RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 AP1S3Q96PC3 154 aa9.54□□□□□ -0.88
SHMT2-234ENST00000557703 PLECQ15149 4684 aaKnown RBP9.53□□□□□ -0.88
SHMT2-234ENST00000557703 A0A096LPF7 62 aa9.53□□□□□ -0.88
SHMT2-234ENST00000557703 A0A0J9YY99 117 aa9.53□□□□□ -0.88
SHMT2-234ENST00000557703 TRBV10-1A0A0K0K1A3 114 aa9.53□□□□□ -0.88
SHMT2-234ENST00000557703 CRYGDP07320 174 aa9.53□□□□□ -0.88
SHMT2-234ENST00000557703 SMIM17P0DL12 118 aa9.53□□□□□ -0.88
SHMT2-234ENST00000557703 TIRAPP58753 221 aa9.53□□□□□ -0.88
SHMT2-234ENST00000557703 OR10AG1Q8NH19 301 aa9.53□□□□□ -0.88
SHMT2-234ENST00000557703 SRIP30626 198 aa9.52□□□□□ -0.89
SHMT2-234ENST00000557703 RAB4BP61018 213 aa9.52□□□□□ -0.89
SHMT2-234ENST00000557703 LYZL1Q6UWQ5 148 aa9.52□□□□□ -0.89
SHMT2-234ENST00000557703 UBE2DNLQ8IWF7 75 aa9.52□□□□□ -0.89
SHMT2-234ENST00000557703 SLC25A29Q8N8R3 303 aa9.52□□□□□ -0.89
SHMT2-234ENST00000557703 BORCS7Q96B45 105 aa9.52□□□□□ -0.89
SHMT2-234ENST00000557703 LINC00862A6NCI5 91 aa9.51□□□□□ -0.89
SHMT2-234ENST00000557703 K7EQD1 137 aa9.51□□□□□ -0.89
SHMT2-234ENST00000557703 PPP1R2P9O14990 202 aa9.51□□□□□ -0.89
SHMT2-234ENST00000557703 GYPEP15421 78 aa9.51□□□□□ -0.89
SHMT2-234ENST00000557703 ADIRFQ15847 76 aa9.51□□□□□ -0.89
SHMT2-234ENST00000557703 SMIM15Q7Z3B0 74 aa9.51□□□□□ -0.89
SHMT2-234ENST00000557703 OR10G8Q8NGN5 311 aa9.51□□□□□ -0.89
SHMT2-234ENST00000557703 FRZBQ92765 325 aa9.51□□□□□ -0.89
SHMT2-234ENST00000557703 UPK3BQ9BT76 320 aa9.51□□□□□ -0.89
SHMT2-234ENST00000557703 TPPP3Q9BW30 176 aa9.51□□□□□ -0.89
SHMT2-234ENST00000557703 H7C1H1 209 aa9.5□□□□□ -0.89
SHMT2-234ENST00000557703 K7EP13 123 aa9.5□□□□□ -0.89
SHMT2-234ENST00000557703 GZMBP10144 247 aa9.5□□□□□ -0.89
SHMT2-234ENST00000557703 NTF3P20783 257 aa9.5□□□□□ -0.89
SHMT2-234ENST00000557703 V9GYV3 84 aa9.5□□□□□ -0.89
SHMT2-234ENST00000557703 KMT2CQ8NEZ4 4911 aaKnown RBP9.5□□□□□ -0.89
SHMT2-234ENST00000557703 FAM74A4Q5TZK3 123 aa9.49□□□□□ -0.89
SHMT2-234ENST00000557703 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.49□□□□□ -0.89
SHMT2-234ENST00000557703 SAMD10Q9BYL1 202 aa9.49□□□□□ -0.89
SHMT2-234ENST00000557703 JPT2Q9H910 190 aa9.49□□□□□ -0.89
SHMT2-234ENST00000557703 NAT8BQ9UHF3 227 aa9.49□□□□□ -0.89
SHMT2-234ENST00000557703 A0A1B0GUT8 65 aa9.48□□□□□ -0.89
SHMT2-234ENST00000557703 A0A1B0GW15 77 aa9.48□□□□□ -0.89
SHMT2-234ENST00000557703 TMEM218A2RU14 115 aa9.48□□□□□ -0.89
SHMT2-234ENST00000557703 HIGD1CA8MV81 97 aa9.48□□□□□ -0.89
SHMT2-234ENST00000557703 MT-ND4LP03901 98 aa9.48□□□□□ -0.89
SHMT2-234ENST00000557703 BTF3P20290 206 aaKnown RBP9.48□□□□□ -0.89
SHMT2-234ENST00000557703 GTSF1Q8WW33 167 aa9.48□□□□□ -0.89
SHMT2-234ENST00000557703 ANAPC16Q96DE5 110 aa9.48□□□□□ -0.89
SHMT2-234ENST00000557703 SEC11CQ9BY50 192 aa9.48□□□□□ -0.89
SHMT2-234ENST00000557703 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
SHMT2-234ENST00000557703 MRPS16Q9Y3D3 137 aaKnown RBP9.48□□□□□ -0.89
SHMT2-234ENST00000557703 KIF25-AS1Q9Y6Z4 181 aa9.48□□□□□ -0.89
SHMT2-234ENST00000557703 A0A087WWC5 75 aa9.47□□□□□ -0.89
SHMT2-234ENST00000557703 A0A087WWL8 130 aa9.47□□□□□ -0.89
SHMT2-234ENST00000557703 RPL36AP83881 106 aaKnown RBP9.47□□□□□ -0.89
SHMT2-234ENST00000557703 TWIST1Q15672 202 aa9.47□□□□□ -0.89
SHMT2-234ENST00000557703 ESRGQ1W209 222 aa9.47□□□□□ -0.89
SHMT2-234ENST00000557703 C14orf178Q8N769 122 aaPredicted RBP9.47□□□□□ -0.89
SHMT2-234ENST00000557703 RPL36ALQ969Q0 106 aaKnown RBP9.47□□□□□ -0.89
SHMT2-234ENST00000557703 LINC00588Q9Y4M8 146 aa9.47□□□□□ -0.89
SHMT2-234ENST00000557703 ALMS1Q8TCU4 4167 aa9.46□□□□□ -0.89
SHMT2-234ENST00000557703 TRBV7-3A0A075B6L6 115 aa9.46□□□□□ -0.9
SHMT2-234ENST00000557703 IGHV3-73A0A0B4J1V6 119 aa9.46□□□□□ -0.9
SHMT2-234ENST00000557703 SMIM27A0A1W2PRY6 76 aa9.46□□□□□ -0.9
SHMT2-234ENST00000557703 ZNF56Q15929 161 aa9.46□□□□□ -0.9
SHMT2-234ENST00000557703 LYPD5Q6UWN5 251 aa9.46□□□□□ -0.9
SHMT2-234ENST00000557703 COMMD7Q86VX2 200 aa9.46□□□□□ -0.9
SHMT2-234ENST00000557703 ATP6V0E2Q8NHE4 81 aa9.46□□□□□ -0.9
SHMT2-234ENST00000557703 DNAJC30Q96LL9 226 aa9.46□□□□□ -0.9
SHMT2-234ENST00000557703 F5H697 171 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 F8W036 122 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 S100A8P05109 93 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 LINC00315P59091 139 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 RIGQ13278 110 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 TMEM97Q5BJF2 176 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 TTC32Q5I0X7 151 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 Q6ZSN1 163 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 ZNRF2Q8NHG8 242 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 PGLYRP4Q96LB8 373 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 GTSF1LQ9H1H1 148 aa9.45□□□□□ -0.9
SHMT2-234ENST00000557703 DNAH1Q9P2D7 4330 aa9.44□□□□□ -0.9
SHMT2-234ENST00000557703 MUC21A0A0G2JKD1 596 aa9.44□□□□□ -0.9
SHMT2-234ENST00000557703 MUC21A0A140T8X8 626 aa9.44□□□□□ -0.9
SHMT2-234ENST00000557703 LINC00694P0DN24 101 aa9.44□□□□□ -0.9
SHMT2-234ENST00000557703 EVI2AP22794 236 aa9.44□□□□□ -0.9
SHMT2-234ENST00000557703 TMEM191AQ9H0A3 160 aa9.44□□□□□ -0.9
SHMT2-234ENST00000557703 Q9H8V8 135 aa9.44□□□□□ -0.9
SHMT2-234ENST00000557703 MSRB1Q9NZV6 116 aa9.44□□□□□ -0.9
SHMT2-234ENST00000557703 LELP1Q5T871 98 aa9.43□□□□□ -0.9
SHMT2-234ENST00000557703 DAZ4Q86SG3 579 aaKnown RBP9.43□□□□□ -0.9
SHMT2-234ENST00000557703 NUP35Q8NFH5 326 aa9.43□□□□□ -0.9
SHMT2-234ENST00000557703 IMMP2LQ96T52 175 aa9.43□□□□□ -0.9
SHMT2-234ENST00000557703 CTDSP1Q9GZU7 261 aa9.43□□□□□ -0.9
SHMT2-234ENST00000557703 DAZ3Q9NR90 486 aaKnown RBP9.43□□□□□ -0.9
SHMT2-234ENST00000557703 KMT2AQ03164 3969 aa9.42□□□□□ -0.9
SHMT2-234ENST00000557703 TRAV9-2A0A087WT02 112 aa9.42□□□□□ -0.9
SHMT2-234ENST00000557703 TRAV8-6A0A0B4J262 113 aa9.42□□□□□ -0.9
SHMT2-234ENST00000557703 M0QY20 66 aa9.42□□□□□ -0.9
SHMT2-234ENST00000557703 SIVA1O15304 175 aa9.42□□□□□ -0.9
SHMT2-234ENST00000557703 SSTP61278 116 aa9.42□□□□□ -0.9
SHMT2-234ENST00000557703 C10orf91Q5T1B1 145 aa9.42□□□□□ -0.9
SHMT2-234ENST00000557703 ATP5L2Q7Z4Y8 100 aa9.42□□□□□ -0.9
SHMT2-234ENST00000557703 TMEM242Q9NWH2 141 aa9.42□□□□□ -0.9
SHMT2-234ENST00000557703 SACSQ9NZJ4 4579 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms