RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 STAG3L4Q8TBR4 150 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 RAB37Q96AX2 223 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 FAM103A1Q9BTL3 118 aaKnown RBP2.76□□□□□ -1.97
PRPF39-212ENST00000557477 VSIRQ9H7M9 311 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 PROK2Q9HC23 129 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF355PQ9NSJ1 428 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 C21orf62Q9NYP8 219 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 ZNRD1Q9P1U0 126 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 KLF12Q9Y4X4 402 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 DNAJC15Q9Y5T4 150 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 MPC1Q9Y5U8 109 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 MXRA5Q9NR99 2828 aa2.76□□□□□ -1.97
PRPF39-212ENST00000557477 TLN2Q9Y4G6 2542 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 DNAJC13O75165 2243 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 KIAA1549Q9HCM3 1950 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 A0A0U1RQV1 116 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 FAM236AA0A1B0GUQ0 79 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 FAM236BA0A1B0GV22 79 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 TMEM223A0PJW6 202 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 M0R2P5 195 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 SDCBPO00560 298 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-212ENST00000557477 OVOL1O14753 267 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 PGLYRP1O75594 196 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-212ENST00000557477 DEDDO75618 318 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 LY6HO94772 140 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 IGHV3-7P01780 117 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF688P0C7X2 276 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 SMIM13P0DJ93 91 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 IL3RAP26951 378 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 PRSS3P35030 304 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 PFN2P35080 140 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 SYNJ2BPP57105 145 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 TAS2R45P59539 299 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 UBE2G1P62253 170 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF90Q03938 601 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 EIF4EBP1Q13541 118 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-212ENST00000557477 CEACAM16Q2WEN9 425 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 SPRNQ5BIV9 151 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF678Q5SXM1 525 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 Q5W150 140 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 TMEM14EPQ6UXP3 125 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 SGPP2Q8IWX5 399 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 EXOC3-AS1Q8N2X6 119 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 CLDND2Q8NHS1 167 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 LSM10Q969L4 123 aaKnown RBP2.75□□□□□ -1.97
PRPF39-212ENST00000557477 LINC00526Q96FQ7 95 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 ZC2HC1AQ96GY0 325 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 SLC25A44Q96H78 314 aaPredicted RBP2.75□□□□□ -1.97
PRPF39-212ENST00000557477 C2orf50Q96LR7 162 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 CAMK2N2Q96S95 79 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 AICDAQ9GZX7 198 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 PBOV1Q9GZY1 135 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 DYNLRB1Q9NP97 96 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 VPS13CQ709C8 3753 aa2.75□□□□□ -1.97
PRPF39-212ENST00000557477 HEATR5BQ9P2D3 2071 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 IGHV3-15A0A0B4J1V0 119 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 TRAV1-1A0A0B4J248 108 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 A0A0J9YW62 118 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 C3orf85A0A1B0GTC6 90 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 GRIFINA4D1Z8 144 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 C17orf51A8MQB3 221 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 LY6LH3BQJ8 138 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 CD3DP04234 171 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 COX8AP10176 69 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 BCL2P10415 239 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 LOXP28300 417 aaPredicted RBP2.74□□□□□ -1.97
PRPF39-212ENST00000557477 EFNA4P52798 201 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 PMAIP1Q13794 54 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 RRN3P1Q2M238 152 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 Q499Y3 187 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 NMSQ5H8A3 153 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 FAM27D1Q5T7N8 215 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 MARCH3Q86UD3 253 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 MSRB3Q8IXL7 192 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 GAPTQ8N292 157 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 OR8B3Q8NGG8 313 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 C10orf105Q8TEF2 133 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 DPH3Q96FX2 82 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 PGLYRP3Q96LB9 341 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 OR8B2Q96RD0 313 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 BPESC1Q9GZL8 116 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 ZNF442Q9H7R0 627 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 KCNIP2Q9NS61 270 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 TMEM14AQ9Y6G1 99 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 ARL2-SNX15V9GYD0 113 aa2.74□□□□□ -1.97
PRPF39-212ENST00000557477 SONP18583 2426 aaKnown RBP2.74□□□□□ -1.97
PRPF39-212ENST00000557477 ARID1AO14497 2285 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 DSCAMO60469 2012 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 A0A0J9YXV3 536 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 TRACP01848 142 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 APCSP02743 223 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 RBP4P02753 201 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 CLPSP04118 112 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 CRYGAP11844 174 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 CBLN1P23435 193 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 INSL3P51460 131 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 RPL23P62829 140 aaKnown RBP2.73□□□□□ -1.97
PRPF39-212ENST00000557477 INSL4Q14641 139 aa2.73□□□□□ -1.97
PRPF39-212ENST00000557477 RBMY1FQ15415 496 aaKnown RBP2.73□□□□□ -1.97
PRPF39-212ENST00000557477 VMA21Q3ZAQ7 101 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms