RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 M0R381 172 aa10.39□□□□□ -0.75
SNRPA1-207ENST00000559309 GATD1Q8NB37 220 aa10.39□□□□□ -0.75
SNRPA1-207ENST00000559309 PHLDA1Q8WV24 401 aaPredicted RBP10.39□□□□□ -0.75
SNRPA1-207ENST00000559309 MUC21A0A0G2JKD1 596 aa10.38□□□□□ -0.75
SNRPA1-207ENST00000559309 MUC21A0A140T8X8 626 aa10.38□□□□□ -0.75
SNRPA1-207ENST00000559309 A0A1B0GUT8 65 aa10.38□□□□□ -0.75
SNRPA1-207ENST00000559309 SNAPINO95295 136 aa10.38□□□□□ -0.75
SNRPA1-207ENST00000559309 GATA1P15976 413 aaPredicted RBP10.38□□□□□ -0.75
SNRPA1-207ENST00000559309 SPANXN1Q5VSR9 72 aa10.38□□□□□ -0.75
SNRPA1-207ENST00000559309 OR4C5Q8NGB2 326 aa10.38□□□□□ -0.75
SNRPA1-207ENST00000559309 FAM210BQ96KR6 192 aa10.38□□□□□ -0.75
SNRPA1-207ENST00000559309 PGLYRP4Q96LB8 373 aa10.38□□□□□ -0.75
SNRPA1-207ENST00000559309 DEFB131BA0A096LNP1 70 aa10.37□□□□□ -0.75
SNRPA1-207ENST00000559309 H3BNG1 76 aa10.37□□□□□ -0.75
SNRPA1-207ENST00000559309 CEMP1Q6PRD7 247 aaPredicted RBP10.37□□□□□ -0.75
SNRPA1-207ENST00000559309 ATRAIDQ6UW56 229 aa10.37□□□□□ -0.75
SNRPA1-207ENST00000559309 BIRC6Q9NR09 4857 aa10.36□□□□□ -0.75
SNRPA1-207ENST00000559309 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
SNRPA1-207ENST00000559309 DNAH1Q9P2D7 4330 aa10.36□□□□□ -0.75
SNRPA1-207ENST00000559309 TRAV9-1A0A075B6T8 112 aa10.36□□□□□ -0.75
SNRPA1-207ENST00000559309 RHODO00212 210 aa10.36□□□□□ -0.75
SNRPA1-207ENST00000559309 VSIG2Q96IQ7 327 aa10.36□□□□□ -0.75
SNRPA1-207ENST00000559309 AP1S3Q96PC3 154 aa10.36□□□□□ -0.75
SNRPA1-207ENST00000559309 LYSTQ99698 3801 aa10.36□□□□□ -0.75
SNRPA1-207ENST00000559309 TPPP3Q9BW30 176 aa10.36□□□□□ -0.75
SNRPA1-207ENST00000559309 A0A1B0GW15 77 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 TRBV6-4A0A1B0GX49 114 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 NUPR2A6NF83 97 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 IGHV3-53P01767 116 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 EVI2AP22794 236 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 CRYBA4P53673 196 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 FAM3BP58499 235 aaPredicted RBP10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 SLAQ13239 276 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 Q6ZSN1 163 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 ATP5L2Q7Z4Y8 100 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 YPEL4Q96NS1 127 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 TMEM191AQ9H0A3 160 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 PRO0255Q9UI72 69 aa10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 EPPK1P58107 5090 aaKnown RBP10.35□□□□□ -0.75
SNRPA1-207ENST00000559309 TRGC1P0CF51 173 aa10.34□□□□□ -0.75
SNRPA1-207ENST00000559309 TWIST1Q15672 202 aa10.34□□□□□ -0.75
SNRPA1-207ENST00000559309 C14orf178Q8N769 122 aaPredicted RBP10.34□□□□□ -0.75
SNRPA1-207ENST00000559309 A0A087WWL8 130 aa10.33□□□□□ -0.76
SNRPA1-207ENST00000559309 LINC00694P0DN24 101 aa10.33□□□□□ -0.76
SNRPA1-207ENST00000559309 CASC10Q5T4H9 136 aa10.33□□□□□ -0.76
SNRPA1-207ENST00000559309 SLC25A29Q8N8R3 303 aa10.33□□□□□ -0.76
SNRPA1-207ENST00000559309 DPH3P1Q9H4G8 78 aa10.33□□□□□ -0.76
SNRPA1-207ENST00000559309 RPS10P5Q9NQ39 176 aa10.33□□□□□ -0.76
SNRPA1-207ENST00000559309 HHLA3Q9XRX5 114 aa10.33□□□□□ -0.76
SNRPA1-207ENST00000559309 F5H768 121 aa10.32□□□□□ -0.76
SNRPA1-207ENST00000559309 TCTAP57738 103 aa10.32□□□□□ -0.76
SNRPA1-207ENST00000559309 RAB4BP61018 213 aa10.32□□□□□ -0.76
SNRPA1-207ENST00000559309 RIGQ13278 110 aa10.32□□□□□ -0.76
SNRPA1-207ENST00000559309 TMEM88Q6PEY1 159 aa10.32□□□□□ -0.76
SNRPA1-207ENST00000559309 FRZBQ92765 325 aa10.32□□□□□ -0.76
SNRPA1-207ENST00000559309 RNF185Q96GF1 192 aa10.32□□□□□ -0.76
SNRPA1-207ENST00000559309 BTF3L4Q96K17 158 aa10.32□□□□□ -0.76
SNRPA1-207ENST00000559309 APLNQ9ULZ1 77 aa10.32□□□□□ -0.76
SNRPA1-207ENST00000559309 TRAV26-1A0A087WT03 109 aa10.31□□□□□ -0.76
SNRPA1-207ENST00000559309 RASL11AQ6T310 242 aa10.31□□□□□ -0.76
SNRPA1-207ENST00000559309 BORCS7Q96B45 105 aa10.31□□□□□ -0.76
SNRPA1-207ENST00000559309 ALMS1Q8TCU4 4167 aa10.31□□□□□ -0.76
SNRPA1-207ENST00000559309 TRGV4A0A0C4DH28 118 aa10.3□□□□□ -0.76
SNRPA1-207ENST00000559309 M0QY20 66 aa10.3□□□□□ -0.76
SNRPA1-207ENST00000559309 HTN3P15516 51 aa10.3□□□□□ -0.76
SNRPA1-207ENST00000559309 SSTP61278 116 aa10.3□□□□□ -0.76
SNRPA1-207ENST00000559309 HBBP68871 147 aa10.3□□□□□ -0.76
SNRPA1-207ENST00000559309 ELOBQ15370 118 aa10.3□□□□□ -0.76
SNRPA1-207ENST00000559309 FAM74A4Q5TZK3 123 aa10.3□□□□□ -0.76
SNRPA1-207ENST00000559309 Q9UF83 564 aa10.3□□□□□ -0.76
SNRPA1-207ENST00000559309 TRBV24-1A0A075B6N3 115 aa10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 IGHV3-73A0A0B4J1V6 119 aa10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 TRBV10-1A0A0K0K1A3 114 aa10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 K7EQD1 137 aa10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 RAB4AP20338 218 aa10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 RHOHQ15669 191 aa10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 FAM104BQ5XKR9 115 aa10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 MRPL54Q6P161 138 aaKnown RBP10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 KCNIP4Q6PIL6 250 aa10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 C15orf53Q8NAA6 179 aa10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 KLK5Q9Y337 293 aaPredicted RBP10.29□□□□□ -0.76
SNRPA1-207ENST00000559309 A0A096LPF7 62 aa10.28□□□□□ -0.76
SNRPA1-207ENST00000559309 PAX4O43316 350 aa10.28□□□□□ -0.76
SNRPA1-207ENST00000559309 SUMO4Q6EEV6 95 aa10.28□□□□□ -0.76
SNRPA1-207ENST00000559309 ZFAND6Q6FIF0 208 aa10.28□□□□□ -0.76
SNRPA1-207ENST00000559309 S100A8P05109 93 aa10.27□□□□□ -0.77
SNRPA1-207ENST00000559309 SMIM17P0DL12 118 aa10.27□□□□□ -0.77
SNRPA1-207ENST00000559309 A0A0J9YY99 117 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 LOC100131303A0A0U1RQF7 123 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 IGLL5B9A064 214 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 ATP6V1G1O75348 118 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 S100PP25815 95 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 CAMPP49913 170 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 TMEM136Q6ZRR5 245 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 SMIM15Q7Z3B0 74 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 AMN1Q8IY45 258 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 URGCP-MRPS24S4R325 110 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 DNAH6Q9C0G6 4158 aa10.26□□□□□ -0.77
SNRPA1-207ENST00000559309 TRBV6-5A0A0K0K1A5 114 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms