RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 MUC21A0A140T8X8 626 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 SMIM27A0A1W2PRY6 76 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 HIGD1CA8MV81 97 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 CRYGDP07320 174 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 SMIM17P0DL12 118 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 CRYBA4P53673 196 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 SSTP61278 116 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 TWIST1Q15672 202 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 TMEM88Q6PEY1 159 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 PGLYRP4Q96LB8 373 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 AP1S3Q96PC3 154 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 CTDSP1Q9GZU7 261 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 JPT2Q9H910 190 aa7.35□□□□□ -1.23
LRRC28-204ENST00000558172 TRAV26-1A0A087WT03 109 aa7.34□□□□□ -1.23
LRRC28-204ENST00000558172 A0A1B0GUT8 65 aa7.34□□□□□ -1.23
LRRC28-204ENST00000558172 TRBV6-4A0A1B0GX49 114 aa7.34□□□□□ -1.23
LRRC28-204ENST00000558172 PAX4O43316 350 aa7.34□□□□□ -1.23
LRRC28-204ENST00000558172 GATA1P15976 413 aaPredicted RBP7.34□□□□□ -1.23
LRRC28-204ENST00000558172 UFSP1Q6NVU6 142 aa7.34□□□□□ -1.23
LRRC28-204ENST00000558172 SMIM15Q7Z3B0 74 aa7.34□□□□□ -1.23
LRRC28-204ENST00000558172 NUP35Q8NFH5 326 aa7.34□□□□□ -1.23
LRRC28-204ENST00000558172 SAMD10Q9BYL1 202 aa7.34□□□□□ -1.23
LRRC28-204ENST00000558172 APLNQ9ULZ1 77 aa7.34□□□□□ -1.23
LRRC28-204ENST00000558172 A0A087WWL8 130 aa7.33□□□□□ -1.24
LRRC28-204ENST00000558172 IGHV3-73A0A0B4J1V6 119 aa7.33□□□□□ -1.24
LRRC28-204ENST00000558172 A0A0J9YY99 117 aa7.33□□□□□ -1.24
LRRC28-204ENST00000558172 RIGQ13278 110 aa7.33□□□□□ -1.24
LRRC28-204ENST00000558172 RHOHQ15669 191 aa7.33□□□□□ -1.24
LRRC28-204ENST00000558172 FAM74A4Q5TZK3 123 aa7.33□□□□□ -1.24
LRRC28-204ENST00000558172 C14orf178Q8N769 122 aaPredicted RBP7.33□□□□□ -1.24
LRRC28-204ENST00000558172 VSIG2Q96IQ7 327 aa7.33□□□□□ -1.24
LRRC28-204ENST00000558172 PRADC1Q9BSG0 188 aa7.33□□□□□ -1.24
LRRC28-204ENST00000558172 TMEM242Q9NWH2 141 aa7.33□□□□□ -1.24
LRRC28-204ENST00000558172 MSRB1Q9NZV6 116 aa7.33□□□□□ -1.24
LRRC28-204ENST00000558172 A0A087WWC5 75 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 A0A1B0GW15 77 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 APOC3P02656 99 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 RAB4BP61018 213 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 RHEBQ15382 184 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 SLC7A5P1Q8MH63 180 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 SVBPQ8N300 66 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 SLC25A29Q8N8R3 303 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 CLRN3Q8NCR9 226 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 IMMP2LQ96T52 175 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 DPH3P1Q9H4G8 78 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 ICOSQ9Y6W8 199 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 KIF25-AS1Q9Y6Z4 181 aa7.32□□□□□ -1.24
LRRC28-204ENST00000558172 C7orf77A4D0Y5 90 aa7.31□□□□□ -1.24
LRRC28-204ENST00000558172 SNAPINO95295 136 aa7.31□□□□□ -1.24
LRRC28-204ENST00000558172 NUDT3O95989 172 aa7.31□□□□□ -1.24
LRRC28-204ENST00000558172 S100A8P05109 93 aa7.31□□□□□ -1.24
LRRC28-204ENST00000558172 EVI2AP22794 236 aa7.31□□□□□ -1.24
LRRC28-204ENST00000558172 ZNF56Q15929 161 aa7.31□□□□□ -1.24
LRRC28-204ENST00000558172 MRPL23Q16540 153 aaKnown RBP7.31□□□□□ -1.24
LRRC28-204ENST00000558172 TRBV10-1A0A0K0K1A3 114 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 F5H697 171 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 K7EQD1 137 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 GYPEP15421 78 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 LINC00315P59091 139 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 KCNIP4Q6PIL6 250 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 Q6ZSN1 163 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 SH2D6Q7Z4S9 175 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 ATP5L2Q7Z4Y8 100 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 FRZBQ92765 325 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 TMEM191AQ9H0A3 160 aa7.3□□□□□ -1.24
LRRC28-204ENST00000558172 TRAV9-1A0A075B6T8 112 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 A0A096LPF7 62 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 H7C1H1 209 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 MGPP08493 103 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 P0DMU3 169 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 FAM231AP0DMU4 169 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 FAM231CP0DMU5 169 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 S100PP25815 95 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 SRIP30626 198 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 FAM3BP58499 235 aaPredicted RBP7.29□□□□□ -1.24
LRRC28-204ENST00000558172 BTF3L4Q96K17 158 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 RPS10P5Q9NQ39 176 aa7.29□□□□□ -1.24
LRRC28-204ENST00000558172 CCL18P55774 89 aa7.28□□□□□ -1.24
LRRC28-204ENST00000558172 HBBP68871 147 aa7.28□□□□□ -1.24
LRRC28-204ENST00000558172 LGALS9CQ6DKI2 356 aa7.28□□□□□ -1.24
LRRC28-204ENST00000558172 NEGR1Q7Z3B1 354 aa7.28□□□□□ -1.24
LRRC28-204ENST00000558172 DNAJC30Q96LL9 226 aa7.28□□□□□ -1.24
LRRC28-204ENST00000558172 ALMS1Q8TCU4 4167 aa7.27□□□□□ -1.25
LRRC28-204ENST00000558172 VPS13DQ5THJ4 4388 aa7.27□□□□□ -1.25
LRRC28-204ENST00000558172 A0A1B0GXF2 115 aa7.27□□□□□ -1.25
LRRC28-204ENST00000558172 CAMPP49913 170 aa7.27□□□□□ -1.25
LRRC28-204ENST00000558172 RPL36AP83881 106 aaKnown RBP7.27□□□□□ -1.25
LRRC28-204ENST00000558172 SUMO4Q6EEV6 95 aa7.27□□□□□ -1.25
LRRC28-204ENST00000558172 MRPL54Q6P161 138 aaKnown RBP7.27□□□□□ -1.25
LRRC28-204ENST00000558172 RPL36ALQ969Q0 106 aaKnown RBP7.27□□□□□ -1.25
LRRC28-204ENST00000558172 DNAH1Q9P2D7 4330 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 TRBV7-3A0A075B6L6 115 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 LOC100131303A0A0U1RQF7 123 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 GAGE12JA6NER3 117 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 M0QY20 66 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 RAB4AP20338 218 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 GAGE1Q13065 139 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 GAGE4Q13068 117 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 GAGE5Q13069 117 aa7.26□□□□□ -1.25
LRRC28-204ENST00000558172 GAGE13Q4V321 117 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms