 aa10.44□□□□□ -0.74
HERC1-207ENST00000560316 STAG3L3P0CL85 134 aa10.44□□□□□ -0.74
HERC1-207ENST00000560316 GCHFRP30047 84 aa10.44□□□□□ -0.74
HERC1-207ENST00000560316 CDC34P49427 236 aaPredicted RBP10.44□□□□□ -0.74
HERC1-207ENST00000560316 DNLZQ5SXM8 178 aa10.44□□□□□ -0.74
HERC1-207ENST00000560316 NEXN-AS1Q8NBZ9 246 aa10.44□□□□□ -0.74
HERC1-207ENST00000560316 SUN5Q8TC36 379 aa10.44□□□□□ -0.74
HERC1-207ENST00000560316 PLAC8Q9NZF1 115 aa10.44□□□□□ -0.74
HERC1-207ENST00000560316 LPAP08519 4548 aa10.44□□□□□ -0.74
HERC1-207ENST00000560316 IGLV10-54A0A075B6I4 117 aa10.43□□□□□ -0.74
HERC1-207ENST00000560316 FAM240BA0A1B0GVZ2 78 aa10.43□□□□□ -0.74
HERC1-207ENST00000560316 RBX1P62877 108 aa10.43□□□□□ -0.74
HERC1-207ENST00000560316 PRR3P79522 188 aaKnown RBP10.43□□□□□ -0.74
HERC1-207ENST00000560316 PPP1R1CQ8WVI7 109 aa10.43□□□□□ -0.74
HERC1-207ENST00000560316 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
HERC1-207ENST00000560316 TPT1P13693 172 aaKnown RBP10.42□□□□□ -0.74
HERC1-207ENST00000560316 RPL12P30050 165 aaKnown RBP10.42□□□□□ -0.74
HERC1-207ENST00000560316 CRIP1P50238 77 aa10.42□□□□□ -0.74
HERC1-207ENST00000560316 PKIAP61925 76 aa10.42□□□□□ -0.74
HERC1-207ENST00000560316 GAGE6Q13070 117 aa10.42□□□□□ -0.74
HERC1-207ENST00000560316 NTM-AS1Q6ZSK4 140 aa10.42□□□□□ -0.74
HERC1-207ENST00000560316 CYCSP99999 105 aaKnown RBP10.41□□□□□ -0.74
HERC1-207ENST00000560316 RAB24Q969Q5 203 aa10.41□□□□□ -0.74
HERC1-207ENST00000560316 AP5S1Q9NUS5 200 aa10.41□□□□□ -0.74
HERC1-207ENST00000560316 TMSB15BA0A087X1C1 80 aa10.4□□□□□ -0.74
HERC1-207ENST00000560316 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.4□□□□□ -0.74
HERC1-207ENST00000560316 SH2D1AO60880 128 aa10.4□□□□□ -0.74
HERC1-207ENST00000560316 H2BFSP57053 126 aa10.4□□□□□ -0.74
HERC1-207ENST00000560316 ZFP82Q8N141 532 aa10.4□□□□□ -0.74
HERC1-207ENST00000560316 KRTAP9-2Q9BYQ4 174 aa10.4□□□□□ -0.74
HERC1-207ENST00000560316 MPC2O95563 127 aa10.39□□□□□ -0.75
HERC1-207ENST00000560316 RAB4BP61018 213 aa10.39□□□□□ -0.75
HERC1-207ENST00000560316 ZNF56Q15929 161 aa10.39□□□□□ -0.75
HERC1-207ENST00000560316 Q86TA4 180 aa10.39□□□□□ -0.75
HERC1-207ENST00000560316 MUC21A0A0G2JKD1 596 aa10.38□□□□□ -0.75
HERC1-207ENST00000560316 RAB5CP51148 216 aa10.38□□□□□ -0.75
HERC1-207ENST00000560316 REG3AQ06141 175 aa10.38□□□□□ -0.75
HERC1-207ENST00000560316 MAJINQ3KP22 176 aa10.38□□□□□ -0.75
HERC1-207ENST00000560316 PRR27Q6MZM9 219 aa10.38□□□□□ -0.75
HERC1-207ENST00000560316 LYPD6BQ8NI32 183 aa10.38□□□□□ -0.75
HERC1-207ENST00000560316 COX6A2Q02221 97 aa10.37□□□□□ -0.75
HERC1-207ENST00000560316 REG3GQ6UW15 175 aa10.37□□□□□ -0.75
HERC1-207ENST00000560316 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.37□□□□□ -0.75
HERC1-207ENST00000560316 TMEM167BQ9NRX6 74 aa10.37□□□□□ -0.75
HERC1-207ENST00000560316 IGKV2-24A0A0C4DH68 120 aa10.36□□□□□ -0.75
HERC1-207ENST00000560316 CXorf1O96002 111 aa10.36□□□□□ -0.75
HERC1-207ENST00000560316 IFNA7P01567 189 aa10.36□□□□□ -0.75
HERC1-207ENST00000560316 FAM162BQ5T6X4 162 aa10.36□□□□□ -0.75
HERC1-207ENST00000560316 SPINK6Q6UWN8 80 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms