RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 CRIP2P52943 208 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-247ENST00000557311 SYNJ2BPP57105 145 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 TMEM258P61165 79 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 RPL23P62829 140 aaKnown RBP3.62□□□□□ -1.83
ATXN3-247ENST00000557311 CX3CL1P78423 397 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 ZNF90Q03938 601 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 INSL4Q14641 139 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 ODF3L2Q3SX64 289 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 Q499Y3 187 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 Q56UQ5 140 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 NMSQ5H8A3 153 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 GAGE2AQ6NT46 116 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 CD164L2Q6UWJ8 174 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 SH2D6Q7Z4S9 175 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 NPBQ8NG41 125 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 ZC2HC1AQ96GY0 325 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 C9orf85Q96MD7 179 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 OVOL2Q9BRP0 275 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 C5orf66Q9H5L9 145 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 C21orf62Q9NYP8 219 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 V9GY05 133 aa3.62□□□□□ -1.83
ATXN3-247ENST00000557311 IGHV3-43A0A0B4J1X8 118 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 C3orf85A0A1B0GTC6 90 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 LOC107986453A0A1B0GWG9 222 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 A0A1W2PS18 150 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 FCN1O00602 326 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 NDUFA3O95167 84 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 TRGV3P03979 118 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 ATP5G1P05496 136 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 IGHV3-43DP0DP04 118 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 ATP5G3P48201 142 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 NDPQ00604 133 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 TMEM30BQ3MIR4 351 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 TMEM147Q9BVK8 224 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 TMEM222Q9H0R3 208 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 MAP6D1Q9H9H5 199 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 GNG13Q9P2W3 67 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 TP53TG3Q9ULZ0 132 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 KMT2AQ03164 3969 aa3.61□□□□□ -1.83
ATXN3-247ENST00000557311 A0A0J9YWU9 116 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 FAM236AA0A1B0GUQ0 79 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 FAM236BA0A1B0GV22 79 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 CEBPZOSA8MTT3 80 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 H3BUA1 57 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 SPINT2O43291 252 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 NCR2O95944 276 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 TRACP01848 142 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 CD7P09564 240 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 PFN2P35080 140 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 NANOS2P60321 138 aaKnown RBP3.6□□□□□ -1.83
ATXN3-247ENST00000557311 CCL20P78556 96 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 PLGLAQ15195 96 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 KISS1Q15726 138 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 DEFB114Q30KQ6 69 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-247ENST00000557311 AMTNQ6UX39 209 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 MRPL55Q7Z7F7 128 aaKnown RBP3.6□□□□□ -1.83
ATXN3-247ENST00000557311 GAPTQ8N292 157 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 LRTM2Q8N967 370 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 ZNF114Q8NC26 417 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 OR10G8Q8NGN5 311 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 UBALD1Q8TB05 177 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 PHLDA1Q8WV24 401 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-247ENST00000557311 MRPL53Q96EL3 112 aaKnown RBP3.6□□□□□ -1.83
ATXN3-247ENST00000557311 LINC00526Q96FQ7 95 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 VSIRQ9H7M9 311 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 KCNIP2Q9NS61 270 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 ZNF355PQ9NSJ1 428 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 OR2W1Q9Y3N9 320 aa3.6□□□□□ -1.83
ATXN3-247ENST00000557311 TRAV18A0A075B6X5 111 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 TEX50A0A1B0GTY4 177 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 A0A1B0GVY2 172 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 ZFP92A6NM28 416 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 USP17L23D6RBM5 183 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 PRSS46E5RG02 174 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 J3QQQ9 107 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 M0R2P5 195 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 CBLN1P23435 193 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 NMUP48645 174 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 PIGYQ3MUY2 71 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 Q5XG85 94 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 DMKNQ6E0U4 476 aaPredicted RBP3.59□□□□□ -1.83
ATXN3-247ENST00000557311 ZNF497Q6ZNH5 498 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 ZNF833PQ6ZTB9 187 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 EXOC3-AS1Q8N2X6 119 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 ANKRD29Q8N6D5 301 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 TSKUQ8WUA8 353 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 GTSF1Q8WW33 167 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 DPH3Q96FX2 82 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 USMG5Q96IX5 58 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 PGLYRP3Q96LB9 341 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 LINC00479Q96M42 142 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 RNF5Q99942 180 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 GNB1LQ9BYB4 327 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 MRPL20Q9BYC9 149 aaKnown RBP3.59□□□□□ -1.83
ATXN3-247ENST00000557311 SLC39A9Q9NUM3 307 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 SELENOKQ9Y6D0 94 aa3.59□□□□□ -1.83
ATXN3-247ENST00000557311 TNCP24821 2201 aa3.58□□□□□ -1.84
ATXN3-247ENST00000557311 FAM24AA6NFZ4 105 aa3.58□□□□□ -1.84
ATXN3-247ENST00000557311 C15orf61A6NNL5 157 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms