RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 TCL1AP56279 114 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 ERCC8Q13216 396 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 SMUG1Q53HV7 270 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 TMEM78Q5T7P6 136 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 GFI1BQ5VTD9 330 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 WDR73Q6P4I2 378 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 RASL11AQ6T310 242 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 ATP5L2Q7Z4Y8 100 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 C16orf74Q96GX8 76 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 ZC2HC1AQ96GY0 325 aa5.3□□□□□ -1.56
SPG11-205ENST00000558080 TIMM8BQ9Y5J9 83 aaPredicted RBP5.3□□□□□ -1.56
SPG11-205ENST00000558080 DNAH17Q9UFH2 4485 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 TRAV12-3A0A0B4J271 114 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 XKRY2A2RUG3 117 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 CBY3A6NI87 242 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 PRSS29PA6NIE9 313 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 PHOX2AO14813 284 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 RTL8CO15255 209 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST1H2BKO60814 126 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 NUDT3O95989 172 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 ATP5G1P05496 136 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST1H2BJP06899 126 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 TRGC1P0CF51 173 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST1H2BOP23527 126 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST1H2BBP33778 126 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 LEPP41159 167 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 ZNF138P52744 262 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST1H2BDP58876 126 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 RPS20P60866 119 aaKnown RBP5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST1H2BCP62807 126 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST2H2BEQ16778 126 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 LGALS9BQ3B8N2 356 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.29□□□□□ -1.56
SPG11-205ENST00000558080 FAM162BQ5T6X4 162 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 Q6AWC8 147 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 ZNF493Q6ZR52 646 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 C9orf47Q6ZRZ4 202 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 LINC00336Q6ZUF6 198 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 C15orf53Q8NAA6 179 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 OR2D3Q8NGH3 330 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 RNASE8Q8TDE3 154 aaKnown RBP5.29□□□□□ -1.56
SPG11-205ENST00000558080 TMEM263Q8WUH6 116 aaKnown RBP5.29□□□□□ -1.56
SPG11-205ENST00000558080 FRZBQ92765 325 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST1H2BHQ93079 126 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST1H2BNQ99877 126 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 HIST1H2BMQ99879 126 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 VGLL1Q99990 258 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 GNB1LQ9BYB4 327 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 LENEPQ9Y5L5 61 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 TRAPPC1Q9Y5R8 145 aa5.29□□□□□ -1.56
SPG11-205ENST00000558080 GAGE12BA1L429 117 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 C5orf52A6NGY3 159 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 HIGD1CA8MV81 97 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 SNURFLB1AK76 121 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 SH2D1AO60880 128 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 GAGE7O76087 117 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 HLA-DQA1P01909 254 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 GAGE12FP0CL80 117 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 GAGE12GP0CL81 117 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 GAGE12IP0CL82 117 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 SNRPEP62304 92 aaKnown RBP5.28□□□□□ -1.56
SPG11-205ENST00000558080 FABP9Q0Z7S8 132 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 Q6ZR54 194 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 NUP35Q8NFH5 326 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 Q8TAT8 98 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 LINC00477Q96M19 166 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 C20orf144Q9BQM9 153 aa5.28□□□□□ -1.56
SPG11-205ENST00000558080 TRBV7-9A0A0J9YWB2 115 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 A0A1B0GVY2 172 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 C7orf71A4D174 169 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 FABP5P3A8MUU1 101 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 S100A8P05109 93 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 RNASE4P34096 147 aaKnown RBP5.27□□□□□ -1.57
SPG11-205ENST00000558080 CRIP1P50238 77 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 FOXA3P55318 350 aaPredicted RBP5.27□□□□□ -1.57
SPG11-205ENST00000558080 NDUFA6P56556 154 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 HBBP68871 147 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 MRPL54Q6P161 138 aaKnown RBP5.27□□□□□ -1.57
SPG11-205ENST00000558080 TMEM136Q6ZRR5 245 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 BORCS7Q96B45 105 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 ODF3Q96PU9 254 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 AGPAT4-IT1Q9H0P7 198 aa5.27□□□□□ -1.57
SPG11-205ENST00000558080 HECTD4Q9Y4D8 3996 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 KIAA1109Q2LD37 5005 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 A0A0J9YY99 117 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 A0A1B0GW15 77 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 A0A1B0GXF2 115 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 SPINK4O60575 86 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 GPX1P07203 203 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 RAB4BP61018 213 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 RIGQ13278 110 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 C1orf134Q5TEV5 83 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 Q6ZTI0 123 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 GTSF1Q8WW33 167 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 PGLYRP4Q96LB8 373 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 GSN-AS1Q9NRJ2 163 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 TNFRSF18Q9Y5U5 241 aa5.26□□□□□ -1.57
SPG11-205ENST00000558080 DNAH2Q9P225 4427 aa5.25□□□□□ -1.57
SPG11-205ENST00000558080 TRAV26-1A0A087WT03 109 aa5.25□□□□□ -1.57
SPG11-205ENST00000558080 A0A1B0GUT8 65 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms