RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 PYYP10082 97 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 ORM2P19652 201 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 NTF3P20783 257 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 GATA2P23769 480 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-240ENST00000556339 FCGR2BP31994 310 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-240ENST00000556339 BMI1P35226 326 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 TCL1AP56279 114 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 SEC11AP67812 179 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 RHOGP84095 191 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 HIST1H1AQ02539 215 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-240ENST00000556339 KIAA1644Q3SXP7 199 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 TDRG1Q3Y452 100 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 LINC01545Q5VT33 79 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 LEMD1Q68G75 181 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 EBLN2Q6P2I7 272 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 RNASEKQ6P5S7 137 aaKnown RBP2.93□□□□□ -1.94
ATXN3-240ENST00000556339 SLC25A34Q6PIV7 304 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 Q86TA4 180 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 OR1B1Q8NGR6 318 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 SHANK2-AS3Q9BTD1 123 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 SLC25A39Q9BZJ4 359 aaPredicted RBP2.93□□□□□ -1.94
ATXN3-240ENST00000556339 CLEC5AQ9NY25 188 aa2.93□□□□□ -1.94
ATXN3-240ENST00000556339 LCE6AA0A183 80 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 FAM223BA6NKX1 122 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 OR11H12B2RN74 326 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 E7EUB6 86 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 H3BRN7 92 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 SPINK4O60575 86 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 TRBV12-3P01733 135 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 IGHV3-23P01764 117 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 MYOD1P15172 320 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 RPL7P18124 248 aaKnown RBP2.92□□□□□ -1.94
ATXN3-240ENST00000556339 G0S2P27469 103 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 ARL3P36405 182 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 CAMPP49913 170 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 PSG3Q16557 428 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 LGALS9BQ3B8N2 356 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 GDF5OSQ5U4N7 250 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 LGALS9CQ6DKI2 356 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 PRR27Q6MZM9 219 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 ADAMTSL5Q6ZMM2 481 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 FAM223AQ8IWN6 122 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 FAM19A2Q8N3H0 131 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 DEFB125Q8N687 156 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 STPG4Q8N801 248 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 OR2K2Q8NGT1 345 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 GTSF1Q8WW33 167 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 SRSF12Q8WXF0 261 aaKnown RBP2.92□□□□□ -1.94
ATXN3-240ENST00000556339 EEF1AKMT3Q96AZ1 226 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 LINC00479Q96M42 142 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 FAM110AQ9BQ89 295 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 TM2D3Q9BRN9 247 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 PSG8Q9UQ74 426 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 SELENOKQ9Y6D0 94 aa2.92□□□□□ -1.94
ATXN3-240ENST00000556339 TRAV34A0A0B4J273 112 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 IGHV1-24A0A0C4DH33 117 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 RBAKDNA6NC62 111 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 A6NDN8 102 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 LINC01546A6NGU7 62 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 A8MZ25 164 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 GAGE7O76087 117 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 CA1P00915 261 aaPredicted RBP2.91□□□□□ -1.94
ATXN3-240ENST00000556339 IGKV1-17P01599 117 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 PRSS1P07477 247 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 GAGE12FP0CL80 117 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 GAGE12GP0CL81 117 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 GAGE12IP0CL82 117 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 COX8AP10176 69 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 HLA-DRB4P13762 266 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 CDKN1BP46527 198 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 MFAP4P55083 255 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 LYZP61626 148 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 GAGE4Q13068 117 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 BATFQ16520 125 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 DEFB114Q30KQ6 69 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 C15orf32Q32M92 178 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 Q56UQ5 140 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 FAM104BQ5XKR9 115 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 CLEC19AQ6UXS0 136 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 SIGLEC15Q6ZMC9 328 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 FA2HQ7L5A8 372 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 TCF24Q7RTU0 167 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 BOD1L2Q8IYS8 172 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 ORMDL3Q8N138 153 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 TTC9CQ8N5M4 171 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 BLNKQ8WV28 456 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 MRPL53Q96EL3 112 aaKnown RBP2.91□□□□□ -1.94
ATXN3-240ENST00000556339 RNF125Q96EQ8 232 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 PGLYRP4Q96LB8 373 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 CNFNQ9BYD5 112 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 RETNQ9HD89 108 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 SIGLEC8Q9NYZ4 499 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 MRPL36Q9P0J6 103 aaKnown RBP2.91□□□□□ -1.94
ATXN3-240ENST00000556339 SMPXQ9UHP9 88 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 RABAC1Q9UI14 185 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 S4R3C0 116 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 HLA-DRB4X5D2U9 266 aa2.91□□□□□ -1.94
ATXN3-240ENST00000556339 DYNC2H1Q8NCM8 4307 aaKnown RBP2.9□□□□□ -1.95
ATXN3-240ENST00000556339 IGLV11-55A0A075B6I3 123 aa2.9□□□□□ -1.95
ATXN3-240ENST00000556339 A0A087X0K7 114 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms