RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 KRTAP4-6Q9BYQ5 205 aa6.75□□□□□ -1.33
SPG11-214ENST00000558989 A0A1W2PRE2 83 aa6.74□□□□□ -1.33
SPG11-214ENST00000558989 SPINK4O60575 86 aa6.74□□□□□ -1.33
SPG11-214ENST00000558989 SFTA3P0C7M3 94 aa6.74□□□□□ -1.33
SPG11-214ENST00000558989 SRSF9Q13242 221 aaKnown RBP eCLIP6.74□□□□□ -1.33
SPG11-214ENST00000558989 LINC00612Q8N6U2 182 aa6.74□□□□□ -1.33
SPG11-214ENST00000558989 C15orf53Q8NAA6 179 aa6.74□□□□□ -1.33
SPG11-214ENST00000558989 SFT2D1Q8WV19 159 aa6.74□□□□□ -1.33
SPG11-214ENST00000558989 LINC00467Q9BRT7 94 aa6.74□□□□□ -1.33
SPG11-214ENST00000558989 LENEPQ9Y5L5 61 aa6.74□□□□□ -1.33
SPG11-214ENST00000558989 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
SPG11-214ENST00000558989 TRAV21A0A0B4J279 112 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 A0A1B0GV72 72 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 A0A1B0GVG6 124 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 GAGE12JA6NER3 117 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 IGLV2-11P01706 119 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 TYMSP04818 313 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 ZFP69Q49AA0 526 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 IBA57Q5T440 356 aaKnown RBP6.73□□□□□ -1.33
SPG11-214ENST00000558989 STOML3Q8TAV4 291 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 A0A087WZ39 114 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 PEX7O00628 323 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 OXTP01178 125 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 SEC11BP0C7V7 166 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 TPT1P13693 172 aaKnown RBP6.73□□□□□ -1.33
SPG11-214ENST00000558989 LGALSLQ3ZCW2 172 aaPredicted RBP6.73□□□□□ -1.33
SPG11-214ENST00000558989 Q6ZVQ6 151 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 C11orf21Q9P2W6 132 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 ARL2-SNX15V9GYD0 113 aa6.73□□□□□ -1.33
SPG11-214ENST00000558989 DNAH6Q9C0G6 4158 aa6.72□□□□□ -1.33
SPG11-214ENST00000558989 A0A096LPF7 62 aa6.72□□□□□ -1.33
SPG11-214ENST00000558989 C9JCJ5 164 aa6.72□□□□□ -1.33
SPG11-214ENST00000558989 FAM19A1Q7Z5A9 133 aa6.72□□□□□ -1.33
SPG11-214ENST00000558989 SDF2L1Q9HCN8 221 aa6.72□□□□□ -1.33
SPG11-214ENST00000558989 DNAH10Q8IVF4 4471 aa6.72□□□□□ -1.33
SPG11-214ENST00000558989 IGHV3-16A0A0C4DH30 117 aa6.71□□□□□ -1.33
SPG11-214ENST00000558989 H2AFB1P0C5Y9 115 aa6.71□□□□□ -1.33
SPG11-214ENST00000558989 UBE2G1P62253 170 aa6.71□□□□□ -1.33
SPG11-214ENST00000558989 EIF5AP63241 154 aaKnown RBP6.71□□□□□ -1.33
SPG11-214ENST00000558989 RPL19P84098 196 aaKnown RBP6.71□□□□□ -1.33
SPG11-214ENST00000558989 Q86TA4 180 aa6.71□□□□□ -1.33
SPG11-214ENST00000558989 Q9HAA7 133 aa6.71□□□□□ -1.33
SPG11-214ENST00000558989 LINC00588Q9Y4M8 146 aa6.71□□□□□ -1.33
SPG11-214ENST00000558989 TRGV4A0A0C4DH28 118 aa6.71□□□□□ -1.34
SPG11-214ENST00000558989 hDV102S1A0JD36 115 aa6.71□□□□□ -1.34
SPG11-214ENST00000558989 AKR1C3P42330 323 aa6.71□□□□□ -1.34
SPG11-214ENST00000558989 CCL18P55774 89 aa6.71□□□□□ -1.34
SPG11-214ENST00000558989 TCTE3Q8IZS6 198 aa6.71□□□□□ -1.34
SPG11-214ENST00000558989 VSIG2Q96IQ7 327 aa6.71□□□□□ -1.34
SPG11-214ENST00000558989 BIRC6Q9NR09 4857 aa6.7□□□□□ -1.34
SPG11-214ENST00000558989 IGHV3-73A0A0B4J1V6 119 aa6.7□□□□□ -1.34
SPG11-214ENST00000558989 UMAD1C9J7I0 102 aa6.7□□□□□ -1.34
SPG11-214ENST00000558989 PAX4O43316 350 aa6.7□□□□□ -1.34
SPG11-214ENST00000558989 PFN1P07737 140 aaKnown RBP6.7□□□□□ -1.34
SPG11-214ENST00000558989 OR10J3Q5JRS4 329 aa6.7□□□□□ -1.34
SPG11-214ENST00000558989 KCNS1Q96KK3 526 aa6.7□□□□□ -1.34
SPG11-214ENST00000558989 TMSB15BA0A087X1C1 80 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 SCO2A0A1W2PP80 73 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 C1QBP02746 253 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 CCL20P78556 96 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 FHL2Q14192 279 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 ESRGQ1W209 222 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 LGALS9BQ3B8N2 356 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 TDRG1Q3Y452 100 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 RNF212Q495C1 297 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 MBD3L1Q8WWY6 194 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 HIST1H2BAQ96A08 127 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 ZC2HC1AQ96GY0 325 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 GRIFINA4D1Z8 144 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 M0R2P5 195 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 NKX6-2Q9C056 277 aaPredicted RBP6.69□□□□□ -1.34
SPG11-214ENST00000558989 GNG13Q9P2W3 67 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 HHLA3Q9XRX5 114 aa6.69□□□□□ -1.34
SPG11-214ENST00000558989 IGKV3D-20A0A0C4DH25 116 aa6.68□□□□□ -1.34
SPG11-214ENST00000558989 S100A4P26447 101 aaKnown RBP6.68□□□□□ -1.34
SPG11-214ENST00000558989 GAGE1Q13065 139 aa6.68□□□□□ -1.34
SPG11-214ENST00000558989 GAGE4Q13068 117 aa6.68□□□□□ -1.34
SPG11-214ENST00000558989 ZNF876PQ49A33 203 aa6.68□□□□□ -1.34
SPG11-214ENST00000558989 FMC1Q96HJ9 113 aa6.68□□□□□ -1.34
SPG11-214ENST00000558989 LOC100131303A0A0U1RQF7 123 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 FABP5P3A8MUU1 101 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 B4DEV8 164 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 SH2D1AO60880 128 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 CRIP1P50238 77 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 CRYBA4P53673 196 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 LCE2AQ5TA79 106 aaPredicted RBP6.67□□□□□ -1.34
SPG11-214ENST00000558989 DPPA3Q6W0C5 159 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 ZNRF2Q8NHG8 242 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 RASL10AQ92737 203 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 C18orf15Q96N68 181 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 PRO0255Q9UI72 69 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 ICOSQ9Y6W8 199 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 DNAH2Q9P225 4427 aa6.67□□□□□ -1.34
SPG11-214ENST00000558989 H3BVH4 76 aa6.66□□□□□ -1.34
SPG11-214ENST00000558989 CDK2AP2O75956 126 aa6.66□□□□□ -1.34
SPG11-214ENST00000558989 RNASE3P12724 160 aaKnown RBP6.66□□□□□ -1.34
SPG11-214ENST00000558989 CD164Q04900 197 aa6.66□□□□□ -1.34
SPG11-214ENST00000558989 C9orf62Q8N4C0 152 aa6.66□□□□□ -1.34
SPG11-214ENST00000558989 TRAV4A0A0B4J268 109 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms