RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 FXYD5Q96DB9 178 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 NUDT11Q96G61 164 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 FMC1Q96HJ9 113 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 HIST1H2BLQ99880 126 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 TMEM208Q9BTX3 173 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 V9GYV3 84 aa4.01□□□□□ -1.77
USP3-215ENST00000559771 SERTM2A0A1B0GWG4 89 aa4□□□□□ -1.77
USP3-215ENST00000559771 PCP4L1A6NKN8 68 aa4□□□□□ -1.77
USP3-215ENST00000559771 PRAC2D3DTV9 90 aa4□□□□□ -1.77
USP3-215ENST00000559771 TSTD3H0UI37 97 aa4□□□□□ -1.77
USP3-215ENST00000559771 K7EN84 100 aa4□□□□□ -1.77
USP3-215ENST00000559771 PEX7O00628 323 aa4□□□□□ -1.77
USP3-215ENST00000559771 HLA-DQA1P01909 254 aa4□□□□□ -1.77
USP3-215ENST00000559771 ATP5G1P05496 136 aa4□□□□□ -1.77
USP3-215ENST00000559771 NBEAP1P0C6P0 100 aa4□□□□□ -1.77
USP3-215ENST00000559771 FABP4P15090 132 aa4□□□□□ -1.77
USP3-215ENST00000559771 PKIAP61925 76 aa4□□□□□ -1.77
USP3-215ENST00000559771 HIST1H1AQ02539 215 aaPredicted RBP4□□□□□ -1.77
USP3-215ENST00000559771 PDE6HQ13956 83 aa4□□□□□ -1.77
USP3-215ENST00000559771 PSG3Q16557 428 aa4□□□□□ -1.77
USP3-215ENST00000559771 IQCJQ1A5X6 159 aa4□□□□□ -1.77
USP3-215ENST00000559771 ESRGQ1W209 222 aa4□□□□□ -1.77
USP3-215ENST00000559771 PYY3Q5JQD4 70 aa4□□□□□ -1.77
USP3-215ENST00000559771 OR10J3Q5JRS4 329 aa4□□□□□ -1.77
USP3-215ENST00000559771 IBA57Q5T440 356 aaKnown RBP4□□□□□ -1.77
USP3-215ENST00000559771 FAM162BQ5T6X4 162 aa4□□□□□ -1.77
USP3-215ENST00000559771 MORN5Q5VZ52 161 aa4□□□□□ -1.77
USP3-215ENST00000559771 BAGE2Q86Y30 109 aa4□□□□□ -1.77
USP3-215ENST00000559771 GPR82Q96P67 336 aa4□□□□□ -1.77
USP3-215ENST00000559771 LINC01587Q99440 93 aa4□□□□□ -1.77
USP3-215ENST00000559771 ATG101Q9BSB4 218 aa4□□□□□ -1.77
USP3-215ENST00000559771 GFRA4Q9GZZ7 299 aa4□□□□□ -1.77
USP3-215ENST00000559771 OTORQ9NRC9 128 aa4□□□□□ -1.77
USP3-215ENST00000559771 EPDR1Q9UM22 224 aa4□□□□□ -1.77
USP3-215ENST00000559771 HIGD1AQ9Y241 93 aa4□□□□□ -1.77
USP3-215ENST00000559771 FAT1Q14517 4588 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 TRAV26-1A0A087WT03 109 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 K7EQM0 130 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 SLC17A3O00476 420 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 GATCO43716 136 aaKnown RBP3.99□□□□□ -1.77
USP3-215ENST00000559771 IGLV2-8P01709 118 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 SNRPCP09234 159 aaKnown RBP3.99□□□□□ -1.77
USP3-215ENST00000559771 RPL7P18124 248 aaKnown RBP3.99□□□□□ -1.77
USP3-215ENST00000559771 CCL18P55774 89 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 UBE2G1P62253 170 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 LBHQ53QV2 105 aaPredicted RBP3.99□□□□□ -1.77
USP3-215ENST00000559771 Q6ZRN7 208 aaPredicted RBP3.99□□□□□ -1.77
USP3-215ENST00000559771 SPATA12Q7Z6I5 190 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 BPIFA4PQ86YQ2 179 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 TMEM256Q8N2U0 113 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 ZNF738Q8NE65 137 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 TSKUQ8WUA8 353 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 TMEM263Q8WUH6 116 aaKnown RBP3.99□□□□□ -1.77
USP3-215ENST00000559771 C16orf74Q96GX8 76 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 VSIG2Q96IQ7 327 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 UPK3BQ9BT76 320 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 MLST8Q9BVC4 326 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 Q9H3A6 140 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 Q9H8V8 135 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 NOP10Q9NPE3 64 aaKnown RBP3.99□□□□□ -1.77
USP3-215ENST00000559771 ZNF331Q9NQX6 463 aaPredicted RBP3.99□□□□□ -1.77
USP3-215ENST00000559771 ZNF492Q9P255 531 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 NAT8BQ9UHF3 227 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 ZFP30Q9Y2G7 519 aa3.99□□□□□ -1.77
USP3-215ENST00000559771 TIMM8BQ9Y5J9 83 aaPredicted RBP3.99□□□□□ -1.77
USP3-215ENST00000559771 VPS13BQ7Z7G8 4022 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 A0A0J9YY99 117 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 A0A1B0GW15 77 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 A8MWL6 223 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 H3BTX0 84 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 ZNF253O75346 499 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 LTAP01374 205 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 IGLC2P0DOY2 106 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 HTN1P15515 57 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 CRISP2P16562 243 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 BTF3P20290 206 aaKnown RBP3.98□□□□□ -1.77
USP3-215ENST00000559771 RAB4AP20338 218 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 CDKN1BP46527 198 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 GFI1BQ5VTD9 330 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 ZNF493Q6ZR52 646 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 CMTM2Q8TAZ6 248 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 SCRT2Q9NQ03 307 aa3.98□□□□□ -1.77
USP3-215ENST00000559771 A0A096LPF7 62 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 TRAV5A0A0B4J249 113 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 PGPA6NDG6 321 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 PGPEP1LA6NFU8 196 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 SNURFLB1AK76 121 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 H3BNG1 76 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 TCRAP04437 139 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 SLC25A5P05141 298 aaKnown RBP3.97□□□□□ -1.77
USP3-215ENST00000559771 CT45A10P0DMU9 189 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 PYYP10082 97 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 GZMBP10144 247 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 MGST1P10620 155 aaKnown RBP3.97□□□□□ -1.77
USP3-215ENST00000559771 FUSP35637 526 aaKnown RBP eCLIP3.97□□□□□ -1.77
USP3-215ENST00000559771 FOXA3P55318 350 aaPredicted RBP3.97□□□□□ -1.77
USP3-215ENST00000559771 OR5I1Q13606 314 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 Q6AWC8 147 aa3.97□□□□□ -1.77
USP3-215ENST00000559771 TMEM136Q6ZRR5 245 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms