RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 RNF24Q9Y225 148 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 WDR83OSQ9Y284 106 aa3.18□□□□□ -1.9
ATXN3-239ENST00000556315 RCL1Q9Y2P8 373 aaKnown RBP3.18□□□□□ -1.9
ATXN3-239ENST00000556315 LSM5Q9Y4Y9 91 aaKnown RBP3.18□□□□□ -1.9
ATXN3-239ENST00000556315 IGHV3-38A0A0C4DH36 116 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 H3BRN7 92 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 K7EQD1 137 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 M0R036 132 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 HYPMO75409 117 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 EIF3GO75821 320 aaKnown RBP eCLIP3.17□□□□□ -1.9
ATXN3-239ENST00000556315 IFNA1P01562 189 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 IGHV3-53P01767 116 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 MBP02144 154 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 ORM1P02763 201 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 CT45A10P0DMU9 189 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 GATA2P23769 480 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-239ENST00000556315 ASIPP42127 132 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 RPL35P42766 123 aaKnown RBP3.17□□□□□ -1.9
ATXN3-239ENST00000556315 SULT1A1P50225 295 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 PPT1P50897 306 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 HBG1P69891 147 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 HBG2P69892 147 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 AKR1C1Q04828 323 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 ATP6V1FQ16864 119 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 AKR1C8PQ5T2L2 129 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 SH2D6Q7Z4S9 175 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 LYZL2Q7Z4W2 148 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 STX12Q86Y82 276 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 TMEM252Q8N6L7 170 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 C11orf72Q8NBR9 251 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 OR2G3Q8NGZ4 309 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 CIRBP-AS1Q8TBR5 109 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 MBD3L1Q8WWY6 194 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 TVP23CQ96ET8 276 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 ODF3Q96PU9 254 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 ATP5SQ99766 215 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 TXNDC17Q9BRA2 123 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 DNAJC4Q9NNZ3 241 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 HIGD1AQ9Y241 93 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 KLF12Q9Y4X4 402 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 TIMM9Q9Y5J7 89 aa3.17□□□□□ -1.9
ATXN3-239ENST00000556315 TRGV4A0A0C4DH28 118 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 C9JQL5 133 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 HMGB3O15347 200 aaKnown RBP3.16□□□□□ -1.9
ATXN3-239ENST00000556315 IGLV2-8P01709 118 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 SLC25A5P05141 298 aaKnown RBP3.16□□□□□ -1.9
ATXN3-239ENST00000556315 SRP19P09132 144 aaKnown RBP3.16□□□□□ -1.9
ATXN3-239ENST00000556315 CFC1BP0CG36 223 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 CFC1P0CG37 223 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 MT1HL1P0DM35 61 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 PRB4P10163 310 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-239ENST00000556315 ATP6V0CP27449 155 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 S100A2P29034 98 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 TCL1AP56279 114 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 PLP1P60201 277 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 LBHQ53QV2 105 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-239ENST00000556315 LINC01556Q5JQF7 62 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 FFAR4Q5NUL3 377 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 LCN15Q6UWW0 184 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 FAM213BQ8TBF2 198 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 SCGB1C1Q8TD33 95 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 VGLL1Q99990 258 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 SLC50A1Q9BRV3 221 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 Q9HAA7 133 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 WFDC1Q9HC57 220 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 ZNF331Q9NQX6 463 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-239ENST00000556315 LRP2P98164 4655 aa3.16□□□□□ -1.9
ATXN3-239ENST00000556315 RNF213Q63HN8 5207 aa3.15□□□□□ -1.9
ATXN3-239ENST00000556315 TRBV24-1A0A075B6N3 115 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 TRAV8-6A0A0B4J262 113 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 C7orf71A4D174 169 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 PCP4L1A6NKN8 68 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 TMEM250H0YL14 139 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 H3BQ15 152 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 AGPAT2O15120 278 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 MRPS12O15235 138 aaKnown RBP3.15□□□□□ -1.91
ATXN3-239ENST00000556315 MPDU1O75352 247 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 OR5G3P0C626 314 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 RPL37AP61513 92 aaKnown RBP3.15□□□□□ -1.91
ATXN3-239ENST00000556315 SELENOTP62341 195 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 FABP9Q0Z7S8 132 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 IBA57Q5T440 356 aaKnown RBP3.15□□□□□ -1.91
ATXN3-239ENST00000556315 PET117Q6UWS5 81 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 CYP2G1PQ6ZSU1 146 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 HSD17B11Q8NBQ5 300 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 OR5C1Q8NGR4 320 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 BLNKQ8WV28 456 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 TMEM37Q8WXS4 190 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 CIB3Q96Q77 187 aaPredicted RBP3.15□□□□□ -1.91
ATXN3-239ENST00000556315 LITAFQ99732 161 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 SMIM3Q9BZL3 60 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 MRPL16Q9NX20 251 aaKnown RBP3.15□□□□□ -1.91
ATXN3-239ENST00000556315 VAX2Q9UIW0 290 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 PXMP4Q9Y6I8 212 aa3.15□□□□□ -1.91
ATXN3-239ENST00000556315 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.14□□□□□ -1.91
ATXN3-239ENST00000556315 TRAV8-3A0A0A6YYJ7 113 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 IGSF23A1L1A6 192 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 SMCO3A2RU48 225 aa3.14□□□□□ -1.91
ATXN3-239ENST00000556315 FAM24AA6NFZ4 105 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms