RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 NTN5Q8WTR8 489 aaPredicted RBP8.94□□□□□ -0.98
VPS18-203ENST00000558855 TMEM70Q9BUB7 260 aa8.94□□□□□ -0.98
VPS18-203ENST00000558855 LRP1Q07954 4544 aaKnown RBP8.93□□□□□ -0.98
VPS18-203ENST00000558855 LTAP01374 205 aa8.93□□□□□ -0.98
VPS18-203ENST00000558855 ZNF674Q2M3X9 581 aa8.93□□□□□ -0.98
VPS18-203ENST00000558855 PIK3CD-AS1Q5SR53 167 aa8.93□□□□□ -0.98
VPS18-203ENST00000558855 HIST1H2BAQ96A08 127 aa8.93□□□□□ -0.98
VPS18-203ENST00000558855 SFRP2Q96HF1 295 aa8.93□□□□□ -0.98
VPS18-203ENST00000558855 DMBT1Q9UGM3 2413 aaPredicted RBP8.93□□□□□ -0.98
VPS18-203ENST00000558855 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.92□□□□□ -0.98
VPS18-203ENST00000558855 A0A1B0GV50 99 aa8.92□□□□□ -0.98
VPS18-203ENST00000558855 M0R381 172 aa8.92□□□□□ -0.98
VPS18-203ENST00000558855 LINC01559Q495D7 138 aa8.92□□□□□ -0.98
VPS18-203ENST00000558855 Q6ZSA8 131 aa8.92□□□□□ -0.98
VPS18-203ENST00000558855 OR11H4Q8NGC9 324 aa8.92□□□□□ -0.98
VPS18-203ENST00000558855 BAALCQ8WXS3 180 aa8.92□□□□□ -0.98
VPS18-203ENST00000558855 FMC1Q96HJ9 113 aa8.92□□□□□ -0.98
VPS18-203ENST00000558855 TRBV6-1A0A0K0K1D8 114 aa8.91□□□□□ -0.98
VPS18-203ENST00000558855 SCO2A0A1W2PP80 73 aa8.91□□□□□ -0.98
VPS18-203ENST00000558855 PAGE4O60829 102 aa8.91□□□□□ -0.98
VPS18-203ENST00000558855 FAM162BQ5T6X4 162 aa8.91□□□□□ -0.98
VPS18-203ENST00000558855 NIT1Q86X76 327 aa8.91□□□□□ -0.98
VPS18-203ENST00000558855 ZFP30Q9Y2G7 519 aa8.91□□□□□ -0.98
VPS18-203ENST00000558855 MUC21A0A0G2JKD1 596 aa8.9□□□□□ -0.98
VPS18-203ENST00000558855 MUC21A0A140T8X8 626 aa8.9□□□□□ -0.98
VPS18-203ENST00000558855 CST9LP1Q5W188 147 aa8.9□□□□□ -0.98
VPS18-203ENST00000558855 OR10AG1Q8NH19 301 aa8.9□□□□□ -0.98
VPS18-203ENST00000558855 RHODO00212 210 aa8.89□□□□□ -0.99
VPS18-203ENST00000558855 AKR1C3P42330 323 aa8.89□□□□□ -0.99
VPS18-203ENST00000558855 UBE2D3P61077 147 aa8.89□□□□□ -0.99
VPS18-203ENST00000558855 UBE2G1P62253 170 aa8.89□□□□□ -0.99
VPS18-203ENST00000558855 UBE2D2P62837 147 aa8.89□□□□□ -0.99
VPS18-203ENST00000558855 KCNRGQ8N5I3 272 aa8.89□□□□□ -0.99
VPS18-203ENST00000558855 SYT8Q8NBV8 401 aa8.89□□□□□ -0.99
VPS18-203ENST00000558855 KLK12Q9UKR0 248 aa8.89□□□□□ -0.99
VPS18-203ENST00000558855 PHLDA3Q9Y5J5 127 aa8.89□□□□□ -0.99
VPS18-203ENST00000558855 TPT1P13693 172 aaKnown RBP8.88□□□□□ -0.99
VPS18-203ENST00000558855 FAM213BQ8TBF2 198 aa8.88□□□□□ -0.99
VPS18-203ENST00000558855 MLST8Q9BVC4 326 aa8.88□□□□□ -0.99
VPS18-203ENST00000558855 NKX6-2Q9C056 277 aaPredicted RBP8.88□□□□□ -0.99
VPS18-203ENST00000558855 TRAV8-3A0A0A6YYJ7 113 aa8.87□□□□□ -0.99
VPS18-203ENST00000558855 RGS21Q2M5E4 152 aa8.87□□□□□ -0.99
VPS18-203ENST00000558855 ZFP82Q8N141 532 aa8.87□□□□□ -0.99
VPS18-203ENST00000558855 NEXN-AS1Q8NBZ9 246 aa8.87□□□□□ -0.99
VPS18-203ENST00000558855 MBD3L1Q8WWY6 194 aa8.87□□□□□ -0.99
VPS18-203ENST00000558855 TM2D2Q9BX73 214 aa8.87□□□□□ -0.99
VPS18-203ENST00000558855 HMCN2Q8NDA2 5059 aa8.86□□□□□ -0.99
VPS18-203ENST00000558855 IGKV2D-24A0A075B6R9 120 aa8.86□□□□□ -0.99
VPS18-203ENST00000558855 A0A087WWC5 75 aa8.86□□□□□ -0.99
VPS18-203ENST00000558855 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
VPS18-203ENST00000558855 KRTAP10-4P60372 401 aaPredicted RBP8.86□□□□□ -0.99
VPS18-203ENST00000558855 CCL20P78556 96 aa8.86□□□□□ -0.99
VPS18-203ENST00000558855 PRR27Q6MZM9 219 aa8.86□□□□□ -0.99
VPS18-203ENST00000558855 SCXQ7RTU7 201 aa8.86□□□□□ -0.99
VPS18-203ENST00000558855 SFT2D1Q8WV19 159 aa8.86□□□□□ -0.99
VPS18-203ENST00000558855 UBE2WQ96B02 151 aa8.86□□□□□ -0.99
VPS18-203ENST00000558855 DERL1Q9BUN8 251 aa8.86□□□□□ -0.99
VPS18-203ENST00000558855 SNAI2O43623 268 aa8.85□□□□□ -0.99
VPS18-203ENST00000558855 C1QBP02746 253 aa8.85□□□□□ -0.99
VPS18-203ENST00000558855 ZNF345Q14585 488 aa8.85□□□□□ -0.99
VPS18-203ENST00000558855 MPV17L2Q567V2 206 aa8.85□□□□□ -0.99
VPS18-203ENST00000558855 ATRAIDQ6UW56 229 aa8.85□□□□□ -0.99
VPS18-203ENST00000558855 ENHOQ6UWT2 76 aa8.85□□□□□ -0.99
VPS18-203ENST00000558855 LINC00528Q8N1L1 170 aa8.85□□□□□ -0.99
VPS18-203ENST00000558855 STOML3Q8TAV4 291 aa8.85□□□□□ -0.99
VPS18-203ENST00000558855 BOLA1Q9Y3E2 137 aa8.85□□□□□ -0.99
VPS18-203ENST00000558855 KIF25-AS1Q9Y6Z4 181 aa8.85□□□□□ -0.99
VPS18-203ENST00000558855 TRBV7-3A0A075B6L6 115 aa8.84□□□□□ -0.99
VPS18-203ENST00000558855 SEC11BP0C7V7 166 aa8.84□□□□□ -0.99
VPS18-203ENST00000558855 SSTP61278 116 aa8.84□□□□□ -0.99
VPS18-203ENST00000558855 NTM-AS1Q6ZSK4 140 aa8.84□□□□□ -0.99
VPS18-203ENST00000558855 OR10G8Q8NGN5 311 aa8.84□□□□□ -0.99
VPS18-203ENST00000558855 TCEAL7Q9BRU2 100 aa8.84□□□□□ -0.99
VPS18-203ENST00000558855 TRBV10-1A0A0K0K1A3 114 aa8.83□□□□□ -1
VPS18-203ENST00000558855 BCL2L11O43521 198 aa8.83□□□□□ -1
VPS18-203ENST00000558855 RPL36AP83881 106 aaKnown RBP8.83□□□□□ -1
VPS18-203ENST00000558855 ZNF56Q15929 161 aa8.83□□□□□ -1
VPS18-203ENST00000558855 RPL36ALQ969Q0 106 aaKnown RBP8.83□□□□□ -1
VPS18-203ENST00000558855 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
VPS18-203ENST00000558855 ZNF471Q9BX82 626 aaPredicted RBP8.83□□□□□ -1
VPS18-203ENST00000558855 TRBV6-8A0A0A6YYG3 113 aa8.82□□□□□ -1
VPS18-203ENST00000558855 RBFOX3A6NFN3 312 aa8.82□□□□□ -1
VPS18-203ENST00000558855 IGLV2-8P01709 118 aa8.82□□□□□ -1
VPS18-203ENST00000558855 CXCL1P09341 107 aa8.82□□□□□ -1
VPS18-203ENST00000558855 GZMBP10144 247 aa8.82□□□□□ -1
VPS18-203ENST00000558855 RAB4BP61018 213 aa8.82□□□□□ -1
VPS18-203ENST00000558855 TOR2AQ5JU69 321 aa8.82□□□□□ -1
VPS18-203ENST00000558855 BAGE2Q86Y30 109 aa8.82□□□□□ -1
VPS18-203ENST00000558855 Q8N976 141 aa8.82□□□□□ -1
VPS18-203ENST00000558855 HMSDA8MTL9 139 aa8.81□□□□□ -1
VPS18-203ENST00000558855 RPL35P42766 123 aaKnown RBP8.81□□□□□ -1
VPS18-203ENST00000558855 KRTAP26-1Q6PEX3 210 aa8.81□□□□□ -1
VPS18-203ENST00000558855 C15orf54Q8N8G6 183 aa8.81□□□□□ -1
VPS18-203ENST00000558855 URGCP-MRPS24S4R325 110 aa8.81□□□□□ -1
VPS18-203ENST00000558855 A0A087WX48 190 aa8.8□□□□□ -1
VPS18-203ENST00000558855 H2AFB1P0C5Y9 115 aa8.8□□□□□ -1
VPS18-203ENST00000558855 OR5AL1P0C617 328 aa8.8□□□□□ -1
VPS18-203ENST00000558855 CLPSL2Q6UWE3 100 aa8.8□□□□□ -1
VPS18-203ENST00000558855 TMUB2Q71RG4 321 aa8.8□□□□□ -1
VPS18-203ENST00000558855 C11orf52Q96A22 123 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms