RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 SRP19P09132 144 aaKnown RBP6.66□□□□□ -1.34
SRP54-210ENST00000556380 TOR2AQ5JU69 321 aa6.66□□□□□ -1.34
SRP54-210ENST00000556380 ZFP2Q6ZN57 461 aa6.66□□□□□ -1.34
SRP54-210ENST00000556380 Q6ZSN1 163 aa6.66□□□□□ -1.34
SRP54-210ENST00000556380 ZNRF2Q8NHG8 242 aa6.66□□□□□ -1.34
SRP54-210ENST00000556380 SAMD10Q9BYL1 202 aa6.66□□□□□ -1.34
SRP54-210ENST00000556380 EIF5A2Q9GZV4 153 aaKnown RBP6.66□□□□□ -1.34
SRP54-210ENST00000556380 PARLQ9H300 379 aa6.66□□□□□ -1.34
SRP54-210ENST00000556380 A8MWV9 139 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 C9JQL5 133 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 K7EQD1 137 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 CRYGDP07320 174 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 OR5AL1P0C617 328 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 MGST1P10620 155 aaKnown RBP6.65□□□□□ -1.34
SRP54-210ENST00000556380 CCL18P55774 89 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 RAB14P61106 215 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 MRPL23Q16540 153 aaKnown RBP6.65□□□□□ -1.34
SRP54-210ENST00000556380 Q6ZR54 194 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 SLC25A29Q8N8R3 303 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 SFRP2Q96HF1 295 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 PHLDA3Q9Y5J5 127 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 LY96Q9Y6Y9 160 aa6.65□□□□□ -1.34
SRP54-210ENST00000556380 IGHV3-73A0A0B4J1V6 119 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 LOC100131303A0A0U1RQF7 123 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 TRBV6-4A0A1B0GX49 114 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 IGLC6P0CF74 106 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 GZMBP10144 247 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 GYPEP15421 78 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 RPS20P60866 119 aaKnown RBP6.64□□□□□ -1.35
SRP54-210ENST00000556380 FAM74A3Q4VXF1 159 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 LYPD5Q6UWN5 251 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 UBE2DNLQ8IWF7 75 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 SYT8Q8NBV8 401 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 NUDT10Q8NFP7 164 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 OR2D3Q8NGH3 330 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 OR10AG1Q8NH19 301 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 DAZAP1Q96EP5 407 aaKnown RBP6.64□□□□□ -1.35
SRP54-210ENST00000556380 NUDT11Q96G61 164 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 UPK3BQ9BT76 320 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 ICOSQ9Y6W8 199 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 PKD1P98161 4303 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 DNAH11Q96DT5 4516 aa6.64□□□□□ -1.35
SRP54-210ENST00000556380 XKRY2A2RUG3 117 aa6.63□□□□□ -1.35
SRP54-210ENST00000556380 PEA15Q15121 130 aa6.63□□□□□ -1.35
SRP54-210ENST00000556380 ZFP82Q8N141 532 aa6.63□□□□□ -1.35
SRP54-210ENST00000556380 Q9UF83 564 aa6.63□□□□□ -1.35
SRP54-210ENST00000556380 MRPS16Q9Y3D3 137 aaKnown RBP6.63□□□□□ -1.35
SRP54-210ENST00000556380 IGLV2-18A0A075B6J9 118 aa6.62□□□□□ -1.35
SRP54-210ENST00000556380 MUC21A0A0G2JKD1 596 aa6.62□□□□□ -1.35
SRP54-210ENST00000556380 MUC21A0A140T8X8 626 aa6.62□□□□□ -1.35
SRP54-210ENST00000556380 M0R381 172 aa6.62□□□□□ -1.35
SRP54-210ENST00000556380 P01737 135 aa6.62□□□□□ -1.35
SRP54-210ENST00000556380 IFITM2Q01629 132 aa6.62□□□□□ -1.35
SRP54-210ENST00000556380 NEGR1Q7Z3B1 354 aa6.62□□□□□ -1.35
SRP54-210ENST00000556380 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
SRP54-210ENST00000556380 RNASE7Q9H1E1 156 aaKnown RBP6.62□□□□□ -1.35
SRP54-210ENST00000556380 Q9H8V8 135 aa6.62□□□□□ -1.35
SRP54-210ENST00000556380 KIF25-AS1Q9Y6Z4 181 aa6.62□□□□□ -1.35
SRP54-210ENST00000556380 A0A087WWL8 130 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 ZNF727A8MUV8 499 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 M0R2N4 97 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 RHODO00212 210 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 LINC00694P0DN24 101 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 SRIP30626 198 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 CEBPGP53567 150 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 TIRAPP58753 221 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 LINC00315P59091 139 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 RHOHQ15669 191 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 CLLU1Q5K131 121 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 FAM231DQ6ZW35 169 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 LINC01551Q86U37 167 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 C14orf178Q8N769 122 aaPredicted RBP6.61□□□□□ -1.35
SRP54-210ENST00000556380 FER1L6-AS1Q8NA97 138 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 SMIM7Q9BQ49 75 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 PRADC1Q9BSG0 188 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 KRTAP4-5Q9BYR2 181 aa6.61□□□□□ -1.35
SRP54-210ENST00000556380 NBDYA0A0U1RRE5 68 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 A0A1W2PPQ1 181 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 F2Z2F3 143 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 CTRLP40313 264 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 CT83Q5H943 113 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 WDR73Q6P4I2 378 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 LYZL1Q6UWQ5 148 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 SH2D6Q7Z4S9 175 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 GTSF1Q8WW33 167 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 CNFNQ9BYD5 112 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 KRTAP1-5Q9BYS1 174 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 RPP21Q9H633 154 aaKnown RBP6.6□□□□□ -1.35
SRP54-210ENST00000556380 MSRB1Q9NZV6 116 aa6.6□□□□□ -1.35
SRP54-210ENST00000556380 BIRC6Q9NR09 4857 aa6.59□□□□□ -1.35
SRP54-210ENST00000556380 RTL8CO15255 209 aa6.59□□□□□ -1.35
SRP54-210ENST00000556380 FAM74A4Q5TZK3 123 aa6.59□□□□□ -1.35
SRP54-210ENST00000556380 SPANXN1Q5VSR9 72 aa6.59□□□□□ -1.35
SRP54-210ENST00000556380 AP5S1Q9NUS5 200 aa6.59□□□□□ -1.35
SRP54-210ENST00000556380 PKHD1P08F94 4074 aa6.59□□□□□ -1.35
SRP54-210ENST00000556380 FAM231BA6NCW3 169 aa6.58□□□□□ -1.36
SRP54-210ENST00000556380 GATCO43716 136 aaKnown RBP6.58□□□□□ -1.36
SRP54-210ENST00000556380 FOXA3P55318 350 aaPredicted RBP6.58□□□□□ -1.36
SRP54-210ENST00000556380 RAB4BP61018 213 aa6.58□□□□□ -1.36
SRP54-210ENST00000556380 SSTP61278 116 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms