RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 PIK3CD-AS1Q5SR53 167 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 KRTAP26-1Q6PEX3 210 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 C15orf54Q8N8G6 183 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 OR2G3Q8NGZ4 309 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 DEDD2Q8WXF8 326 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 HYLS1Q96M11 299 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 NPCDR1Q9BY65 106 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 NMES1Q9C002 83 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 C11orf1Q9H5F2 150 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 JPT2Q9H910 190 aa4.21□□□□□ -1.74
LRRC28-207ENST00000558500 LSM5Q9Y4Y9 91 aaKnown RBP4.21□□□□□ -1.74
LRRC28-207ENST00000558500 TAAR5O14804 337 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 ANGP03950 147 aaKnown RBP4.2□□□□□ -1.74
LRRC28-207ENST00000558500 SMIM18P0DKX4 95 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 ZNF80P51504 273 aaPredicted RBP4.2□□□□□ -1.74
LRRC28-207ENST00000558500 UBE2L3P68036 154 aaKnown RBP4.2□□□□□ -1.74
LRRC28-207ENST00000558500 HBG1P69891 147 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 HBG2P69892 147 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 SRSF9Q13242 221 aaKnown RBP eCLIP4.2□□□□□ -1.74
LRRC28-207ENST00000558500 ATP6V1FQ16864 119 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 LGALSLQ3ZCW2 172 aaPredicted RBP4.2□□□□□ -1.74
LRRC28-207ENST00000558500 MPV17L2Q567V2 206 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 GOLT1AQ6ZVE7 132 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 TMEM75Q8N9X5 138 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 CMTM2Q8TAZ6 248 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 BCL7BQ9BQE9 202 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 MLST8Q9BVC4 326 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 KRTAP9-3Q9BYQ3 159 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 SLIRPQ9GZT3 109 aaKnown RBP4.2□□□□□ -1.74
LRRC28-207ENST00000558500 OTORQ9NRC9 128 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 FLVCR2Q9UPI3 526 aa4.2□□□□□ -1.74
LRRC28-207ENST00000558500 TRBV6-8A0A0A6YYG3 113 aa4.19□□□□□ -1.74
LRRC28-207ENST00000558500 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.19□□□□□ -1.74
LRRC28-207ENST00000558500 hDV102S1A0JD36 115 aa4.19□□□□□ -1.74
LRRC28-207ENST00000558500 IGSF23A1L1A6 192 aa4.19□□□□□ -1.74
LRRC28-207ENST00000558500 NDUFB6O95139 128 aa4.19□□□□□ -1.74
LRRC28-207ENST00000558500 SLPIP03973 132 aa4.19□□□□□ -1.74
LRRC28-207ENST00000558500 PYDC2Q56P42 97 aa4.19□□□□□ -1.74
LRRC28-207ENST00000558500 STX12Q86Y82 276 aa4.19□□□□□ -1.74
LRRC28-207ENST00000558500 TMEM252Q8N6L7 170 aa4.19□□□□□ -1.74
LRRC28-207ENST00000558500 LYRM2Q9NU23 88 aaPredicted RBP4.19□□□□□ -1.74
LRRC28-207ENST00000558500 PRR34Q9NV39 138 aa4.19□□□□□ -1.74
LRRC28-207ENST00000558500 VAX2Q9UIW0 290 aa4.19□□□□□ -1.74
LRRC28-207ENST00000558500 MUC21A0A0G2JKD1 596 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 RHODO00212 210 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 CCSO14618 274 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 GCGP01275 180 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 TCRBP04435 133 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 PVALBP20472 110 aaPredicted RBP4.18□□□□□ -1.74
LRRC28-207ENST00000558500 S100A10P60903 97 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 UBE2D3P61077 147 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 UBE2D2P62837 147 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 GNG5P63218 68 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 RPL36AP83881 106 aaKnown RBP4.18□□□□□ -1.74
LRRC28-207ENST00000558500 FAM74A1Q5RGS3 127 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 ARL6IP6Q8N6S5 226 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 THAP6Q8TBB0 222 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 MITD1Q8WV92 249 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 RPL36ALQ969Q0 106 aaKnown RBP4.18□□□□□ -1.74
LRRC28-207ENST00000558500 NDFIP1Q9BT67 221 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 OR5AC2Q9NZP5 309 aa4.18□□□□□ -1.74
LRRC28-207ENST00000558500 TRBV7-3A0A075B6L6 115 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 TRBV10-1A0A0K0K1A3 114 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 FAM25EA8MYX2 175 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 H7C1H1 209 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 S100A4P26447 101 aaKnown RBP4.17□□□□□ -1.74
LRRC28-207ENST00000558500 PKIAP61925 76 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 COX6A2Q02221 97 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 FOXI1Q12951 378 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 MAJINQ3KP22 176 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 KHDC3LQ587J8 217 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 LCE5AQ5TCM9 118 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 FAM74A4Q5TZK3 123 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 CLPSL2Q6UWE3 100 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 LINC00269Q8N2A0 174 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 STPG4Q8N801 248 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 OR10G8Q8NGN5 311 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 LYPD6BQ8NI32 183 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 SGK494Q96LW2 274 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 CHCHD5Q9BSY4 110 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 KCNIP2Q9NS61 270 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 MBD2Q9UBB5 411 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 V9GYH0 126 aa4.17□□□□□ -1.74
LRRC28-207ENST00000558500 IGLV10-54A0A075B6I4 117 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 IGKV3D-20A0A0C4DH25 116 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 IGKV2-24A0A0C4DH68 120 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 FAM231BA6NCW3 169 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 NAP1L6A6NFF2 107 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 PTTG1O95997 202 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 TAS2R45P59539 299 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 RBX1P62877 108 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 OR5C1Q8NGR4 320 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 SFRP2Q96HF1 295 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 MRPS26Q9BYN8 205 aaKnown RBP4.16□□□□□ -1.74
LRRC28-207ENST00000558500 WDR61Q9GZS3 305 aaKnown RBP4.16□□□□□ -1.74
LRRC28-207ENST00000558500 IL36BQ9NZH7 164 aa4.16□□□□□ -1.74
LRRC28-207ENST00000558500 SERTM2A0A1B0GWG4 89 aa4.15□□□□□ -1.75
LRRC28-207ENST00000558500 C17orf112F2Z3M2 114 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms