RNA–Protein interactions for RNA: ENST00000557222.5

VRK1-206, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-206ENST00000557222 GCGP01275 180 aa5.68□□□□□ -1.5
VRK1-206ENST00000557222 STAG3L2P0CL84 134 aa5.68□□□□□ -1.5
VRK1-206ENST00000557222 STAG3L3P0CL85 134 aa5.68□□□□□ -1.5
VRK1-206ENST00000557222 ZNF80P51504 273 aaPredicted RBP5.68□□□□□ -1.5
VRK1-206ENST00000557222 GNG5P63218 68 aa5.68□□□□□ -1.5
VRK1-206ENST00000557222 FLI1Q01543 452 aaPredicted RBP5.68□□□□□ -1.5
VRK1-206ENST00000557222 ELOBQ15370 118 aa5.68□□□□□ -1.5
VRK1-206ENST00000557222 TMEM75Q8N9X5 138 aa5.68□□□□□ -1.5
VRK1-206ENST00000557222 OR2G3Q8NGZ4 309 aa5.68□□□□□ -1.5
VRK1-206ENST00000557222 MARVELD1Q9BSK0 173 aa5.68□□□□□ -1.5
VRK1-206ENST00000557222 PARLQ9H300 379 aa5.68□□□□□ -1.5
VRK1-206ENST00000557222 RBFOX3A6NFN3 312 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 RHODO00212 210 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 IGLV2-11P01706 119 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 IGLV2-8P01709 118 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 MBP02144 154 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 ARL14EPLP0DKL9 152 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 S100A4P26447 101 aaKnown RBP5.67□□□□□ -1.5
VRK1-206ENST00000557222 CDC34P49427 236 aaPredicted RBP5.67□□□□□ -1.5
VRK1-206ENST00000557222 KRTAP10-4P60372 401 aaPredicted RBP5.67□□□□□ -1.5
VRK1-206ENST00000557222 RAB2AP61019 212 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 SERF2P84101 59 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 C14orf177Q52M58 125 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 DNLZQ5SXM8 178 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 UFSP1Q6NVU6 142 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 ATRAIDQ6UW56 229 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 SCXQ7RTU7 201 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 DAZ4Q86SG3 579 aaKnown RBP5.67□□□□□ -1.5
VRK1-206ENST00000557222 BAALCQ8WXS3 180 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 SMIM3Q9BZL3 60 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 WFDC1Q9HC57 220 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 DAZ3Q9NR90 486 aaKnown RBP5.67□□□□□ -1.5
VRK1-206ENST00000557222 TMEM167BQ9NRX6 74 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 IL36BQ9NZH7 164 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 EPDR1Q9UM22 224 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 URGCP-MRPS24S4R325 110 aa5.67□□□□□ -1.5
VRK1-206ENST00000557222 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.66□□□□□ -1.5
VRK1-206ENST00000557222 GAGE12JA6NER3 117 aa5.66□□□□□ -1.5
VRK1-206ENST00000557222 FABP5P3A8MUU1 101 aa5.66□□□□□ -1.5
VRK1-206ENST00000557222 UPK1BO75841 260 aa5.66□□□□□ -1.5
VRK1-206ENST00000557222 GCHFRP30047 84 aa5.66□□□□□ -1.5
VRK1-206ENST00000557222 Q0VG73 95 aa5.66□□□□□ -1.5
VRK1-206ENST00000557222 GAGE1Q13065 139 aa5.66□□□□□ -1.5
VRK1-206ENST00000557222 GAGE4Q13068 117 aa5.66□□□□□ -1.5
VRK1-206ENST00000557222 GAGE5Q13069 117 aa5.66□□□□□ -1.5
VRK1-206ENST00000557222 LGALSLQ3ZCW2 172 aaPredicted RBP5.66□□□□□ -1.5
VRK1-206ENST00000557222 NIT1Q86X76 327 aa5.66□□□□□ -1.5
VRK1-206ENST00000557222 SGK494Q96LW2 274 aa5.66□□□□□ -1.5
VRK1-206ENST00000557222 PSMG3Q9BT73 122 aaPredicted RBP5.66□□□□□ -1.5
VRK1-206ENST00000557222 IGKV3D-20A0A0C4DH25 116 aa5.65□□□□□ -1.5
VRK1-206ENST00000557222 TRBV10-1A0A0K0K1A3 114 aa5.65□□□□□ -1.5
VRK1-206ENST00000557222 A0A1W2PRE2 83 aa5.65□□□□□ -1.5
VRK1-206ENST00000557222 LECT2O14960 151 aa5.65□□□□□ -1.5
VRK1-206ENST00000557222 SSNA1O43805 119 aa5.65□□□□□ -1.5
VRK1-206ENST00000557222 EIF3GO75821 320 aaKnown RBP eCLIP5.65□□□□□ -1.5
VRK1-206ENST00000557222 CXorf1O96002 111 aa5.65□□□□□ -1.5
VRK1-206ENST00000557222 ASIPP42127 132 aa5.65□□□□□ -1.5
VRK1-206ENST00000557222 PRNTQ86SH4 94 aa5.65□□□□□ -1.5
VRK1-206ENST00000557222 OR2T35Q8NGX2 323 aa5.65□□□□□ -1.5
VRK1-206ENST00000557222 IGKV2D-24A0A075B6R9 120 aa5.64□□□□□ -1.51
VRK1-206ENST00000557222 A0A087WX48 190 aa5.64□□□□□ -1.51
VRK1-206ENST00000557222 HMGB3O15347 200 aaKnown RBP5.64□□□□□ -1.51
VRK1-206ENST00000557222 KCNIP4Q6PIL6 250 aa5.64□□□□□ -1.51
VRK1-206ENST00000557222 COX8CQ7Z4L0 72 aa5.64□□□□□ -1.51
VRK1-206ENST00000557222 C14orf178Q8N769 122 aaPredicted RBP5.64□□□□□ -1.51
VRK1-206ENST00000557222 CIRBP-AS1Q8TBR5 109 aa5.64□□□□□ -1.51
VRK1-206ENST00000557222 SAMD10Q9BYL1 202 aa5.64□□□□□ -1.51
VRK1-206ENST00000557222 NKX6-2Q9C056 277 aaPredicted RBP5.64□□□□□ -1.51
VRK1-206ENST00000557222 ACTR3CQ9C0K3 210 aaPredicted RBP5.64□□□□□ -1.51
VRK1-206ENST00000557222 TNFSF18Q9UNG2 199 aa5.64□□□□□ -1.51
VRK1-206ENST00000557222 B4DEV8 164 aa5.63□□□□□ -1.51
VRK1-206ENST00000557222 ATP6V0CP27449 155 aa5.63□□□□□ -1.51
VRK1-206ENST00000557222 PKIAP61925 76 aa5.63□□□□□ -1.51
VRK1-206ENST00000557222 OR11H4Q8NGC9 324 aa5.63□□□□□ -1.51
VRK1-206ENST00000557222 HIST1H2BAQ96A08 127 aa5.63□□□□□ -1.51
VRK1-206ENST00000557222 SFRP2Q96HF1 295 aa5.63□□□□□ -1.51
VRK1-206ENST00000557222 Q9UF83 564 aa5.63□□□□□ -1.51
VRK1-206ENST00000557222 KLK12Q9UKR0 248 aa5.63□□□□□ -1.51
VRK1-206ENST00000557222 ZFP30Q9Y2G7 519 aa5.63□□□□□ -1.51
VRK1-206ENST00000557222 KRBOX1C9JBD0 128 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 ARMS2P0C7Q2 107 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 DEFA1P59665 94 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 DEFA3P59666 94 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 RPL36AP83881 106 aaKnown RBP5.62□□□□□ -1.51
VRK1-206ENST00000557222 IFITM3Q01628 133 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 LINC01620Q4KN68 170 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 DGAT2L7PQ6IED9 249 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 OR10G8Q8NGN5 311 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 RPL36ALQ969Q0 106 aaKnown RBP5.62□□□□□ -1.51
VRK1-206ENST00000557222 UBE2WQ96B02 151 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 AQP10Q96PS8 301 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 C1orf43Q9BWL3 253 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 JPT2Q9H910 190 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 ARL2-SNX15V9GYD0 113 aa5.62□□□□□ -1.51
VRK1-206ENST00000557222 TRBV7-3A0A075B6L6 115 aa5.61□□□□□ -1.51
VRK1-206ENST00000557222 TNXBP22105 4242 aa5.61□□□□□ -1.51
VRK1-206ENST00000557222 UBE2D3P61077 147 aa5.61□□□□□ -1.51
VRK1-206ENST00000557222 UBE2D2P62837 147 aa5.61□□□□□ -1.51
VRK1-206ENST00000557222 HSD17B11Q8NBQ5 300 aa5.61□□□□□ -1.51
VRK1-206ENST00000557222 TCEAL7Q9BRU2 100 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms