RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 UFSP1Q6NVU6 142 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 NIT1Q86X76 327 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 CYB561D1Q8N8Q1 229 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 BOLA1Q9Y3E2 137 aa9.19□□□□□ -0.94
SLIRP-210ENST00000557431 FGF8P55075 233 aaPredicted RBP9.18□□□□□ -0.94
SLIRP-210ENST00000557431 FAM74A4Q5TZK3 123 aa9.18□□□□□ -0.94
SLIRP-210ENST00000557431 DMRTA1Q5VZB9 504 aa9.18□□□□□ -0.94
SLIRP-210ENST00000557431 TMUB2Q71RG4 321 aa9.18□□□□□ -0.94
SLIRP-210ENST00000557431 TCTE3Q8IZS6 198 aa9.18□□□□□ -0.94
SLIRP-210ENST00000557431 SYT8Q8NBV8 401 aa9.18□□□□□ -0.94
SLIRP-210ENST00000557431 PTH2Q96A98 100 aa9.18□□□□□ -0.94
SLIRP-210ENST00000557431 ZNF471Q9BX82 626 aaPredicted RBP9.18□□□□□ -0.94
SLIRP-210ENST00000557431 EPDR1Q9UM22 224 aa9.18□□□□□ -0.94
SLIRP-210ENST00000557431 A0A087WWL8 130 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 GRIFINA4D1Z8 144 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 MAP1LC3B2A6NCE7 125 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 A8MWV9 139 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 K7EQM0 130 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 M0R036 132 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 TOR2AQ5JU69 321 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 SERTAD4-AS1Q5TG53 156 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 ZFP2Q6ZN57 461 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 MAP1LC3BQ9GZQ8 125 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 PLA2G2DQ9UNK4 145 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 ARL2-SNX15V9GYD0 113 aa9.17□□□□□ -0.94
SLIRP-210ENST00000557431 UBR4Q5T4S7 5183 aa9.16□□□□□ -0.94
SLIRP-210ENST00000557431 UMAD1C9J7I0 102 aa9.16□□□□□ -0.94
SLIRP-210ENST00000557431 PFDN1O60925 122 aa9.16□□□□□ -0.94
SLIRP-210ENST00000557431 ASIPP42127 132 aa9.16□□□□□ -0.94
SLIRP-210ENST00000557431 FHITP49789 147 aa9.16□□□□□ -0.94
SLIRP-210ENST00000557431 EIF5AP63241 154 aaKnown RBP9.16□□□□□ -0.94
SLIRP-210ENST00000557431 Q8N976 141 aa9.16□□□□□ -0.94
SLIRP-210ENST00000557431 URGCP-MRPS24S4R325 110 aa9.16□□□□□ -0.94
SLIRP-210ENST00000557431 FAM74A7A6NL05 159 aa9.15□□□□□ -0.94
SLIRP-210ENST00000557431 UBE2G2P60604 165 aa9.15□□□□□ -0.94
SLIRP-210ENST00000557431 RMI2Q96E14 147 aa9.15□□□□□ -0.94
SLIRP-210ENST00000557431 NKX6-2Q9C056 277 aaPredicted RBP9.15□□□□□ -0.94
SLIRP-210ENST00000557431 A0A087WWC5 75 aa9.14□□□□□ -0.95
SLIRP-210ENST00000557431 TMSB15BA0A087X1C1 80 aa9.14□□□□□ -0.95
SLIRP-210ENST00000557431 B4DEV8 164 aa9.14□□□□□ -0.95
SLIRP-210ENST00000557431 IFNA7P01567 189 aa9.14□□□□□ -0.95
SLIRP-210ENST00000557431 ARMS2P0C7Q2 107 aa9.14□□□□□ -0.95
SLIRP-210ENST00000557431 TPT1P13693 172 aaKnown RBP9.14□□□□□ -0.95
SLIRP-210ENST00000557431 CRIP1P50238 77 aa9.14□□□□□ -0.95
SLIRP-210ENST00000557431 STOML3Q8TAV4 291 aa9.14□□□□□ -0.95
SLIRP-210ENST00000557431 MBD3L1Q8WWY6 194 aa9.14□□□□□ -0.95
SLIRP-210ENST00000557431 COX11Q9Y6N1 276 aa9.14□□□□□ -0.95
SLIRP-210ENST00000557431 OXTP01178 125 aa9.13□□□□□ -0.95
SLIRP-210ENST00000557431 Q86TA4 180 aa9.13□□□□□ -0.95
SLIRP-210ENST00000557431 FAM213BQ8TBF2 198 aa9.13□□□□□ -0.95
SLIRP-210ENST00000557431 DAZAP1Q96EP5 407 aaKnown RBP9.13□□□□□ -0.95
SLIRP-210ENST00000557431 ZC2HC1AQ96GY0 325 aa9.13□□□□□ -0.95
SLIRP-210ENST00000557431 IL36BQ9NZH7 164 aa9.13□□□□□ -0.95
SLIRP-210ENST00000557431 hCG_2014768A0A024R1R8 64 aa9.12□□□□□ -0.95
SLIRP-210ENST00000557431 A0A087WX48 190 aa9.12□□□□□ -0.95
SLIRP-210ENST00000557431 FABP5P3A8MUU1 101 aa9.12□□□□□ -0.95
SLIRP-210ENST00000557431 M0R381 172 aa9.12□□□□□ -0.95
SLIRP-210ENST00000557431 PEX7O00628 323 aa9.12□□□□□ -0.95
SLIRP-210ENST00000557431 SH2D1AO60880 128 aa9.12□□□□□ -0.95
SLIRP-210ENST00000557431 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
SLIRP-210ENST00000557431 SAPCD1Q5SSQ6 148 aa9.12□□□□□ -0.95
SLIRP-210ENST00000557431 SFT2D1Q8WV19 159 aa9.12□□□□□ -0.95
SLIRP-210ENST00000557431 HIST1H2BAQ96A08 127 aa9.12□□□□□ -0.95
SLIRP-210ENST00000557431 KRBOX1C9JBD0 128 aa9.11□□□□□ -0.95
SLIRP-210ENST00000557431 HLA-DQA1P01909 254 aa9.11□□□□□ -0.95
SLIRP-210ENST00000557431 ENHOQ6UWT2 76 aa9.11□□□□□ -0.95
SLIRP-210ENST00000557431 AKAP14Q86UN6 197 aa9.11□□□□□ -0.95
SLIRP-210ENST00000557431 C15orf54Q8N8G6 183 aa9.11□□□□□ -0.95
SLIRP-210ENST00000557431 TMEM262E9PQX1 116 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 PANO1I0J062 215 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 RHODO00212 210 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 PAGE4O60829 102 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 H2AFB1P0C5Y9 115 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 MPV17L2Q567V2 206 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 CST9LP1Q5W188 147 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 ATRAIDQ6UW56 229 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 CLPSL2Q6UWE3 100 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 SFRP2Q96HF1 295 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 TCEAL7Q9BRU2 100 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 C1orf43Q9BWL3 253 aa9.1□□□□□ -0.95
SLIRP-210ENST00000557431 A0A1B0GV50 99 aa9.09□□□□□ -0.95
SLIRP-210ENST00000557431 USP17L23D6RBM5 183 aa9.09□□□□□ -0.95
SLIRP-210ENST00000557431 UBE2D3P61077 147 aa9.09□□□□□ -0.95
SLIRP-210ENST00000557431 UBE2D2P62837 147 aa9.09□□□□□ -0.95
SLIRP-210ENST00000557431 PIK3CD-AS1Q5SR53 167 aa9.09□□□□□ -0.95
SLIRP-210ENST00000557431 EIF5AL1Q6IS14 154 aaKnown RBP9.09□□□□□ -0.95
SLIRP-210ENST00000557431 PHLDA3Q9Y5J5 127 aa9.09□□□□□ -0.95
SLIRP-210ENST00000557431 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.09□□□□□ -0.95
SLIRP-210ENST00000557431 CRPP02741 224 aa9.08□□□□□ -0.96
SLIRP-210ENST00000557431 PRSS1P07477 247 aa9.08□□□□□ -0.96
SLIRP-210ENST00000557431 RAB5CP51148 216 aa9.08□□□□□ -0.96
SLIRP-210ENST00000557431 RPL36AP83881 106 aaKnown RBP9.08□□□□□ -0.96
SLIRP-210ENST00000557431 KCNIP4Q6PIL6 250 aa9.08□□□□□ -0.96
SLIRP-210ENST00000557431 SLC51BQ86UW2 128 aa9.08□□□□□ -0.96
SLIRP-210ENST00000557431 RPL36ALQ969Q0 106 aaKnown RBP9.08□□□□□ -0.96
SLIRP-210ENST00000557431 TRBV6-1A0A0K0K1D8 114 aa9.07□□□□□ -0.96
SLIRP-210ENST00000557431 ANGP03950 147 aaKnown RBP9.07□□□□□ -0.96
SLIRP-210ENST00000557431 SULT1A2P50226 295 aa9.07□□□□□ -0.96
SLIRP-210ENST00000557431 RPL19P84098 196 aaKnown RBP9.07□□□□□ -0.96
SLIRP-210ENST00000557431 ELOBQ15370 118 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms