RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 PSMG3Q9BT73 122 aaPredicted RBP9.65□□□□□ -0.86
CHD8-211ENST00000556833 IL36BQ9NZH7 164 aa9.65□□□□□ -0.86
CHD8-211ENST00000556833 FAT3Q8TDW7 4589 aa9.65□□□□□ -0.87
CHD8-211ENST00000556833 RNF222A6NCQ9 220 aa9.64□□□□□ -0.87
CHD8-211ENST00000556833 CRIP1P50238 77 aa9.64□□□□□ -0.87
CHD8-211ENST00000556833 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
CHD8-211ENST00000556833 Q5BKY6 102 aa9.64□□□□□ -0.87
CHD8-211ENST00000556833 COX11Q9Y6N1 276 aa9.64□□□□□ -0.87
CHD8-211ENST00000556833 KRBOX1C9JBD0 128 aa9.63□□□□□ -0.87
CHD8-211ENST00000556833 TMEM262E9PQX1 116 aa9.63□□□□□ -0.87
CHD8-211ENST00000556833 RHODO00212 210 aa9.63□□□□□ -0.87
CHD8-211ENST00000556833 MBP02144 154 aa9.63□□□□□ -0.87
CHD8-211ENST00000556833 RPL7L1Q6DKI1 246 aaKnown RBP9.63□□□□□ -0.87
CHD8-211ENST00000556833 KCNIP4Q6PIL6 250 aa9.63□□□□□ -0.87
CHD8-211ENST00000556833 PHLDA3Q9Y5J5 127 aa9.63□□□□□ -0.87
CHD8-211ENST00000556833 PKHD1L1Q86WI1 4243 aa9.63□□□□□ -0.87
CHD8-211ENST00000556833 A0A1W2PRE2 83 aa9.62□□□□□ -0.87
CHD8-211ENST00000556833 HLA-DQA1P01909 254 aa9.62□□□□□ -0.87
CHD8-211ENST00000556833 C15orf54Q8N8G6 183 aa9.62□□□□□ -0.87
CHD8-211ENST00000556833 AQP10Q96PS8 301 aa9.62□□□□□ -0.87
CHD8-211ENST00000556833 TPT1P13693 172 aaKnown RBP9.61□□□□□ -0.87
CHD8-211ENST00000556833 SERF2P84101 59 aa9.61□□□□□ -0.87
CHD8-211ENST00000556833 CLPSL2Q6UWE3 100 aa9.61□□□□□ -0.87
CHD8-211ENST00000556833 TNFSF18Q9UNG2 199 aa9.61□□□□□ -0.87
CHD8-211ENST00000556833 MUC21A0A0G2JKD1 596 aa9.6□□□□□ -0.87
CHD8-211ENST00000556833 MUC21A0A140T8X8 626 aa9.6□□□□□ -0.87
CHD8-211ENST00000556833 FAM74A7A6NL05 159 aa9.6□□□□□ -0.87
CHD8-211ENST00000556833 HNRNPA3P51991 378 aaKnown RBP9.6□□□□□ -0.87
CHD8-211ENST00000556833 SSTP61278 116 aa9.6□□□□□ -0.87
CHD8-211ENST00000556833 RPL36AP83881 106 aaKnown RBP9.6□□□□□ -0.87
CHD8-211ENST00000556833 PIK3CD-AS1Q5SR53 167 aa9.6□□□□□ -0.87
CHD8-211ENST00000556833 FAM162BQ5T6X4 162 aa9.6□□□□□ -0.87
CHD8-211ENST00000556833 RPL36ALQ969Q0 106 aaKnown RBP9.6□□□□□ -0.87
CHD8-211ENST00000556833 SFRP2Q96HF1 295 aa9.6□□□□□ -0.87
CHD8-211ENST00000556833 C1orf43Q9BWL3 253 aa9.6□□□□□ -0.87
CHD8-211ENST00000556833 HMCN2Q8NDA2 5059 aa9.6□□□□□ -0.87
CHD8-211ENST00000556833 FXYD6-FXYD2A0A087WZ82 144 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 CTXND1A0A1B0GTU2 59 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 CRPP02741 224 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 ANGP03950 147 aaKnown RBP9.59□□□□□ -0.87
CHD8-211ENST00000556833 SEC11BP0C7V7 166 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 UBE2D3P61077 147 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 RPL37AP61513 92 aaKnown RBP9.59□□□□□ -0.87
CHD8-211ENST00000556833 UBE2G1P62253 170 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 UBE2D2P62837 147 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 ZNF56Q15929 161 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 MPV17L2Q567V2 206 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 SERTAD4-AS1Q5TG53 156 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 ENHOQ6UWT2 76 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 MED28Q9H204 178 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 PLA2G2DQ9UNK4 145 aa9.59□□□□□ -0.87
CHD8-211ENST00000556833 USP17L23D6RBM5 183 aa9.58□□□□□ -0.88
CHD8-211ENST00000556833 RPL19P84098 196 aaKnown RBP9.58□□□□□ -0.88
CHD8-211ENST00000556833 ELOBQ15370 118 aa9.58□□□□□ -0.88
CHD8-211ENST00000556833 ZFP82Q8N141 532 aa9.58□□□□□ -0.88
CHD8-211ENST00000556833 TRBV7-3A0A075B6L6 115 aa9.57□□□□□ -0.88
CHD8-211ENST00000556833 DNLZQ5SXM8 178 aa9.57□□□□□ -0.88
CHD8-211ENST00000556833 AKR1C8PQ5T2L2 129 aa9.57□□□□□ -0.88
CHD8-211ENST00000556833 CST9LP1Q5W188 147 aa9.57□□□□□ -0.88
CHD8-211ENST00000556833 CHCHD5Q9BSY4 110 aa9.57□□□□□ -0.88
CHD8-211ENST00000556833 UBR4Q5T4S7 5183 aa9.57□□□□□ -0.88
CHD8-211ENST00000556833 BORCS7-ASMTA0A0B4J1R7 106 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 MAP1LC3B2A6NCE7 125 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 PTTG1O95997 202 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 OXTP01178 125 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 Q0VG73 95 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 ATRAIDQ6UW56 229 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 INO80EQ8NBZ0 244 aaPredicted RBP9.56□□□□□ -0.88
CHD8-211ENST00000556833 NEXN-AS1Q8NBZ9 246 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 OR10AG1Q8NH19 301 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 HIST1H2BAQ96A08 127 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 FMC1Q96HJ9 113 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 MAP1LC3BQ9GZQ8 125 aa9.56□□□□□ -0.88
CHD8-211ENST00000556833 TRBV6-8A0A0A6YYG3 113 aa9.55□□□□□ -0.88
CHD8-211ENST00000556833 TRBV10-1A0A0K0K1A3 114 aa9.55□□□□□ -0.88
CHD8-211ENST00000556833 A0A1B0GV50 99 aa9.55□□□□□ -0.88
CHD8-211ENST00000556833 A6NHS1 94 aa9.55□□□□□ -0.88
CHD8-211ENST00000556833 PRSS1P07477 247 aa9.55□□□□□ -0.88
CHD8-211ENST00000556833 AKR1C3P42330 323 aa9.55□□□□□ -0.88
CHD8-211ENST00000556833 ZNF674Q2M3X9 581 aa9.55□□□□□ -0.88
CHD8-211ENST00000556833 C14orf177Q52M58 125 aa9.55□□□□□ -0.88
CHD8-211ENST00000556833 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
CHD8-211ENST00000556833 CHCHD7Q9BUK0 85 aa9.55□□□□□ -0.88
CHD8-211ENST00000556833 ZFP30Q9Y2G7 519 aa9.55□□□□□ -0.88
CHD8-211ENST00000556833 PANO1I0J062 215 aa9.54□□□□□ -0.88
CHD8-211ENST00000556833 GAGE6Q13070 117 aa9.54□□□□□ -0.88
CHD8-211ENST00000556833 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.54□□□□□ -0.88
CHD8-211ENST00000556833 F5H697 171 aa9.53□□□□□ -0.88
CHD8-211ENST00000556833 LTAP01374 205 aa9.53□□□□□ -0.88
CHD8-211ENST00000556833 STOML3Q8TAV4 291 aa9.53□□□□□ -0.88
CHD8-211ENST00000556833 IGLV10-54A0A075B6I4 117 aa9.52□□□□□ -0.89
CHD8-211ENST00000556833 FHITP49789 147 aa9.52□□□□□ -0.89
CHD8-211ENST00000556833 PRR27Q6MZM9 219 aa9.52□□□□□ -0.89
CHD8-211ENST00000556833 PAGE4O60829 102 aa9.51□□□□□ -0.89
CHD8-211ENST00000556833 GIPP09681 153 aaPredicted RBP9.51□□□□□ -0.89
CHD8-211ENST00000556833 RAB4BP61018 213 aa9.51□□□□□ -0.89
CHD8-211ENST00000556833 NTM-AS1Q6ZSK4 140 aa9.51□□□□□ -0.89
CHD8-211ENST00000556833 COX8CQ7Z4L0 72 aa9.51□□□□□ -0.89
CHD8-211ENST00000556833 LINC00269Q8N2A0 174 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms