RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 XGP55808 180 aa8.43□□□□□ -1.06
SNX1-209ENST00000559961 EIF5AP63241 154 aaKnown RBP8.43□□□□□ -1.06
SNX1-209ENST00000559961 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
SNX1-209ENST00000559961 ZNF726P1Q15940 193 aa8.43□□□□□ -1.06
SNX1-209ENST00000559961 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
SNX1-209ENST00000559961 ZC2HC1AQ96GY0 325 aa8.43□□□□□ -1.06
SNX1-209ENST00000559961 TMSB15BA0A087X1C1 80 aa8.42□□□□□ -1.06
SNX1-209ENST00000559961 UMAD1C9J7I0 102 aa8.42□□□□□ -1.06
SNX1-209ENST00000559961 DNLZQ5SXM8 178 aa8.42□□□□□ -1.06
SNX1-209ENST00000559961 SFT2D1Q8WV19 159 aa8.42□□□□□ -1.06
SNX1-209ENST00000559961 KANTRA0A1W2PQU2 76 aa8.41□□□□□ -1.06
SNX1-209ENST00000559961 LRCOL1A6NCL2 159 aa8.41□□□□□ -1.06
SNX1-209ENST00000559961 TMEM262E9PQX1 116 aa8.41□□□□□ -1.06
SNX1-209ENST00000559961 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
SNX1-209ENST00000559961 Q6ZSN1 163 aa8.41□□□□□ -1.06
SNX1-209ENST00000559961 SFRP2Q96HF1 295 aa8.41□□□□□ -1.06
SNX1-209ENST00000559961 A0A087WWL8 130 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 TRBV10-1A0A0K0K1A3 114 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 TRBV6-1A0A0K0K1D8 114 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 PAGE4O60829 102 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 LTAP01374 205 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 ZNF674Q2M3X9 581 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 LINC01559Q495D7 138 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 COX8CQ7Z4L0 72 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 C14orf178Q8N769 122 aaPredicted RBP8.4□□□□□ -1.06
SNX1-209ENST00000559961 Q8N976 141 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 FAM213BQ8TBF2 198 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 SAMD10Q9BYL1 202 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 JPT2Q9H910 190 aa8.4□□□□□ -1.06
SNX1-209ENST00000559961 IGKV2D-24A0A075B6R9 120 aa8.39□□□□□ -1.07
SNX1-209ENST00000559961 A0A0D9SG52 128 aa8.39□□□□□ -1.07
SNX1-209ENST00000559961 C1QBP02746 253 aa8.39□□□□□ -1.07
SNX1-209ENST00000559961 SMIM17P0DL12 118 aa8.39□□□□□ -1.07
SNX1-209ENST00000559961 CRIP1P50238 77 aa8.39□□□□□ -1.07
SNX1-209ENST00000559961 PKIAP61925 76 aa8.39□□□□□ -1.07
SNX1-209ENST00000559961 Q0VG73 95 aa8.39□□□□□ -1.07
SNX1-209ENST00000559961 DAZ4Q86SG3 579 aaKnown RBP8.39□□□□□ -1.07
SNX1-209ENST00000559961 BAGE2Q86Y30 109 aa8.39□□□□□ -1.07
SNX1-209ENST00000559961 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
SNX1-209ENST00000559961 ZNF471Q9BX82 626 aaPredicted RBP8.39□□□□□ -1.07
SNX1-209ENST00000559961 DAZ3Q9NR90 486 aaKnown RBP8.39□□□□□ -1.07
SNX1-209ENST00000559961 RBFOX3A6NFN3 312 aa8.38□□□□□ -1.07
SNX1-209ENST00000559961 F5H697 171 aa8.38□□□□□ -1.07
SNX1-209ENST00000559961 TEX46H3BTG2 121 aa8.38□□□□□ -1.07
SNX1-209ENST00000559961 ZNF345Q14585 488 aa8.38□□□□□ -1.07
SNX1-209ENST00000559961 ZNF56Q15929 161 aa8.38□□□□□ -1.07
SNX1-209ENST00000559961 SPANXN1Q5VSR9 72 aa8.38□□□□□ -1.07
SNX1-209ENST00000559961 UFSP1Q6NVU6 142 aa8.38□□□□□ -1.07
SNX1-209ENST00000559961 CYTL1Q9NRR1 136 aa8.38□□□□□ -1.07
SNX1-209ENST00000559961 APOBP04114 4563 aaKnown RBP8.37□□□□□ -1.07
SNX1-209ENST00000559961 TRBV7-3A0A075B6L6 115 aa8.37□□□□□ -1.07
SNX1-209ENST00000559961 A0A1B0GV50 99 aa8.37□□□□□ -1.07
SNX1-209ENST00000559961 LECT2O14960 151 aa8.37□□□□□ -1.07
SNX1-209ENST00000559961 CRPP02741 224 aa8.37□□□□□ -1.07
SNX1-209ENST00000559961 PLA2G1BP04054 148 aaKnown RBP8.37□□□□□ -1.07
SNX1-209ENST00000559961 H2AFB1P0C5Y9 115 aa8.37□□□□□ -1.07
SNX1-209ENST00000559961 RAB4BP61018 213 aa8.37□□□□□ -1.07
SNX1-209ENST00000559961 KCNRGQ8N5I3 272 aa8.37□□□□□ -1.07
SNX1-209ENST00000559961 UBE2WQ96B02 151 aa8.37□□□□□ -1.07
SNX1-209ENST00000559961 DAZAP1Q96EP5 407 aaKnown RBP8.37□□□□□ -1.07
SNX1-209ENST00000559961 KLK12Q9UKR0 248 aa8.37□□□□□ -1.07
SNX1-209ENST00000559961 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.36□□□□□ -1.07
SNX1-209ENST00000559961 LINC00694P0DN24 101 aa8.36□□□□□ -1.07
SNX1-209ENST00000559961 C14orf177Q52M58 125 aa8.36□□□□□ -1.07
SNX1-209ENST00000559961 TMEM97Q5BJF2 176 aa8.36□□□□□ -1.07
SNX1-209ENST00000559961 EIF5AL1Q6IS14 154 aaKnown RBP8.36□□□□□ -1.07
SNX1-209ENST00000559961 PRR27Q6MZM9 219 aa8.36□□□□□ -1.07
SNX1-209ENST00000559961 NIT1Q86X76 327 aa8.36□□□□□ -1.07
SNX1-209ENST00000559961 MBD3L1Q8WWY6 194 aa8.36□□□□□ -1.07
SNX1-209ENST00000559961 BAALCQ8WXS3 180 aa8.36□□□□□ -1.07
SNX1-209ENST00000559961 HMSDA8MTL9 139 aa8.35□□□□□ -1.07
SNX1-209ENST00000559961 TMUB2Q71RG4 321 aa8.35□□□□□ -1.07
SNX1-209ENST00000559961 C1orf43Q9BWL3 253 aa8.35□□□□□ -1.07
SNX1-209ENST00000559961 SMLR1H3BR10 107 aa8.34□□□□□ -1.07
SNX1-209ENST00000559961 BCL2L11O43521 198 aa8.34□□□□□ -1.07
SNX1-209ENST00000559961 CXCL1P09341 107 aa8.34□□□□□ -1.07
SNX1-209ENST00000559961 UBE2D3P61077 147 aa8.34□□□□□ -1.07
SNX1-209ENST00000559961 UBE2D2P62837 147 aa8.34□□□□□ -1.07
SNX1-209ENST00000559961 HAMPP81172 84 aa8.34□□□□□ -1.07
SNX1-209ENST00000559961 Q8N3U1 123 aa8.34□□□□□ -1.07
SNX1-209ENST00000559961 CHCHD5Q9BSY4 110 aa8.34□□□□□ -1.07
SNX1-209ENST00000559961 TRBV6-8A0A0A6YYG3 113 aa8.33□□□□□ -1.08
SNX1-209ENST00000559961 SCO2A0A1W2PP80 73 aa8.33□□□□□ -1.08
SNX1-209ENST00000559961 XKRY2A2RUG3 117 aa8.33□□□□□ -1.08
SNX1-209ENST00000559961 J3QL48 77 aa8.33□□□□□ -1.08
SNX1-209ENST00000559961 SSTP61278 116 aa8.33□□□□□ -1.08
SNX1-209ENST00000559961 MANBALQ9NQG1 85 aa8.33□□□□□ -1.08
SNX1-209ENST00000559961 Q9UF83 564 aa8.33□□□□□ -1.08
SNX1-209ENST00000559961 G3V3Q6 166 aa8.32□□□□□ -1.08
SNX1-209ENST00000559961 H7C1H1 209 aa8.32□□□□□ -1.08
SNX1-209ENST00000559961 ANGP03950 147 aaKnown RBP8.32□□□□□ -1.08
SNX1-209ENST00000559961 OR5AL1P0C617 328 aa8.32□□□□□ -1.08
SNX1-209ENST00000559961 RAB5CP51148 216 aa8.32□□□□□ -1.08
SNX1-209ENST00000559961 RPS20P60866 119 aaKnown RBP8.32□□□□□ -1.08
SNX1-209ENST00000559961 OR10G8Q8NGN5 311 aa8.32□□□□□ -1.08
SNX1-209ENST00000559961 AP1S3Q96PC3 154 aa8.32□□□□□ -1.08
SNX1-209ENST00000559961 TPPP3Q9BW30 176 aa8.32□□□□□ -1.08
SNX1-209ENST00000559961 BIN3Q9NQY0 253 aa8.32□□□□□ -1.08
SNX1-209ENST00000559961 IFNA1P01562 189 aa8.31□□□□□ -1.08
SNX1-209ENST00000559961 RPL35P42766 123 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms