RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 PLAC8L1A1L4L8 177 aa8.8□□□□□ -1
TMEM260-215ENST00000557626 LRCOL1A6NCL2 159 aa8.8□□□□□ -1
TMEM260-215ENST00000557626 ZNF705GA8MUZ8 300 aaPredicted RBP8.8□□□□□ -1
TMEM260-215ENST00000557626 PSCAO43653 123 aa8.8□□□□□ -1
TMEM260-215ENST00000557626 RPL23P62829 140 aaKnown RBP8.8□□□□□ -1
TMEM260-215ENST00000557626 TMEM241Q24JQ0 296 aa8.8□□□□□ -1
TMEM260-215ENST00000557626 FAM74A3Q4VXF1 159 aa8.8□□□□□ -1
TMEM260-215ENST00000557626 MUC21Q5SSG8 566 aa8.8□□□□□ -1
TMEM260-215ENST00000557626 C10orf91Q5T1B1 145 aa8.8□□□□□ -1
TMEM260-215ENST00000557626 SMIM12Q96EX1 92 aa8.8□□□□□ -1
TMEM260-215ENST00000557626 C20orf144Q9BQM9 153 aa8.8□□□□□ -1
TMEM260-215ENST00000557626 LINC00467Q9BRT7 94 aa8.8□□□□□ -1
TMEM260-215ENST00000557626 TRAV21A0A0B4J279 112 aa8.79□□□□□ -1
TMEM260-215ENST00000557626 FABP5P3A8MUU1 101 aa8.79□□□□□ -1
TMEM260-215ENST00000557626 GNRH2O43555 120 aa8.79□□□□□ -1
TMEM260-215ENST00000557626 RPL19P84098 196 aaKnown RBP8.79□□□□□ -1
TMEM260-215ENST00000557626 TDRG1Q3Y452 100 aa8.79□□□□□ -1
TMEM260-215ENST00000557626 ANXA2RQ3ZCQ2 193 aa8.79□□□□□ -1
TMEM260-215ENST00000557626 LINC01587Q99440 93 aa8.79□□□□□ -1
TMEM260-215ENST00000557626 IGHV1OR15-1A0A075B7D0 117 aa8.78□□□□□ -1
TMEM260-215ENST00000557626 KRBOX1C9JBD0 128 aa8.78□□□□□ -1
TMEM260-215ENST00000557626 H7BYZ3 331 aa8.78□□□□□ -1
TMEM260-215ENST00000557626 MGST1P10620 155 aaKnown RBP8.78□□□□□ -1
TMEM260-215ENST00000557626 FAM162BQ5T6X4 162 aa8.78□□□□□ -1
TMEM260-215ENST00000557626 PRR27Q6MZM9 219 aa8.78□□□□□ -1
TMEM260-215ENST00000557626 C11orf72Q8NBR9 251 aa8.78□□□□□ -1
TMEM260-215ENST00000557626 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
TMEM260-215ENST00000557626 ISOC2Q96AB3 205 aa8.78□□□□□ -1
TMEM260-215ENST00000557626 NUDT11Q96G61 164 aa8.78□□□□□ -1
TMEM260-215ENST00000557626 RNASE7Q9H1E1 156 aaKnown RBP8.78□□□□□ -1
TMEM260-215ENST00000557626 NAT8Q9UHE5 227 aa8.78□□□□□ -1
TMEM260-215ENST00000557626 H3BNG1 76 aa8.77□□□□□ -1.01
TMEM260-215ENST00000557626 ODF1Q14990 250 aa8.77□□□□□ -1.01
TMEM260-215ENST00000557626 LINC01559Q495D7 138 aa8.77□□□□□ -1.01
TMEM260-215ENST00000557626 Q6ZRU5 148 aa8.77□□□□□ -1.01
TMEM260-215ENST00000557626 TMEM256Q8N2U0 113 aa8.77□□□□□ -1.01
TMEM260-215ENST00000557626 RNASE8Q8TDE3 154 aaKnown RBP8.77□□□□□ -1.01
TMEM260-215ENST00000557626 PYGO2Q9BRQ0 406 aa8.77□□□□□ -1.01
TMEM260-215ENST00000557626 CHAC1Q9BUX1 264 aa8.77□□□□□ -1.01
TMEM260-215ENST00000557626 SEC11CQ9BY50 192 aa8.77□□□□□ -1.01
TMEM260-215ENST00000557626 CARHSP1Q9Y2V2 147 aaKnown RBP8.77□□□□□ -1.01
TMEM260-215ENST00000557626 IGHV3-16A0A0C4DH30 117 aa8.76□□□□□ -1.01
TMEM260-215ENST00000557626 M0R036 132 aa8.76□□□□□ -1.01
TMEM260-215ENST00000557626 TYMSP04818 313 aa8.76□□□□□ -1.01
TMEM260-215ENST00000557626 FAM231DQ6ZW35 169 aa8.76□□□□□ -1.01
TMEM260-215ENST00000557626 NAGKQ9UJ70 344 aa8.76□□□□□ -1.01
TMEM260-215ENST00000557626 GRIFINA4D1Z8 144 aa8.75□□□□□ -1.01
TMEM260-215ENST00000557626 F8W036 122 aa8.75□□□□□ -1.01
TMEM260-215ENST00000557626 RNASE3P12724 160 aaKnown RBP8.75□□□□□ -1.01
TMEM260-215ENST00000557626 HTN1P15515 57 aa8.75□□□□□ -1.01
TMEM260-215ENST00000557626 ADIRFQ15847 76 aa8.75□□□□□ -1.01
TMEM260-215ENST00000557626 CIRBP-AS1Q8TBR5 109 aa8.75□□□□□ -1.01
TMEM260-215ENST00000557626 TMSB15BA0A087X1C1 80 aa8.74□□□□□ -1.01
TMEM260-215ENST00000557626 A0A096LPF7 62 aa8.74□□□□□ -1.01
TMEM260-215ENST00000557626 ORM1P02763 201 aa8.74□□□□□ -1.01
TMEM260-215ENST00000557626 GZMBP10144 247 aa8.74□□□□□ -1.01
TMEM260-215ENST00000557626 NDUFA5Q16718 116 aa8.74□□□□□ -1.01
TMEM260-215ENST00000557626 DNLZQ5SXM8 178 aa8.74□□□□□ -1.01
TMEM260-215ENST00000557626 GSN-AS1Q9NRJ2 163 aa8.74□□□□□ -1.01
TMEM260-215ENST00000557626 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
TMEM260-215ENST00000557626 V9GYV3 84 aa8.74□□□□□ -1.01
TMEM260-215ENST00000557626 B4DEV8 164 aa8.73□□□□□ -1.01
TMEM260-215ENST00000557626 HOXA5P20719 270 aa8.73□□□□□ -1.01
TMEM260-215ENST00000557626 FAM159AQ6UWV7 190 aa8.73□□□□□ -1.01
TMEM260-215ENST00000557626 OR2D3Q8NGH3 330 aa8.73□□□□□ -1.01
TMEM260-215ENST00000557626 TMEM263Q8WUH6 116 aaKnown RBP8.73□□□□□ -1.01
TMEM260-215ENST00000557626 C9orf85Q96MD7 179 aa8.73□□□□□ -1.01
TMEM260-215ENST00000557626 P01737 135 aa8.72□□□□□ -1.01
TMEM260-215ENST00000557626 IGLC6P0CF74 106 aa8.72□□□□□ -1.01
TMEM260-215ENST00000557626 TCL1AP56279 114 aa8.72□□□□□ -1.01
TMEM260-215ENST00000557626 IBA57Q5T440 356 aaKnown RBP8.72□□□□□ -1.01
TMEM260-215ENST00000557626 GTSF1Q8WW33 167 aa8.72□□□□□ -1.01
TMEM260-215ENST00000557626 SFRP2Q96HF1 295 aa8.72□□□□□ -1.01
TMEM260-215ENST00000557626 KCNS1Q96KK3 526 aa8.72□□□□□ -1.01
TMEM260-215ENST00000557626 RPP21Q9H633 154 aaKnown RBP8.72□□□□□ -1.01
TMEM260-215ENST00000557626 BIN3Q9NQY0 253 aa8.72□□□□□ -1.01
TMEM260-215ENST00000557626 TIMM8BQ9Y5J9 83 aaPredicted RBP8.72□□□□□ -1.01
TMEM260-215ENST00000557626 K7EP13 123 aa8.71□□□□□ -1.02
TMEM260-215ENST00000557626 CXCL1P09341 107 aa8.71□□□□□ -1.02
TMEM260-215ENST00000557626 SMCPP49901 116 aaPredicted RBP8.71□□□□□ -1.02
TMEM260-215ENST00000557626 PNRC1Q12796 327 aaPredicted RBP8.71□□□□□ -1.02
TMEM260-215ENST00000557626 ZNF493Q6ZR52 646 aa8.71□□□□□ -1.02
TMEM260-215ENST00000557626 LINC00612Q8N6U2 182 aa8.71□□□□□ -1.02
TMEM260-215ENST00000557626 OR10G8Q8NGN5 311 aa8.71□□□□□ -1.02
TMEM260-215ENST00000557626 C16orf74Q96GX8 76 aa8.71□□□□□ -1.02
TMEM260-215ENST00000557626 SSBP4Q9BWG4 385 aaPredicted RBP8.71□□□□□ -1.02
TMEM260-215ENST00000557626 TRGV11A0A075B6L2 103 aa8.7□□□□□ -1.02
TMEM260-215ENST00000557626 SNAI2O43623 268 aa8.7□□□□□ -1.02
TMEM260-215ENST00000557626 GATCO43716 136 aaKnown RBP8.7□□□□□ -1.02
TMEM260-215ENST00000557626 ARMS2P0C7Q2 107 aa8.7□□□□□ -1.02
TMEM260-215ENST00000557626 EVI2AP22794 236 aa8.7□□□□□ -1.02
TMEM260-215ENST00000557626 DAZ2Q13117 558 aaKnown RBP8.7□□□□□ -1.02
TMEM260-215ENST00000557626 ATRAIDQ6UW56 229 aa8.7□□□□□ -1.02
TMEM260-215ENST00000557626 DPH3P1Q9H4G8 78 aa8.7□□□□□ -1.02
TMEM260-215ENST00000557626 NOP10Q9NPE3 64 aaKnown RBP8.7□□□□□ -1.02
TMEM260-215ENST00000557626 H3BVH4 76 aa8.69□□□□□ -1.02
TMEM260-215ENST00000557626 SPINK4O60575 86 aa8.69□□□□□ -1.02
TMEM260-215ENST00000557626 APOC3P02656 99 aa8.69□□□□□ -1.02
TMEM260-215ENST00000557626 LINC01620Q4KN68 170 aa8.69□□□□□ -1.02
TMEM260-215ENST00000557626 CT83Q5H943 113 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms