RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 MUC21Q5SSG8 566 aa14.65□□□□□ -0.06
PSEN1-225ENST00000560005 SMIM15Q7Z3B0 74 aa14.65□□□□□ -0.06
PSEN1-225ENST00000560005 LRP1BQ9NZR2 4599 aa14.65□□□□□ -0.06
PSEN1-225ENST00000560005 HERC1Q15751 4861 aa14.64□□□□□ -0.07
PSEN1-225ENST00000560005 CRXO43186 299 aaPredicted RBP14.64□□□□□ -0.07
PSEN1-225ENST00000560005 TWIST1Q15672 202 aa14.64□□□□□ -0.07
PSEN1-225ENST00000560005 ZNF493Q6ZR52 646 aa14.64□□□□□ -0.07
PSEN1-225ENST00000560005 TRGC1P0CF51 173 aa14.63□□□□□ -0.07
PSEN1-225ENST00000560005 P0DMU3 169 aa14.63□□□□□ -0.07
PSEN1-225ENST00000560005 FAM231AP0DMU4 169 aa14.63□□□□□ -0.07
PSEN1-225ENST00000560005 FAM231CP0DMU5 169 aa14.63□□□□□ -0.07
PSEN1-225ENST00000560005 FXYD7P58549 80 aa14.63□□□□□ -0.07
PSEN1-225ENST00000560005 PHLDA3Q9Y5J5 127 aa14.63□□□□□ -0.07
PSEN1-225ENST00000560005 PHOX2AO14813 284 aa14.62□□□□□ -0.07
PSEN1-225ENST00000560005 MIFP14174 115 aa14.62□□□□□ -0.07
PSEN1-225ENST00000560005 NTF3P20783 257 aa14.62□□□□□ -0.07
PSEN1-225ENST00000560005 LGALS9BQ3B8N2 356 aa14.62□□□□□ -0.07
PSEN1-225ENST00000560005 SPANXN1Q5VSR9 72 aa14.62□□□□□ -0.07
PSEN1-225ENST00000560005 Q6ZQT7 251 aa14.62□□□□□ -0.07
PSEN1-225ENST00000560005 SCRT2Q9NQ03 307 aa14.62□□□□□ -0.07
PSEN1-225ENST00000560005 H3BVH4 76 aa14.61□□□□□ -0.07
PSEN1-225ENST00000560005 GNRH2O43555 120 aa14.61□□□□□ -0.07
PSEN1-225ENST00000560005 ZFP82Q8N141 532 aa14.61□□□□□ -0.07
PSEN1-225ENST00000560005 LINC01587Q99440 93 aa14.61□□□□□ -0.07
PSEN1-225ENST00000560005 DEFB131BA0A096LNP1 70 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 CBY3A6NI87 242 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST1H2BKO60814 126 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST1H2BJP06899 126 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 GIG44P09565 113 aaPredicted RBP14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST1H2BOP23527 126 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST1H2BBP33778 126 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST1H2BDP58876 126 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST1H2BCP62807 126 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST2H2BEQ16778 126 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST1H2BHQ93079 126 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST1H2BNQ99877 126 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 HIST1H2BMQ99879 126 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 TMEM208Q9BTX3 173 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 TMEM191AQ9H0A3 160 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 GOLT1BQ9Y3E0 138 aa14.6□□□□□ -0.07
PSEN1-225ENST00000560005 SYT8Q8NBV8 401 aa14.59□□□□□ -0.07
PSEN1-225ENST00000560005 XCL2Q9UBD3 114 aa14.59□□□□□ -0.07
PSEN1-225ENST00000560005 TP53TG3Q9ULZ0 132 aa14.59□□□□□ -0.07
PSEN1-225ENST00000560005 X6R8D5 127 aa14.59□□□□□ -0.07
PSEN1-225ENST00000560005 IGLV2-18A0A075B6J9 118 aa14.58□□□□□ -0.08
PSEN1-225ENST00000560005 IGHV3-16A0A0C4DH30 117 aa14.58□□□□□ -0.08
PSEN1-225ENST00000560005 RNASE3P12724 160 aaKnown RBP14.58□□□□□ -0.08
PSEN1-225ENST00000560005 NDUFAF3Q9BU61 184 aa14.58□□□□□ -0.08
PSEN1-225ENST00000560005 CELA1Q9UNI1 258 aa14.58□□□□□ -0.08
PSEN1-225ENST00000560005 C12orf74Q32Q52 190 aa14.57□□□□□ -0.08
PSEN1-225ENST00000560005 OR10AG1Q8NH19 301 aa14.57□□□□□ -0.08
PSEN1-225ENST00000560005 C9orf85Q96MD7 179 aa14.57□□□□□ -0.08
PSEN1-225ENST00000560005 TIMM8BQ9Y5J9 83 aaPredicted RBP14.57□□□□□ -0.08
PSEN1-225ENST00000560005 ZNF415Q09FC8 603 aa14.56□□□□□ -0.08
PSEN1-225ENST00000560005 SLAQ13239 276 aa14.56□□□□□ -0.08
PSEN1-225ENST00000560005 FAM104BQ5XKR9 115 aa14.56□□□□□ -0.08
PSEN1-225ENST00000560005 APOBP04114 4563 aaKnown RBP14.56□□□□□ -0.08
PSEN1-225ENST00000560005 NXPH4O95158 308 aa14.55□□□□□ -0.08
PSEN1-225ENST00000560005 NDUFA6P56556 154 aa14.55□□□□□ -0.08
PSEN1-225ENST00000560005 PIK3CD-AS1Q5SR53 167 aa14.55□□□□□ -0.08
PSEN1-225ENST00000560005 DMRTA1Q5VZB9 504 aa14.55□□□□□ -0.08
PSEN1-225ENST00000560005 Q6ZR54 194 aa14.55□□□□□ -0.08
PSEN1-225ENST00000560005 MAPKAPK5-AS1Q8N8E1 139 aa14.55□□□□□ -0.08
PSEN1-225ENST00000560005 PTH2Q96A98 100 aa14.55□□□□□ -0.08
PSEN1-225ENST00000560005 SPXQ9BT56 116 aa14.55□□□□□ -0.08
PSEN1-225ENST00000560005 MUC21A0A0G2JKD1 596 aa14.54□□□□□ -0.08
PSEN1-225ENST00000560005 MUC21A0A140T8X8 626 aa14.54□□□□□ -0.08
PSEN1-225ENST00000560005 PPBPP02775 128 aa14.54□□□□□ -0.08
PSEN1-225ENST00000560005 SSTP61278 116 aa14.54□□□□□ -0.08
PSEN1-225ENST00000560005 OR10J3Q5JRS4 329 aa14.54□□□□□ -0.08
PSEN1-225ENST00000560005 M0R381 172 aa14.53□□□□□ -0.08
PSEN1-225ENST00000560005 Q0VG73 95 aa14.53□□□□□ -0.08
PSEN1-225ENST00000560005 COA6Q5JTJ3 125 aaKnown RBP14.53□□□□□ -0.08
PSEN1-225ENST00000560005 UBE2DNLQ8IWF7 75 aa14.53□□□□□ -0.08
PSEN1-225ENST00000560005 C1orf158Q8N1D5 194 aa14.53□□□□□ -0.08
PSEN1-225ENST00000560005 AP1S3Q96PC3 154 aa14.53□□□□□ -0.08
PSEN1-225ENST00000560005 HTN1P15515 57 aa14.52□□□□□ -0.09
PSEN1-225ENST00000560005 SRIP30626 198 aa14.52□□□□□ -0.09
PSEN1-225ENST00000560005 KIAA1644Q3SXP7 199 aa14.52□□□□□ -0.09
PSEN1-225ENST00000560005 MSRB1Q9NZV6 116 aa14.52□□□□□ -0.09
PSEN1-225ENST00000560005 MDFICQ9P1T7 246 aa14.52□□□□□ -0.09
PSEN1-225ENST00000560005 C5orf52A6NGY3 159 aa14.51□□□□□ -0.09
PSEN1-225ENST00000560005 CDK2AP2O75956 126 aa14.51□□□□□ -0.09
PSEN1-225ENST00000560005 SMIM17P0DL12 118 aa14.51□□□□□ -0.09
PSEN1-225ENST00000560005 ALKBH7Q9BT30 221 aaPredicted RBP14.51□□□□□ -0.09
PSEN1-225ENST00000560005 DPH3P1Q9H4G8 78 aa14.51□□□□□ -0.09
PSEN1-225ENST00000560005 DNAH5Q8TE73 4624 aa14.51□□□□□ -0.09
PSEN1-225ENST00000560005 C16orf90A8MZG2 172 aa14.5□□□□□ -0.09
PSEN1-225ENST00000560005 M0R2P5 195 aa14.5□□□□□ -0.09
PSEN1-225ENST00000560005 ORMDL3Q8N138 153 aa14.5□□□□□ -0.09
PSEN1-225ENST00000560005 CSNK1G2-AS1Q8NCQ2 148 aa14.5□□□□□ -0.09
PSEN1-225ENST00000560005 LAMTOR2Q9Y2Q5 125 aa14.5□□□□□ -0.09
PSEN1-225ENST00000560005 RAB4AP20338 218 aa14.49□□□□□ -0.09
PSEN1-225ENST00000560005 SNRPEP62304 92 aaKnown RBP14.49□□□□□ -0.09
PSEN1-225ENST00000560005 BAGE3Q86Y29 109 aa14.49□□□□□ -0.09
PSEN1-225ENST00000560005 AMN1Q8IY45 258 aa14.49□□□□□ -0.09
PSEN1-225ENST00000560005 TMEM263Q8WUH6 116 aaKnown RBP14.49□□□□□ -0.09
PSEN1-225ENST00000560005 SMIM9A6NGZ8 99 aa14.48□□□□□ -0.09
PSEN1-225ENST00000560005 HOXA5P20719 270 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms