RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 Q6ZS46 218 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 C10orf126Q8N4M7 172 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 RHPN1-AS1Q9BWJ2 59 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 SDHAF1A6NFY7 115 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 A8MWV9 139 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 KLLNB2CW77 178 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 H3BUA1 57 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 IGHV3-11P01762 117 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 SPINK8P0C7L1 97 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 ZNF876PQ49A33 203 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 PTH2Q96A98 100 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 JPT2Q9H910 190 aa8.86□□□□□ -0.99
VIPAS39-211ENST00000557658 IGHV3OR16-10A0A075B7F0 116 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 LGALS3P17931 250 aaKnown RBP8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 DEFB104AQ8WTQ1 72 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 PRO1854Q9UHT4 67 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 A0A087WWL8 130 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 TRBV27A0A0K0K1C4 114 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 J3QQQ9 107 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 BRI3O95415 125 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 SCGB1C2P0DMR2 95 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 NBL1P41271 181 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 SBSPONQ8IVN8 264 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 ZNRF2Q8NHG8 242 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 CARD19Q96LW7 228 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 CEP295Q9C0D2 2601 aa8.85□□□□□ -0.99
VIPAS39-211ENST00000557658 TRBV6-5A0A0K0K1A5 114 aa8.84□□□□□ -0.99
VIPAS39-211ENST00000557658 LGALS9O00182 355 aa8.84□□□□□ -0.99
VIPAS39-211ENST00000557658 IGHV1-69P01742 117 aa8.84□□□□□ -0.99
VIPAS39-211ENST00000557658 PF4V1P10720 104 aa8.84□□□□□ -0.99
VIPAS39-211ENST00000557658 ID1P41134 155 aa8.84□□□□□ -0.99
VIPAS39-211ENST00000557658 Q6ZUT4 128 aa8.84□□□□□ -0.99
VIPAS39-211ENST00000557658 MT-ATP8P03928 68 aa8.83□□□□□ -1
VIPAS39-211ENST00000557658 FHL3Q13643 280 aa8.83□□□□□ -1
VIPAS39-211ENST00000557658 AMELXQ99217 191 aa8.83□□□□□ -1
VIPAS39-211ENST00000557658 GEMIN7Q9H840 131 aaKnown RBP8.83□□□□□ -1
VIPAS39-211ENST00000557658 DAZ1Q9NQZ3 744 aaKnown RBP8.83□□□□□ -1
VIPAS39-211ENST00000557658 IGHG2P01859 326 aa8.82□□□□□ -1
VIPAS39-211ENST00000557658 SRD5A1P18405 259 aa8.82□□□□□ -1
VIPAS39-211ENST00000557658 XGP55808 180 aa8.82□□□□□ -1
VIPAS39-211ENST00000557658 BRD3OSQ6XYD6 125 aa8.82□□□□□ -1
VIPAS39-211ENST00000557658 ZNF256Q9Y2P7 627 aaPredicted RBP8.82□□□□□ -1
VIPAS39-211ENST00000557658 TRAV12-3A0A0B4J271 114 aa8.82□□□□□ -1
VIPAS39-211ENST00000557658 LEPROTO15243 131 aa8.82□□□□□ -1
VIPAS39-211ENST00000557658 ZNF688P0C7X2 276 aa8.82□□□□□ -1
VIPAS39-211ENST00000557658 RHOHQ15669 191 aa8.82□□□□□ -1
VIPAS39-211ENST00000557658 FAM74A4Q5TZK3 123 aa8.82□□□□□ -1
VIPAS39-211ENST00000557658 TGFAP01135 160 aa8.81□□□□□ -1
VIPAS39-211ENST00000557658 LY6EQ16553 131 aa8.81□□□□□ -1
VIPAS39-211ENST00000557658 ANKRD29Q8N6D5 301 aa8.81□□□□□ -1
VIPAS39-211ENST00000557658 ZNF56Q15929 161 aa8.81□□□□□ -1
VIPAS39-211ENST00000557658 NSUN5P1Q3KNT7 163 aa8.81□□□□□ -1
VIPAS39-211ENST00000557658 TMEM223A0PJW6 202 aa8.8□□□□□ -1
VIPAS39-211ENST00000557658 A4D1N5 150 aa8.8□□□□□ -1
VIPAS39-211ENST00000557658 WFDC12Q8WWY7 111 aa8.8□□□□□ -1
VIPAS39-211ENST00000557658 RELNP78509 3460 aa8.8□□□□□ -1
VIPAS39-211ENST00000557658 TMEM262E9PQX1 116 aa8.8□□□□□ -1
VIPAS39-211ENST00000557658 C9orf85Q96MD7 179 aa8.8□□□□□ -1
VIPAS39-211ENST00000557658 SVEP1Q4LDE5 3571 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 TRAV26-1A0A087WT03 109 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 IGHV3-16A0A0C4DH30 117 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 K7EMT4 169 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 M0QXV9 152 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 M0QY20 66 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 SLC25A20O43772 301 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 IGHV3-33P01772 117 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 TRPT1Q86TN4 253 aaKnown RBP8.79□□□□□ -1
VIPAS39-211ENST00000557658 RAX2Q96IS3 184 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 ERG28Q9UKR5 140 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 AKAP6Q13023 2319 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 A0A0B4J2C4 111 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 UCNP55089 124 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 DCANP1Q8TF63 244 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 TMEM263Q8WUH6 116 aaKnown RBP8.79□□□□□ -1
VIPAS39-211ENST00000557658 ASH1LQ9NR48 2969 aaKnown RBP8.79□□□□□ -1
VIPAS39-211ENST00000557658 MUC6Q6W4X9 2439 aa8.79□□□□□ -1
VIPAS39-211ENST00000557658 TRAV2A0A0B4J234 112 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 A6NDX4 124 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 H3BUX3 64 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 ODF3Q96PU9 254 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 OPRPNQ99935 248 aaPredicted RBP8.78□□□□□ -1
VIPAS39-211ENST00000557658 COL6A6A6NMZ7 2263 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 C9JAW5 83 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 RHODO00212 210 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 IGLV1-40P01703 118 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 ZNF22P17026 224 aaPredicted RBP8.78□□□□□ -1
VIPAS39-211ENST00000557658 C20orf203Q8NBC4 194 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 MDFICQ9P1T7 246 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 ABCA2Q9BZC7 2435 aa8.78□□□□□ -1
VIPAS39-211ENST00000557658 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.77□□□□□ -1
VIPAS39-211ENST00000557658 P0DMU3 169 aa8.77□□□□□ -1
VIPAS39-211ENST00000557658 FAM231AP0DMU4 169 aa8.77□□□□□ -1
VIPAS39-211ENST00000557658 FAM231CP0DMU5 169 aa8.77□□□□□ -1
VIPAS39-211ENST00000557658 BLCAPP62952 87 aa8.77□□□□□ -1
VIPAS39-211ENST00000557658 MUSTN1Q8IVN3 82 aa8.77□□□□□ -1
VIPAS39-211ENST00000557658 CLUHP3Q96NS8 147 aa8.77□□□□□ -1
VIPAS39-211ENST00000557658 EDN2P20800 178 aa8.77□□□□□ -1.01
VIPAS39-211ENST00000557658 IGHV3-64A0A075B6Q5 118 aa8.76□□□□□ -1.01
VIPAS39-211ENST00000557658 A0A0J9YX75 114 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms