RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 LINC00574Q9H8X3 128 aa14.58□□□□□ -0.08
SEMA4B-215ENST00000560089 IGSF10Q6WRI0 2623 aa14.58□□□□□ -0.08
SEMA4B-215ENST00000560089 IGLV4-69A0A075B6H9 119 aa14.58□□□□□ -0.08
SEMA4B-215ENST00000560089 C17orf100A8MU93 164 aa14.58□□□□□ -0.08
SEMA4B-215ENST00000560089 ENSAO43768 121 aaKnown RBP14.58□□□□□ -0.08
SEMA4B-215ENST00000560089 ZNF491Q8N8L2 437 aa14.58□□□□□ -0.08
SEMA4B-215ENST00000560089 ACYP1P07311 99 aa14.57□□□□□ -0.08
SEMA4B-215ENST00000560089 CFHR4Q92496 578 aa14.57□□□□□ -0.08
SEMA4B-215ENST00000560089 C2orf48Q96LS8 159 aa14.57□□□□□ -0.08
SEMA4B-215ENST00000560089 CACNA1BQ00975 2339 aa14.57□□□□□ -0.08
SEMA4B-215ENST00000560089 CRYGDP07320 174 aa14.57□□□□□ -0.08
SEMA4B-215ENST00000560089 LINC00643Q86TS7 51 aa14.57□□□□□ -0.08
SEMA4B-215ENST00000560089 J3QQQ9 107 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 SUMO2P61956 95 aaKnown RBP14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 MSMPQ1L6U9 139 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 CCL13Q99616 98 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 IGFL4Q6B9Z1 124 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 FAM216BQ8N7L0 139 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 AMELXQ99217 191 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 PRORYQ9H606 182 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 I3L2K1 104 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 OXTP01178 125 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 SMCR5Q8TEV8 140 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 EEF1AKMT3Q96AZ1 226 aa14.56□□□□□ -0.08
SEMA4B-215ENST00000560089 IGLV1-44P01699 117 aa14.55□□□□□ -0.08
SEMA4B-215ENST00000560089 SPANXN1Q5VSR9 72 aa14.55□□□□□ -0.08
SEMA4B-215ENST00000560089 PKDREJQ9NTG1 2253 aa14.55□□□□□ -0.08
SEMA4B-215ENST00000560089 TMEM258P61165 79 aa14.55□□□□□ -0.08
SEMA4B-215ENST00000560089 Q5XG85 94 aa14.55□□□□□ -0.08
SEMA4B-215ENST00000560089 CYSTM1Q9H1C7 97 aa14.55□□□□□ -0.08
SEMA4B-215ENST00000560089 LHBP01229 141 aa14.54□□□□□ -0.08
SEMA4B-215ENST00000560089 USP24Q9UPU5 2620 aa14.54□□□□□ -0.08
SEMA4B-215ENST00000560089 SPTBN1Q01082 2364 aaKnown RBP14.54□□□□□ -0.08
SEMA4B-215ENST00000560089 IGHV3-72A0A0B4J1Y9 119 aa14.54□□□□□ -0.08
SEMA4B-215ENST00000560089 IGKV3D-20A0A0C4DH25 116 aa14.54□□□□□ -0.08
SEMA4B-215ENST00000560089 GAFA1Q96PS6 74 aa14.54□□□□□ -0.08
SEMA4B-215ENST00000560089 DSCR8Q96T75 97 aa14.54□□□□□ -0.08
SEMA4B-215ENST00000560089 ICOSQ9Y6W8 199 aa14.54□□□□□ -0.08
SEMA4B-215ENST00000560089 CCL21O00585 134 aa14.53□□□□□ -0.08
SEMA4B-215ENST00000560089 COX6CP09669 75 aa14.53□□□□□ -0.08
SEMA4B-215ENST00000560089 DLX1P56177 255 aa14.53□□□□□ -0.08
SEMA4B-215ENST00000560089 CDSNQ15517 529 aa14.53□□□□□ -0.08
SEMA4B-215ENST00000560089 TMEM223A0PJW6 202 aa14.53□□□□□ -0.08
SEMA4B-215ENST00000560089 CNTFRP26992 372 aa14.53□□□□□ -0.08
SEMA4B-215ENST00000560089 CLEC2BQ92478 149 aa14.53□□□□□ -0.08
SEMA4B-215ENST00000560089 SPRY2O43597 315 aa14.52□□□□□ -0.08
SEMA4B-215ENST00000560089 GRNP28799 593 aaKnown RBP14.52□□□□□ -0.08
SEMA4B-215ENST00000560089 SLC50A1Q9BRV3 221 aa14.52□□□□□ -0.09
SEMA4B-215ENST00000560089 DCHS2Q6V1P9 2916 aa14.52□□□□□ -0.09
SEMA4B-215ENST00000560089 F8WDY8 70 aa14.51□□□□□ -0.09
SEMA4B-215ENST00000560089 SPRY3O43610 288 aa14.51□□□□□ -0.09
SEMA4B-215ENST00000560089 CCL3L1P16619 93 aa14.51□□□□□ -0.09
SEMA4B-215ENST00000560089 ATOX1O00244 68 aa14.51□□□□□ -0.09
SEMA4B-215ENST00000560089 UBE2E1P51965 193 aa14.51□□□□□ -0.09
SEMA4B-215ENST00000560089 RPL39LQ96EH5 51 aaKnown RBP14.51□□□□□ -0.09
SEMA4B-215ENST00000560089 HIVEP3Q5T1R4 2406 aa14.5□□□□□ -0.09
SEMA4B-215ENST00000560089 C11orf21Q9P2W6 132 aa14.5□□□□□ -0.09
SEMA4B-215ENST00000560089 IGHV7-4-1A0A0J9YVY3 117 aa14.5□□□□□ -0.09
SEMA4B-215ENST00000560089 TEX22C9J3V5 150 aa14.49□□□□□ -0.09
SEMA4B-215ENST00000560089 CXCL5P42830 114 aa14.49□□□□□ -0.09
SEMA4B-215ENST00000560089 EPG5Q9HCE0 2579 aa14.49□□□□□ -0.09
SEMA4B-215ENST00000560089 RAI1Q7Z5J4 1906 aaPredicted RBP14.49□□□□□ -0.09
SEMA4B-215ENST00000560089 C5orf38Q86SI9 138 aa14.49□□□□□ -0.09
SEMA4B-215ENST00000560089 TRAV8-3A0A0A6YYJ7 113 aa14.48□□□□□ -0.09
SEMA4B-215ENST00000560089 DLX6P56179 175 aa14.48□□□□□ -0.09
SEMA4B-215ENST00000560089 DYNAPQ8N1N2 210 aa14.48□□□□□ -0.09
SEMA4B-215ENST00000560089 LINC00477Q96M19 166 aa14.48□□□□□ -0.09
SEMA4B-215ENST00000560089 JPT2Q9H910 190 aa14.48□□□□□ -0.09
SEMA4B-215ENST00000560089 LST1O00453 97 aa14.48□□□□□ -0.09
SEMA4B-215ENST00000560089 TSHBP01222 138 aa14.48□□□□□ -0.09
SEMA4B-215ENST00000560089 FAM19A4Q96LR4 140 aa14.48□□□□□ -0.09
SEMA4B-215ENST00000560089 ABCA4P78363 2273 aa14.48□□□□□ -0.09
SEMA4B-215ENST00000560089 RNF152Q8N8N0 203 aa14.47□□□□□ -0.09
SEMA4B-215ENST00000560089 LINC01560Q8TB33 94 aa14.47□□□□□ -0.09
SEMA4B-215ENST00000560089 RNF7Q9UBF6 113 aa14.47□□□□□ -0.09
SEMA4B-215ENST00000560089 J3QLI3 93 aa14.47□□□□□ -0.09
SEMA4B-215ENST00000560089 K7EIM0 57 aa14.47□□□□□ -0.09
SEMA4B-215ENST00000560089 BSPH1Q075Z2 132 aa14.47□□□□□ -0.09
SEMA4B-215ENST00000560089 S4R3C0 116 aa14.47□□□□□ -0.09
SEMA4B-215ENST00000560089 SPTAN1Q13813 2472 aaKnown RBP14.46□□□□□ -0.09
SEMA4B-215ENST00000560089 ANKHD1Q8IWZ3 2542 aaKnown RBP14.46□□□□□ -0.09
SEMA4B-215ENST00000560089 TP53TG1Q9Y2A0 90 aa14.46□□□□□ -0.1
SEMA4B-215ENST00000560089 ADORA2A-AS1P86434 159 aa14.45□□□□□ -0.1
SEMA4B-215ENST00000560089 PYGO1Q9Y3Y4 419 aa14.45□□□□□ -0.1
SEMA4B-215ENST00000560089 HRNRQ86YZ3 2850 aaPredicted RBP14.45□□□□□ -0.1
SEMA4B-215ENST00000560089 FLNCQ14315 2725 aa14.44□□□□□ -0.1
SEMA4B-215ENST00000560089 IGHV4-4A0A075B6R2 117 aa14.44□□□□□ -0.1
SEMA4B-215ENST00000560089 TRAV13-1A0A0B4J241 112 aa14.44□□□□□ -0.1
SEMA4B-215ENST00000560089 CRYGBP07316 175 aa14.44□□□□□ -0.1
SEMA4B-215ENST00000560089 PRAC2D3DTV9 90 aa14.43□□□□□ -0.1
SEMA4B-215ENST00000560089 MALP21145 153 aa14.43□□□□□ -0.1
SEMA4B-215ENST00000560089 RHOHQ15669 191 aa14.43□□□□□ -0.1
SEMA4B-215ENST00000560089 IGHV3-64A0A075B6Q5 118 aa14.43□□□□□ -0.1
SEMA4B-215ENST00000560089 LEPROTO15243 131 aa14.43□□□□□ -0.1
SEMA4B-215ENST00000560089 HIST1H4AP62805 103 aaKnown RBP14.43□□□□□ -0.1
SEMA4B-215ENST00000560089 NSUN5P1Q3KNT7 163 aa14.43□□□□□ -0.1
SEMA4B-215ENST00000560089 UTP20O75691 2785 aaKnown RBP14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 C1orf43Q9BWL3 253 aa14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 IGHV1-69DA0A0B4J2H0 117 aa14.42□□□□□ -0.1
SEMA4B-215ENST00000560089 RNF223E7ERA6 249 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms