RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 LGALS1P09382 135 aaKnown RBP1.96□□□□□ -2.1
VRK1-207ENST00000557352 OR10J4P0C629 311 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 NBEAP1P0C6P0 100 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 APELAP0DMC3 54 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 SRP14P37108 136 aaKnown RBP1.96□□□□□ -2.1
VRK1-207ENST00000557352 TPPP2P59282 170 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 PSG9Q00887 426 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 USF2Q15853 346 aaPredicted RBP1.96□□□□□ -2.1
VRK1-207ENST00000557352 TMEM241Q24JQ0 296 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 Q56UQ5 140 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 SPATA31B1PQ5VZV4 182 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 TOMM20LQ6UXN7 152 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 C19orf35Q6ZS72 473 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 FAM231DQ6ZW35 169 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 SIGLECL1Q8N7X8 197 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 TMEM75Q8N9X5 138 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 OR5T1Q8NG75 326 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 RXFP4Q8TDU9 374 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 ZNF418Q8TF45 676 aaPredicted RBP1.96□□□□□ -2.1
VRK1-207ENST00000557352 C4orf3Q8WVX3 66 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 FRZBQ92765 325 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 TVP23CQ96ET8 276 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 FMC1Q96HJ9 113 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 METTL26Q96S19 204 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 SMIM7Q9BQ49 75 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 BIN3Q9NQY0 253 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 DAZ1Q9NQZ3 744 aaKnown RBP1.96□□□□□ -2.1
VRK1-207ENST00000557352 OTORQ9NRC9 128 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 SMCO4Q9NRQ5 59 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 PEF1Q9UBV8 284 aaKnown RBP1.96□□□□□ -2.1
VRK1-207ENST00000557352 RABAC1Q9UI14 185 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 YTHDF2Q9Y5A9 579 aaKnown RBP1.96□□□□□ -2.1
VRK1-207ENST00000557352 LENEPQ9Y5L5 61 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 PUS1Q9Y606 427 aaKnown RBP eCLIP1.96□□□□□ -2.1
VRK1-207ENST00000557352 VWFP04275 2813 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 CUBNO60494 3623 aa1.96□□□□□ -2.1
VRK1-207ENST00000557352 TRBV20OR9-2A0A075B6H5 130 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 TRBV24-1A0A075B6N3 115 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 IGHV7-4-1A0A0J9YVY3 117 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 C7orf77A4D0Y5 90 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 ISLRO14498 428 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 GCGP01275 180 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 LTAP01374 205 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 MT-ND4LP03901 98 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 TCRAP04437 139 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 PYYP10082 97 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 ORM2P19652 201 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 NPPCP23582 126 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 RPL35P42766 123 aaKnown RBP1.95□□□□□ -2.1
VRK1-207ENST00000557352 GALR1P47211 349 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 ATP5G3P48201 142 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 KRTAP12-3P60328 96 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 RPL23P62829 140 aaKnown RBP1.95□□□□□ -2.1
VRK1-207ENST00000557352 COX19Q49B96 90 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 CLEC19AQ6UXS0 136 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 OR8I2Q8N0Y5 310 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 OR4X2Q8NGF9 303 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 ISOC2Q96AB3 205 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 IGF2BP2-AS1Q96M15 143 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 YPEL4Q96NS1 127 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 ODF3Q96PU9 254 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 NDFIP1Q9BT67 221 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 SAV1Q9H4B6 383 aaPredicted RBP1.95□□□□□ -2.1
VRK1-207ENST00000557352 OSTCQ9NRP0 149 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 ZNF586Q9NXT0 402 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 ZNF492Q9P255 531 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 EPDR1Q9UM22 224 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 ZFP30Q9Y2G7 519 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 UFC1Q9Y3C8 167 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 SOX21Q9Y651 276 aaPredicted RBP1.95□□□□□ -2.1
VRK1-207ENST00000557352 COL6A5A8TX70 2615 aa1.95□□□□□ -2.1
VRK1-207ENST00000557352 IGHV3-21A0A0B4J1V1 117 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 TRAV5A0A0B4J249 113 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 TRAV25A0A0B4J276 109 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 A0A1B0GV50 99 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 PLAC8L1A1L4L8 177 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 TMEM213A2RRL7 107 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 PGPA6NDG6 321 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 A8MTW9 85 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 H0Y8G0 127 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 DNASE2O00115 360 aaPredicted RBP1.94□□□□□ -2.1
VRK1-207ENST00000557352 TCF21O43680 179 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 IGLV2-8P01709 118 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 TYMSP04818 313 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 CRYBA1P05813 215 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 IGKV4-1P06312 121 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 PFN1P07737 140 aaKnown RBP1.94□□□□□ -2.1
VRK1-207ENST00000557352 CXCL1P09341 107 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 AKR1C3P42330 323 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 CSN1S1P47710 185 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 GNG4P50150 75 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 FOXA3P55318 350 aaPredicted RBP1.94□□□□□ -2.1
VRK1-207ENST00000557352 UBE2G2P60604 165 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 RPL19P84098 196 aaKnown RBP1.94□□□□□ -2.1
VRK1-207ENST00000557352 DEFA5Q01523 94 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 PSG3Q16557 428 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 RPEL1Q2QD12 228 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 CENPWQ5EE01 88 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 SAPCD1Q5SSQ6 148 aa1.94□□□□□ -2.1
VRK1-207ENST00000557352 Q6AWC8 147 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms