RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 A0A087WWL8 130 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 TRGV1A0A0A0MS02 117 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 IGHV3-73A0A0B4J1V6 119 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 A8MWL6 223 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 UBE2CO00762 179 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 PPP1R2P9O14990 202 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 SNAI2O43623 268 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 GAGE7O76087 117 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 GAGE12FP0CL80 117 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 GAGE12GP0CL81 117 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 GAGE12IP0CL82 117 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 S100A1P23297 94 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 CTRLP40313 264 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 CAMPP49913 170 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 ELOBQ15370 118 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 FAM222AQ5U5X8 452 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 Q6ZWC4 215 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 TMEM256Q8N2U0 113 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 TMEM263Q8WUH6 116 aaKnown RBP3.71□□□□□ -1.82
SPG11-220ENST00000559933 C16orf74Q96GX8 76 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 B9D2Q9BPU9 175 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 C20orf144Q9BQM9 153 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 LINC00467Q9BRT7 94 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 SCRT2Q9NQ03 307 aa3.71□□□□□ -1.82
SPG11-220ENST00000559933 KMT2CQ8NEZ4 4911 aaKnown RBP3.71□□□□□ -1.82
SPG11-220ENST00000559933 TRAV26-2A0A0B4J265 109 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 A0A1B0GXF2 115 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 SNURFLB1AK76 121 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 SMKR1H3BMG3 65 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 GAS8-AS1O95177 125 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 DEFB130BP0DP73 79 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 DEFB130AP0DP74 79 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 NTF3P20783 257 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 RPS20P60866 119 aaKnown RBP3.7□□□□□ -1.82
SPG11-220ENST00000559933 SPANXN1Q5VSR9 72 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 POM121L12Q8N7R1 296 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 NTN5Q8WTR8 489 aaPredicted RBP3.7□□□□□ -1.82
SPG11-220ENST00000559933 KCNS1Q96KK3 526 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 IMMP2LQ96T52 175 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 CTDSP1Q9GZU7 261 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 NAT8BQ9UHF3 227 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 PHLDA3Q9Y5J5 127 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 STARD9Q9P2P6 4700 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 NACAE9PAV3 2078 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 STAB2Q8WWQ8 2551 aa3.7□□□□□ -1.82
SPG11-220ENST00000559933 A0A1B0GUT8 65 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 XKRY2A2RUG3 117 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 COLCA2A8K830 154 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 M0R2P5 195 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 NXPH4O95158 308 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 NCR2O95944 276 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 MGPP08493 103 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 OR5AL1P0C617 328 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 P0DMU3 169 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 FAM231AP0DMU4 169 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 FAM231CP0DMU5 169 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 MIFP14174 115 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 HTN3P15516 51 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 EVI2AP22794 236 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 S100PP25815 95 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 NANOS2P60321 138 aaKnown RBP3.69□□□□□ -1.82
SPG11-220ENST00000559933 HBBP68871 147 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 TWIST1Q15672 202 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 KIAA1644Q3SXP7 199 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 ZNF876PQ49A33 203 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 DNLZQ5SXM8 178 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 FAM74A4Q5TZK3 123 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 KCNIP4Q6PIL6 250 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 TMEM136Q6ZRR5 245 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 AMN1Q8IY45 258 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 C14orf178Q8N769 122 aaPredicted RBP3.69□□□□□ -1.82
SPG11-220ENST00000559933 DEFB104AQ8WTQ1 72 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 ZNF479Q96JC4 524 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 GFRA4Q9GZZ7 299 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 SMCO4Q9NRQ5 59 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 Q9UF83 564 aa3.69□□□□□ -1.82
SPG11-220ENST00000559933 RYR1P21817 5038 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 PCLOQ9Y6V0 5065 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 TRGV2A0A075B6R0 118 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 LOC100131303A0A0U1RQF7 123 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 SMIM9A6NGZ8 99 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 GATA1P15976 413 aaPredicted RBP3.68□□□□□ -1.82
SPG11-220ENST00000559933 RAB4BP61018 213 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 DAZ2Q13117 558 aaKnown RBP3.68□□□□□ -1.82
SPG11-220ENST00000559933 SLAQ13239 276 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 ZNF56Q15929 161 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 C12orf74Q32Q52 190 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 CFAP126Q5VTH2 177 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 UFSP1Q6NVU6 142 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 Q6ZTC4 211 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 ZFP82Q8N141 532 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 RNF185Q96GF1 192 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 FAM210BQ96KR6 192 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 CNFNQ9BYD5 112 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 TP53TG1Q9Y2A0 90 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 KIF25-AS1Q9Y6Z4 181 aa3.68□□□□□ -1.82
SPG11-220ENST00000559933 PLECQ15149 4684 aaKnown RBP3.67□□□□□ -1.82
SPG11-220ENST00000559933 IGHV4-4A0A075B6R2 117 aa3.67□□□□□ -1.82
SPG11-220ENST00000559933 A0A0J9YY99 117 aa3.67□□□□□ -1.82
SPG11-220ENST00000559933 FAM231BA6NCW3 169 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms