RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 C10orf126Q8N4M7 172 aa8.55□□□□□ -1.04
LRRC28-214ENST00000559433 MLST8Q9BVC4 326 aa8.55□□□□□ -1.04
LRRC28-214ENST00000559433 SAMD10Q9BYL1 202 aa8.55□□□□□ -1.04
LRRC28-214ENST00000559433 SCRT2Q9NQ03 307 aa8.55□□□□□ -1.04
LRRC28-214ENST00000559433 MSRB1Q9NZV6 116 aa8.55□□□□□ -1.04
LRRC28-214ENST00000559433 TMA7Q9Y2S6 64 aaKnown RBP8.55□□□□□ -1.04
LRRC28-214ENST00000559433 TNFRSF18Q9Y5U5 241 aa8.55□□□□□ -1.04
LRRC28-214ENST00000559433 IGHV3-38A0A0C4DH36 116 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 GAGE12JA6NER3 117 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 RPL19P84098 196 aaKnown RBP8.54□□□□□ -1.04
LRRC28-214ENST00000559433 GAGE1Q13065 139 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 GAGE4Q13068 117 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 GAGE5Q13069 117 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 GAGE13Q4V321 117 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 PRR27Q6MZM9 219 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 ATP6V0E2Q8NHE4 81 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 C11orf52Q96A22 123 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 DERL1Q9BUN8 251 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
LRRC28-214ENST00000559433 A0A087WWL8 130 aa8.53□□□□□ -1.04
LRRC28-214ENST00000559433 IFNA1P01562 189 aa8.53□□□□□ -1.04
LRRC28-214ENST00000559433 LELP1Q5T871 98 aa8.53□□□□□ -1.04
LRRC28-214ENST00000559433 C14orf178Q8N769 122 aaPredicted RBP8.53□□□□□ -1.04
LRRC28-214ENST00000559433 SFRP2Q96HF1 295 aa8.53□□□□□ -1.04
LRRC28-214ENST00000559433 RYR1P21817 5038 aa8.52□□□□□ -1.05
LRRC28-214ENST00000559433 PSCAO43653 123 aa8.52□□□□□ -1.05
LRRC28-214ENST00000559433 CXCL1P09341 107 aa8.52□□□□□ -1.05
LRRC28-214ENST00000559433 LINC00694P0DN24 101 aa8.52□□□□□ -1.05
LRRC28-214ENST00000559433 MEF2BQ02080 365 aaPredicted RBP8.52□□□□□ -1.05
LRRC28-214ENST00000559433 CENPWQ5EE01 88 aa8.52□□□□□ -1.05
LRRC28-214ENST00000559433 LINC01556Q5JQF7 62 aa8.52□□□□□ -1.05
LRRC28-214ENST00000559433 C9orf62Q8N4C0 152 aa8.52□□□□□ -1.05
LRRC28-214ENST00000559433 PDE6DO43924 150 aa8.51□□□□□ -1.05
LRRC28-214ENST00000559433 BCL2P10415 239 aa8.51□□□□□ -1.05
LRRC28-214ENST00000559433 KRTAP10-2P60368 255 aa8.51□□□□□ -1.05
LRRC28-214ENST00000559433 OR10AG1Q8NH19 301 aa8.51□□□□□ -1.05
LRRC28-214ENST00000559433 Q9UF83 564 aa8.51□□□□□ -1.05
LRRC28-214ENST00000559433 RAB19A4D1S5 217 aa8.5□□□□□ -1.05
LRRC28-214ENST00000559433 CDK2AP2O75956 126 aa8.5□□□□□ -1.05
LRRC28-214ENST00000559433 IGHV3-30P01768 117 aa8.5□□□□□ -1.05
LRRC28-214ENST00000559433 IGHV3-33P01772 117 aa8.5□□□□□ -1.05
LRRC28-214ENST00000559433 IGHV3-30-3P0DP02 117 aa8.5□□□□□ -1.05
LRRC28-214ENST00000559433 IGHV3-30-5P0DP03 117 aa8.5□□□□□ -1.05
LRRC28-214ENST00000559433 GNG4P50150 75 aa8.5□□□□□ -1.05
LRRC28-214ENST00000559433 LRP1BQ9NZR2 4599 aa8.49□□□□□ -1.05
LRRC28-214ENST00000559433 MUC21A0A0G2JKD1 596 aa8.49□□□□□ -1.05
LRRC28-214ENST00000559433 MUC21A0A140T8X8 626 aa8.49□□□□□ -1.05
LRRC28-214ENST00000559433 SPANXN1Q5VSR9 72 aa8.49□□□□□ -1.05
LRRC28-214ENST00000559433 DAZAP1Q96EP5 407 aaKnown RBP8.49□□□□□ -1.05
LRRC28-214ENST00000559433 MED9Q9NWA0 146 aa8.49□□□□□ -1.05
LRRC28-214ENST00000559433 VAX2Q9UIW0 290 aa8.49□□□□□ -1.05
LRRC28-214ENST00000559433 DNAH5Q8TE73 4624 aa8.49□□□□□ -1.05
LRRC28-214ENST00000559433 A0A087WWC5 75 aa8.48□□□□□ -1.05
LRRC28-214ENST00000559433 SNAI2O43623 268 aa8.48□□□□□ -1.05
LRRC28-214ENST00000559433 IGLV2-8P01709 118 aa8.48□□□□□ -1.05
LRRC28-214ENST00000559433 OR5AL1P0C617 328 aa8.48□□□□□ -1.05
LRRC28-214ENST00000559433 TAGLN2P37802 199 aaKnown RBP8.48□□□□□ -1.05
LRRC28-214ENST00000559433 ZNF56Q15929 161 aa8.48□□□□□ -1.05
LRRC28-214ENST00000559433 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
LRRC28-214ENST00000559433 SMIM12Q96EX1 92 aa8.48□□□□□ -1.05
LRRC28-214ENST00000559433 SSBP4Q9BWG4 385 aaPredicted RBP8.48□□□□□ -1.05
LRRC28-214ENST00000559433 A0A087WTM6 91 aa8.47□□□□□ -1.05
LRRC28-214ENST00000559433 TRBV10-1A0A0K0K1A3 114 aa8.47□□□□□ -1.05
LRRC28-214ENST00000559433 IBA57-AS1B1ANH7 110 aa8.47□□□□□ -1.05
LRRC28-214ENST00000559433 SSTP61278 116 aa8.47□□□□□ -1.05
LRRC28-214ENST00000559433 ALKAL2Q6UX46 152 aa8.47□□□□□ -1.05
LRRC28-214ENST00000559433 MAPKAPK5-AS1Q8N8E1 139 aa8.47□□□□□ -1.05
LRRC28-214ENST00000559433 OR2D3Q8NGH3 330 aa8.47□□□□□ -1.05
LRRC28-214ENST00000559433 TPPP3Q9BW30 176 aa8.47□□□□□ -1.05
LRRC28-214ENST00000559433 Q9HAA7 133 aa8.47□□□□□ -1.05
LRRC28-214ENST00000559433 URGCP-MRPS24S4R325 110 aa8.47□□□□□ -1.05
LRRC28-214ENST00000559433 TRBV20OR9-2A0A075B6H5 130 aa8.46□□□□□ -1.06
LRRC28-214ENST00000559433 C19orf71A6NCJ1 209 aa8.46□□□□□ -1.06
LRRC28-214ENST00000559433 GZMBP10144 247 aa8.46□□□□□ -1.06
LRRC28-214ENST00000559433 RPS20P60866 119 aaKnown RBP8.46□□□□□ -1.06
LRRC28-214ENST00000559433 RAB4BP61018 213 aa8.46□□□□□ -1.06
LRRC28-214ENST00000559433 RPL36AP83881 106 aaKnown RBP8.46□□□□□ -1.06
LRRC28-214ENST00000559433 CDPF1Q6NVV7 123 aa8.46□□□□□ -1.06
LRRC28-214ENST00000559433 KCNIP4Q6PIL6 250 aa8.46□□□□□ -1.06
LRRC28-214ENST00000559433 Q8N3U1 123 aa8.46□□□□□ -1.06
LRRC28-214ENST00000559433 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.46□□□□□ -1.06
LRRC28-214ENST00000559433 RPL36ALQ969Q0 106 aaKnown RBP8.46□□□□□ -1.06
LRRC28-214ENST00000559433 TM2D2Q9BX73 214 aa8.46□□□□□ -1.06
LRRC28-214ENST00000559433 BIN3Q9NQY0 253 aa8.46□□□□□ -1.06
LRRC28-214ENST00000559433 PCLOQ9Y6V0 5065 aa8.46□□□□□ -1.06
LRRC28-214ENST00000559433 TRBV7-3A0A075B6L6 115 aa8.45□□□□□ -1.06
LRRC28-214ENST00000559433 P01737 135 aa8.45□□□□□ -1.06
LRRC28-214ENST00000559433 SMIM17P0DL12 118 aa8.45□□□□□ -1.06
LRRC28-214ENST00000559433 FUSP35637 526 aaKnown RBP eCLIP8.45□□□□□ -1.06
LRRC28-214ENST00000559433 BLOC1S1P78537 153 aa8.45□□□□□ -1.06
LRRC28-214ENST00000559433 LAGE3Q14657 143 aa8.45□□□□□ -1.06
LRRC28-214ENST00000559433 TOR2AQ5JU69 321 aa8.45□□□□□ -1.06
LRRC28-214ENST00000559433 FER1L6-AS1Q8NA97 138 aa8.45□□□□□ -1.06
LRRC28-214ENST00000559433 AP1S3Q96PC3 154 aa8.45□□□□□ -1.06
LRRC28-214ENST00000559433 KRTAP17-1Q9BYP8 105 aa8.45□□□□□ -1.06
LRRC28-214ENST00000559433 A0A1B0GVG6 124 aa8.44□□□□□ -1.06
LRRC28-214ENST00000559433 XKRY2A2RUG3 117 aa8.44□□□□□ -1.06
LRRC28-214ENST00000559433 RBFOX3A6NFN3 312 aa8.44□□□□□ -1.06
LRRC28-214ENST00000559433 F5H697 171 aa8.44□□□□□ -1.06
LRRC28-214ENST00000559433 IGLC6P0CF74 106 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms