RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 LINC00315P59091 139 aa8.44□□□□□ -1.06
PCAT29-201ENST00000558411 FAM110DQ8TAY7 271 aaPredicted RBP8.44□□□□□ -1.06
PCAT29-201ENST00000558411 ITLN2Q8WWU7 325 aaPredicted RBP8.44□□□□□ -1.06
PCAT29-201ENST00000558411 IGHV3-35A0A0C4DH35 117 aa8.43□□□□□ -1.06
PCAT29-201ENST00000558411 ODF3BA8MYP8 253 aa8.43□□□□□ -1.06
PCAT29-201ENST00000558411 RPL39P62891 51 aaKnown RBP8.43□□□□□ -1.06
PCAT29-201ENST00000558411 C15orf32Q32M92 178 aa8.43□□□□□ -1.06
PCAT29-201ENST00000558411 C5orf47Q569G3 176 aa8.43□□□□□ -1.06
PCAT29-201ENST00000558411 PLA2G2CQ5R387 149 aa8.43□□□□□ -1.06
PCAT29-201ENST00000558411 C3orf22Q8N5N4 141 aa8.43□□□□□ -1.06
PCAT29-201ENST00000558411 CSDC2Q9Y534 153 aaKnown RBP8.43□□□□□ -1.06
PCAT29-201ENST00000558411 A0A0J9YXY3 114 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 TRBV6-5A0A0K0K1A5 114 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 TRBV27A0A0K0K1C4 114 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 LST1O00453 97 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 OVOL1O14753 267 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 UQCRQO14949 82 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 ID1P41134 155 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 APRG1Q8IVJ8 170 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 LRRC75A-AS1Q8N1F1 130 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 C16orf92Q96LL3 132 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 BEX4Q9NWD9 120 aaPredicted RBP8.42□□□□□ -1.06
PCAT29-201ENST00000558411 GVINP1Q7Z2Y8 2422 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 IGHV7-81A0A0B4J1V7 117 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 IGHV3-66A0A0C4DH42 116 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 OOSP1A8MZH6 123 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 NDUFA7O95182 113 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 CD3EP07766 207 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 RNASE3P12724 160 aaKnown RBP8.42□□□□□ -1.06
PCAT29-201ENST00000558411 ZNF22P17026 224 aaPredicted RBP8.42□□□□□ -1.06
PCAT29-201ENST00000558411 RHOHQ15669 191 aa8.42□□□□□ -1.06
PCAT29-201ENST00000558411 A0A0G2JNJ9 132 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 FAM236AA0A1B0GUQ0 79 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 FAM236BA0A1B0GV22 79 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 A0A1B0GX51 115 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 NSUN5P1Q3KNT7 163 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 C9orf153Q5TBE3 101 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 FAM19A4Q96LR4 140 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 Q9UFV3 132 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 TRGV11A0A075B6L2 103 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 CDX4O14627 284 aaPredicted RBP8.41□□□□□ -1.06
PCAT29-201ENST00000558411 UBE2E1P51965 193 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 SUMO4Q6EEV6 95 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 LINC00526Q96FQ7 95 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 DUX3Q96PT4 197 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 LITAFQ99732 161 aa8.41□□□□□ -1.06
PCAT29-201ENST00000558411 DSPP15924 2871 aaKnown RBP8.41□□□□□ -1.06
PCAT29-201ENST00000558411 CFAP47Q6ZTR5 3102 aa8.4□□□□□ -1.06
PCAT29-201ENST00000558411 M0R1W7 72 aa8.4□□□□□ -1.06
PCAT29-201ENST00000558411 SPRY2O43597 315 aa8.4□□□□□ -1.06
PCAT29-201ENST00000558411 IGF1P05019 195 aa8.4□□□□□ -1.06
PCAT29-201ENST00000558411 LINC00694P0DN24 101 aa8.4□□□□□ -1.06
PCAT29-201ENST00000558411 B9A039 149 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 E7EQL1 145 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 LINC00643Q86TS7 51 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 EEF1AKMT3Q96AZ1 226 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 C20orf173Q96LM9 149 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 CCDC140Q96MF4 163 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 CEP250Q9BV73 2442 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 TRBV7-1A0A0A6YYK4 115 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 J3KT08 172 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 IGFL3Q6UXB1 125 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 ZFHX4Q86UP3 3567 aa8.39□□□□□ -1.07
PCAT29-201ENST00000558411 CNOT1A5YKK6 2376 aaKnown RBP8.38□□□□□ -1.07
PCAT29-201ENST00000558411 IGHV3OR16-13A0A075B7E8 117 aa8.38□□□□□ -1.07
PCAT29-201ENST00000558411 IGHV3-74A0A0B4J1X5 117 aa8.38□□□□□ -1.07
PCAT29-201ENST00000558411 NPFFO15130 113 aa8.38□□□□□ -1.07
PCAT29-201ENST00000558411 CLEC19AQ6UXS0 136 aa8.38□□□□□ -1.07
PCAT29-201ENST00000558411 ZNF256Q9Y2P7 627 aaPredicted RBP8.38□□□□□ -1.07
PCAT29-201ENST00000558411 J3KRW8 73 aa8.38□□□□□ -1.07
PCAT29-201ENST00000558411 GNRH2O43555 120 aa8.38□□□□□ -1.07
PCAT29-201ENST00000558411 RNASE4P34096 147 aaKnown RBP8.38□□□□□ -1.07
PCAT29-201ENST00000558411 CXCL5P42830 114 aa8.38□□□□□ -1.07
PCAT29-201ENST00000558411 RPS28P62857 69 aaKnown RBP8.38□□□□□ -1.07
PCAT29-201ENST00000558411 MIAQ16674 131 aa8.38□□□□□ -1.07
PCAT29-201ENST00000558411 C3orf56Q8N813 242 aa8.38□□□□□ -1.07
PCAT29-201ENST00000558411 PTPRZ1P23471 2315 aaPredicted RBP8.37□□□□□ -1.07
PCAT29-201ENST00000558411 LAMA5O15230 3695 aa8.37□□□□□ -1.07
PCAT29-201ENST00000558411 HERVK_113P63121 156 aa8.37□□□□□ -1.07
PCAT29-201ENST00000558411 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
PCAT29-201ENST00000558411 Q8N9W7 124 aa8.37□□□□□ -1.07
PCAT29-201ENST00000558411 IGHV3-49A0A0A0MS15 119 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 IGHV3-30-3P0DP02 117 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 MINOS1Q5TGZ0 78 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 MINOS1-NBL1R4GNA1 71 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 ARHGAP32A7KAX9 2087 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 AKAP13Q12802 2813 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 I3L3M4 83 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 SOCS3O14543 225 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 DEFB109BQ30KR1 87 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 TMEM61Q8N0U2 210 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 CLEC2BQ92478 149 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 SPXQ9BT56 116 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 TIMM21Q9BVV7 248 aa8.36□□□□□ -1.07
PCAT29-201ENST00000558411 LOC400499M0QZD8 3231 aa8.35□□□□□ -1.07
PCAT29-201ENST00000558411 IGHV3-64A0A075B6Q5 118 aa8.35□□□□□ -1.07
PCAT29-201ENST00000558411 SMIM9A6NGZ8 99 aa8.35□□□□□ -1.07
PCAT29-201ENST00000558411 LYNX1G3V0Z9 82 aa8.35□□□□□ -1.07
PCAT29-201ENST00000558411 LYNX1P0DP58 116 aa8.35□□□□□ -1.07
PCAT29-201ENST00000558411 NBL1P41271 181 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms