RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 SFRP2Q96HF1 295 aa8.6□□□□□ -1.03
SLIRP-211ENST00000557623 EIF5A2Q9GZV4 153 aaKnown RBP8.6□□□□□ -1.03
SLIRP-211ENST00000557623 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.6□□□□□ -1.03
SLIRP-211ENST00000557623 TRBV20OR9-2A0A075B6H5 130 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 LOC100131303A0A0U1RQF7 123 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 A0A1W2PPQ1 181 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 SIVA1O15304 175 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 SNAI2O43623 268 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 P01737 135 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 TOR2AQ5JU69 321 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 TEX261Q6UWH6 196 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 OR2D3Q8NGH3 330 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 FAM210AQ96ND0 272 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 JPT2Q9H910 190 aa8.59□□□□□ -1.03
SLIRP-211ENST00000557623 NXPH4O95158 308 aa8.58□□□□□ -1.04
SLIRP-211ENST00000557623 TIRAPP58753 221 aa8.58□□□□□ -1.04
SLIRP-211ENST00000557623 FAM74A4Q5TZK3 123 aa8.58□□□□□ -1.04
SLIRP-211ENST00000557623 SPANXN1Q5VSR9 72 aa8.58□□□□□ -1.04
SLIRP-211ENST00000557623 UFSP1Q6NVU6 142 aa8.58□□□□□ -1.04
SLIRP-211ENST00000557623 SAMD10Q9BYL1 202 aa8.58□□□□□ -1.04
SLIRP-211ENST00000557623 RTL8CO15255 209 aa8.57□□□□□ -1.04
SLIRP-211ENST00000557623 BTF3P20290 206 aaKnown RBP8.57□□□□□ -1.04
SLIRP-211ENST00000557623 C6orf223Q8N319 242 aa8.57□□□□□ -1.04
SLIRP-211ENST00000557623 OR10AG1Q8NH19 301 aa8.57□□□□□ -1.04
SLIRP-211ENST00000557623 OCC1Q8TAD7 63 aa8.57□□□□□ -1.04
SLIRP-211ENST00000557623 A0A087WWL8 130 aa8.56□□□□□ -1.04
SLIRP-211ENST00000557623 PRSS29PA6NIE9 313 aa8.56□□□□□ -1.04
SLIRP-211ENST00000557623 CRYGDP07320 174 aa8.56□□□□□ -1.04
SLIRP-211ENST00000557623 CEBPGP53567 150 aa8.56□□□□□ -1.04
SLIRP-211ENST00000557623 Q6ZSN1 163 aa8.56□□□□□ -1.04
SLIRP-211ENST00000557623 FER1L6-AS1Q8NA97 138 aa8.56□□□□□ -1.04
SLIRP-211ENST00000557623 TRAV9-2A0A087WT02 112 aa8.55□□□□□ -1.04
SLIRP-211ENST00000557623 F2Z2F3 143 aa8.55□□□□□ -1.04
SLIRP-211ENST00000557623 K7EP13 123 aa8.55□□□□□ -1.04
SLIRP-211ENST00000557623 IGLC6P0CF74 106 aa8.55□□□□□ -1.04
SLIRP-211ENST00000557623 CACNG7P62955 275 aa8.55□□□□□ -1.04
SLIRP-211ENST00000557623 NUDT10Q8NFP7 164 aa8.55□□□□□ -1.04
SLIRP-211ENST00000557623 ATP6V0E2Q8NHE4 81 aa8.55□□□□□ -1.04
SLIRP-211ENST00000557623 NUDT11Q96G61 164 aa8.55□□□□□ -1.04
SLIRP-211ENST00000557623 LY96Q9Y6Y9 160 aa8.55□□□□□ -1.04
SLIRP-211ENST00000557623 TRAV8-6A0A0B4J262 113 aa8.54□□□□□ -1.04
SLIRP-211ENST00000557623 TRBV10-1A0A0K0K1A3 114 aa8.54□□□□□ -1.04
SLIRP-211ENST00000557623 K7EN84 100 aa8.54□□□□□ -1.04
SLIRP-211ENST00000557623 SMIM17P0DL12 118 aa8.54□□□□□ -1.04
SLIRP-211ENST00000557623 GZMBP10144 247 aa8.54□□□□□ -1.04
SLIRP-211ENST00000557623 RAB4BP61018 213 aa8.54□□□□□ -1.04
SLIRP-211ENST00000557623 C14orf178Q8N769 122 aaPredicted RBP8.54□□□□□ -1.04
SLIRP-211ENST00000557623 AP1S3Q96PC3 154 aa8.54□□□□□ -1.04
SLIRP-211ENST00000557623 SMIM7Q9BQ49 75 aa8.54□□□□□ -1.04
SLIRP-211ENST00000557623 TPPP3Q9BW30 176 aa8.54□□□□□ -1.04
SLIRP-211ENST00000557623 GTSF1LQ9H1H1 148 aa8.54□□□□□ -1.04
SLIRP-211ENST00000557623 RPP21Q9H633 154 aaKnown RBP8.54□□□□□ -1.04
SLIRP-211ENST00000557623 MUC21A0A0G2JKD1 596 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 MUC21A0A140T8X8 626 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 GAGE12JA6NER3 117 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 ZNF727A8MUV8 499 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 SRP19P09132 144 aaKnown RBP8.53□□□□□ -1.04
SLIRP-211ENST00000557623 EVI2AP22794 236 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 GAGE1Q13065 139 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 GAGE4Q13068 117 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 GAGE5Q13069 117 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 PEA15Q15121 130 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 ZNF56Q15929 161 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 GAGE13Q4V321 117 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 LELP1Q5T871 98 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 WFDC10BQ8IUB3 73 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 RNASE7Q9H1E1 156 aaKnown RBP8.53□□□□□ -1.04
SLIRP-211ENST00000557623 SMDT1Q9H4I9 107 aa8.53□□□□□ -1.04
SLIRP-211ENST00000557623 GATCO43716 136 aaKnown RBP8.52□□□□□ -1.05
SLIRP-211ENST00000557623 DNAH10OSP0CZ25 163 aa8.52□□□□□ -1.05
SLIRP-211ENST00000557623 LINC00694P0DN24 101 aa8.52□□□□□ -1.05
SLIRP-211ENST00000557623 SSTP61278 116 aa8.52□□□□□ -1.05
SLIRP-211ENST00000557623 RPL36AP83881 106 aaKnown RBP8.52□□□□□ -1.05
SLIRP-211ENST00000557623 ANKRD39Q53RE8 183 aa8.52□□□□□ -1.05
SLIRP-211ENST00000557623 OR10J3Q5JRS4 329 aa8.52□□□□□ -1.05
SLIRP-211ENST00000557623 WDR73Q6P4I2 378 aa8.52□□□□□ -1.05
SLIRP-211ENST00000557623 FAM231DQ6ZW35 169 aa8.52□□□□□ -1.05
SLIRP-211ENST00000557623 RPL36ALQ969Q0 106 aaKnown RBP8.52□□□□□ -1.05
SLIRP-211ENST00000557623 KRTAP9-2Q9BYQ4 174 aa8.52□□□□□ -1.05
SLIRP-211ENST00000557623 KRTAP1-5Q9BYS1 174 aa8.52□□□□□ -1.05
SLIRP-211ENST00000557623 A0A087WWC5 75 aa8.51□□□□□ -1.05
SLIRP-211ENST00000557623 IGHV3-38A0A0C4DH36 116 aa8.51□□□□□ -1.05
SLIRP-211ENST00000557623 F5H697 171 aa8.51□□□□□ -1.05
SLIRP-211ENST00000557623 TRGC1P0CF51 173 aa8.51□□□□□ -1.05
SLIRP-211ENST00000557623 ERVFC1-1P60608 527 aa8.51□□□□□ -1.05
SLIRP-211ENST00000557623 FAM74A3Q4VXF1 159 aa8.51□□□□□ -1.05
SLIRP-211ENST00000557623 LYZL1Q6UWQ5 148 aa8.51□□□□□ -1.05
SLIRP-211ENST00000557623 C10orf126Q8N4M7 172 aa8.51□□□□□ -1.05
SLIRP-211ENST00000557623 TRBV7-3A0A075B6L6 115 aa8.5□□□□□ -1.05
SLIRP-211ENST00000557623 A8MWL6 223 aa8.5□□□□□ -1.05
SLIRP-211ENST00000557623 CTRLP40313 264 aa8.5□□□□□ -1.05
SLIRP-211ENST00000557623 LINC01551Q86U37 167 aa8.5□□□□□ -1.05
SLIRP-211ENST00000557623 NFE4Q86UQ8 179 aa8.5□□□□□ -1.05
SLIRP-211ENST00000557623 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.5□□□□□ -1.05
SLIRP-211ENST00000557623 A0A1B0GVY2 172 aa8.49□□□□□ -1.05
SLIRP-211ENST00000557623 NTF3P20783 257 aa8.49□□□□□ -1.05
SLIRP-211ENST00000557623 LINC00315P59091 139 aa8.49□□□□□ -1.05
SLIRP-211ENST00000557623 RAB14P61106 215 aa8.49□□□□□ -1.05
SLIRP-211ENST00000557623 CT83Q5H943 113 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms