RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 FABP5P3A8MUU1 101 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 GGTLC3B5MD39 225 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 M0R036 132 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 IFNA1P01562 189 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 APOC3P02656 99 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 MGST1P10620 155 aaKnown RBP3.27□□□□□ -1.89
ATXN3-238ENST00000556288 RAB5CP51148 216 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 ZNF80P51504 273 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-238ENST00000556288 LINC01547P58512 204 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-238ENST00000556288 PRR27Q6MZM9 219 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 TMEM75Q8N9X5 138 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 RNASE8Q8TDE3 154 aaKnown RBP3.27□□□□□ -1.89
ATXN3-238ENST00000556288 HIST1H2BAQ96A08 127 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 KCNS1Q96KK3 526 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 FAM19A4Q96LR4 140 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 LENEPQ9Y5L5 61 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 ARL2-SNX15V9GYD0 113 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 DNAH9Q9NYC9 4486 aa3.27□□□□□ -1.89
ATXN3-238ENST00000556288 IGLV2-18A0A075B6J9 118 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 TRAV26-1A0A087WT03 109 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 A0A096LPF7 62 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 IGHV3-73A0A0B4J1V6 119 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 IGHV3-16A0A0C4DH30 117 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 PLAC8L1A1L4L8 177 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 FBLL1A6NHQ2 334 aaKnown RBP3.26□□□□□ -1.89
ATXN3-238ENST00000556288 B4DEV8 164 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 SCO1O75880 301 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 TYMSP04818 313 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 SFTA3P0C7M3 94 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 P0DMU3 169 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 FAM231AP0DMU4 169 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 FAM231CP0DMU5 169 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 SULT1A2P50226 295 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 TCTAP57738 103 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 ZNF674Q2M3X9 581 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 RNF212Q495C1 297 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 Q6AWC8 147 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 BAGE2Q86Y30 109 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 ARL6IP6Q8N6S5 226 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 OR4C5Q8NGB2 326 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 LYPD6BQ8NI32 183 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 FMC1Q96HJ9 113 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 SPXQ9BT56 116 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 EIF5A2Q9GZV4 153 aaKnown RBP3.26□□□□□ -1.89
ATXN3-238ENST00000556288 BIN3Q9NQY0 253 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 ZFP30Q9Y2G7 519 aa3.26□□□□□ -1.89
ATXN3-238ENST00000556288 MUC21A0A0G2JKD1 596 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 TRBV7-9A0A0J9YWB2 115 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 MUC21A0A140T8X8 626 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 F8W036 122 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 M0R2P5 195 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 SPINK4O60575 86 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 SH2D1AO60880 128 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 S100A8P05109 93 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 S100A9P06702 114 aaKnown RBP3.25□□□□□ -1.89
ATXN3-238ENST00000556288 PFN1P07737 140 aaKnown RBP3.25□□□□□ -1.89
ATXN3-238ENST00000556288 ASIPP42127 132 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 CCL18P55774 89 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 TCL1AP56279 114 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 SNRPEP62304 92 aaKnown RBP3.25□□□□□ -1.89
ATXN3-238ENST00000556288 GAGE2BQ13066 116 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 DAZ2Q13117 558 aaKnown RBP3.25□□□□□ -1.89
ATXN3-238ENST00000556288 PEA15Q15121 130 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 ZNF876PQ49A33 203 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 GAGE2EQ4V326 116 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 FAM162BQ5T6X4 162 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 LGALS9CQ6DKI2 356 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 GAGE2AQ6NT46 116 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 C15orf54Q8N8G6 183 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-238ENST00000556288 C11orf72Q8NBR9 251 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 PCNPQ8WW12 178 aaKnown RBP3.25□□□□□ -1.89
ATXN3-238ENST00000556288 ZC2HC1AQ96GY0 325 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 MANBALQ9NQG1 85 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 GAGE2DQ9UEU5 116 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 HHLA3Q9XRX5 114 aa3.25□□□□□ -1.89
ATXN3-238ENST00000556288 HUWE1Q7Z6Z7 4374 aaKnown RBP3.24□□□□□ -1.89
ATXN3-238ENST00000556288 RBFOX3A6NFN3 312 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 H3BVH4 76 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 NDUFS6O75380 124 aaKnown RBP3.24□□□□□ -1.89
ATXN3-238ENST00000556288 MT-ND4LP03901 98 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 ARMS2P0C7Q2 107 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 RPL35P42766 123 aaKnown RBP3.24□□□□□ -1.89
ATXN3-238ENST00000556288 GNG4P50150 75 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 RAB5BP61020 215 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 CTAG1AP78358 180 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 LGALS9BQ3B8N2 356 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 IBA57Q5T440 356 aaKnown RBP3.24□□□□□ -1.89
ATXN3-238ENST00000556288 Q86TA4 180 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 POM121L12Q8N7R1 296 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 STPG4Q8N801 248 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 C15orf53Q8NAA6 179 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 FAM210BQ96KR6 192 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 LINC00467Q9BRT7 94 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 TPPP3Q9BW30 176 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 VAX2Q9UIW0 290 aa3.24□□□□□ -1.89
ATXN3-238ENST00000556288 PHLDA3Q9Y5J5 127 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 306.3 ms