RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 VCYO14598 125 aa5.01□□□□□ -1.61
SCFD1-222ENST00000556768 S100A9P06702 114 aaKnown RBP5.01□□□□□ -1.61
SCFD1-222ENST00000556768 GATA1P15976 413 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-222ENST00000556768 ERVFC1-1P60608 527 aa5.01□□□□□ -1.61
SCFD1-222ENST00000556768 PIK3CD-AS1Q5SR53 167 aa5.01□□□□□ -1.61
SCFD1-222ENST00000556768 EIF5AL1Q6IS14 154 aaKnown RBP5.01□□□□□ -1.61
SCFD1-222ENST00000556768 SPATA12Q7Z6I5 190 aa5.01□□□□□ -1.61
SCFD1-222ENST00000556768 ZNF575Q86XF7 245 aa5.01□□□□□ -1.61
SCFD1-222ENST00000556768 SLC25A29Q8N8R3 303 aa5.01□□□□□ -1.61
SCFD1-222ENST00000556768 MLST8Q9BVC4 326 aa5.01□□□□□ -1.61
SCFD1-222ENST00000556768 KRTAP1-5Q9BYS1 174 aa5.01□□□□□ -1.61
SCFD1-222ENST00000556768 MUC4Q99102 2169 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 IGHV3-73A0A0B4J1V6 119 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 IGHV3-38A0A0C4DH36 116 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 SMLR1H3BR10 107 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 RS1O15537 224 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 CRYGDP07320 174 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 VPREB1P12018 145 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 OR10J3Q5JRS4 329 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 ZNF506Q5JVG8 444 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 DPPA3Q6W0C5 159 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 ZFP2Q6ZN57 461 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 OCC1Q8TAD7 63 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 FAM213BQ8TBF2 198 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 C9orf85Q96MD7 179 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 CYTL1Q9NRR1 136 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 IL36BQ9NZH7 164 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 C11orf21Q9P2W6 132 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 PHLDA3Q9Y5J5 127 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 DNAH11Q96DT5 4516 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 G3V3Q6 166 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 PSCAO43653 123 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 DNAH10OSP0CZ25 163 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 RNASE3P12724 160 aaKnown RBP5□□□□□ -1.61
SCFD1-222ENST00000556768 TPT1P13693 172 aaKnown RBP5□□□□□ -1.61
SCFD1-222ENST00000556768 AKR1C3P42330 323 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 Q86TA4 180 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 MSRB1Q9NZV6 116 aa5□□□□□ -1.61
SCFD1-222ENST00000556768 IGKV3D-20A0A0C4DH25 116 aa4.99□□□□□ -1.61
SCFD1-222ENST00000556768 M0R036 132 aa4.99□□□□□ -1.61
SCFD1-222ENST00000556768 RHODO00212 210 aa4.99□□□□□ -1.61
SCFD1-222ENST00000556768 BCL2L11O43521 198 aa4.99□□□□□ -1.61
SCFD1-222ENST00000556768 CDK2AP2O75956 126 aa4.99□□□□□ -1.61
SCFD1-222ENST00000556768 WFDC10BQ8IUB3 73 aa4.99□□□□□ -1.61
SCFD1-222ENST00000556768 OR11H4Q8NGC9 324 aa4.99□□□□□ -1.61
SCFD1-222ENST00000556768 ATP6V0E2Q8NHE4 81 aa4.99□□□□□ -1.61
SCFD1-222ENST00000556768 GTSF1LQ9H1H1 148 aa4.99□□□□□ -1.61
SCFD1-222ENST00000556768 A0A087WWC5 75 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 TRBV6-1A0A0K0K1D8 114 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 LOC100131303A0A0U1RQF7 123 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 A0A1B0GV50 99 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 KRBOX1C9JBD0 128 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 SH2D1AO60880 128 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 LTAP01374 205 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 ARMS2P0C7Q2 107 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 RAB5CP51148 216 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 COX8CQ7Z4L0 72 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 MBD3L1Q8WWY6 194 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 ZC2HC1AQ96GY0 325 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 NACAE9PAV3 2078 aa4.98□□□□□ -1.61
SCFD1-222ENST00000556768 H3BVH4 76 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 LELP1Q5T871 98 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 FAM74A4Q5TZK3 123 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 TMUB2Q71RG4 321 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 BAGE2Q86Y30 109 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 ZFP82Q8N141 532 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-222ENST00000556768 URGCP-MRPS24S4R325 110 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 DYNC1H1Q14204 4646 aaKnown RBP4.97□□□□□ -1.61
SCFD1-222ENST00000556768 TMSB15BA0A087X1C1 80 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 GRIFINA4D1Z8 144 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 M0R381 172 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 CRIP1P50238 77 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 LINC01556Q5JQF7 62 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 DNLZQ5SXM8 178 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 KCNIP4Q6PIL6 250 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 PARLQ9H300 379 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 MANBALQ9NQG1 85 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 TNFRSF18Q9Y5U5 241 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 PCLOQ9Y6V0 5065 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 RYR1P21817 5038 aa4.97□□□□□ -1.61
SCFD1-222ENST00000556768 LRP1BQ9NZR2 4599 aa4.96□□□□□ -1.61
SCFD1-222ENST00000556768 GAGE12JA6NER3 117 aa4.96□□□□□ -1.62
SCFD1-222ENST00000556768 C5orf52A6NGY3 159 aa4.96□□□□□ -1.62
SCFD1-222ENST00000556768 FOXI1Q12951 378 aa4.96□□□□□ -1.62
SCFD1-222ENST00000556768 GAGE1Q13065 139 aa4.96□□□□□ -1.62
SCFD1-222ENST00000556768 GAGE4Q13068 117 aa4.96□□□□□ -1.62
SCFD1-222ENST00000556768 GAGE5Q13069 117 aa4.96□□□□□ -1.62
SCFD1-222ENST00000556768 Q6ZRN7 208 aaPredicted RBP4.96□□□□□ -1.62
SCFD1-222ENST00000556768 GNG13Q9P2W3 67 aa4.96□□□□□ -1.62
SCFD1-222ENST00000556768 DNAH5Q8TE73 4624 aa4.96□□□□□ -1.62
SCFD1-222ENST00000556768 TRAV8-3A0A0A6YYJ7 113 aa4.95□□□□□ -1.62
SCFD1-222ENST00000556768 IBA57-AS1B1ANH7 110 aa4.95□□□□□ -1.62
SCFD1-222ENST00000556768 KRTAP10-2P60368 255 aa4.95□□□□□ -1.62
SCFD1-222ENST00000556768 SPANXN1Q5VSR9 72 aa4.95□□□□□ -1.62
SCFD1-222ENST00000556768 PRR27Q6MZM9 219 aa4.95□□□□□ -1.62
SCFD1-222ENST00000556768 MAPKAPK5-AS1Q8N8E1 139 aa4.95□□□□□ -1.62
SCFD1-222ENST00000556768 SFRP2Q96HF1 295 aa4.95□□□□□ -1.62
SCFD1-222ENST00000556768 A0A087WTM6 91 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms