RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-208	ENST00000556237	HIST1H2BK	O60814	126 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	HIST1H2BJ	P06899	126 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	GIG44	P09565	113 aa	Predicted RBP	4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	HIST1H2BO	P23527	126 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	HIST1H2BB	P33778	126 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	HIST1H2BD	P58876	126 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	HIST1H2BC	P62807	126 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	SLA	Q13239	276 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	HIST2H2BE	Q16778	126 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	ZNF493	Q6ZR52	646 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	TMEM256	Q8N2U0	113 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	GATD1	Q8NB37	220 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	HIST1H2BH	Q93079	126 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	HIST1H2BN	Q99877	126 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	HIST1H2BM	Q99879	126 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	LINC00467	Q9BRT7	94 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	CNFN	Q9BYD5	112 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	TMEM191A	Q9H0A3	160 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	SCRT2	Q9NQ03	307 aa		4.6	□□□□□ -1.67
HIF1A-208	ENST00000556237	NF1	P21359	2839 aa		4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	NHLRC4	P0CG21	123 aa	Predicted RBP	4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	AZU1	P20160	251 aa		4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	RAB4A	P20338	218 aa		4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	EVI2A	P22794	236 aa		4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	SNRPE	P62304	92 aa	Known RBP	4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	FAM104B	Q5XKR9	115 aa		4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	AMN1	Q8IY45	258 aa		4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	C9orf85	Q96MD7	179 aa		4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	RCHY1	Q96PM5	261 aa		4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	GSN-AS1	Q9NRJ2	163 aa		4.59	□□□□□ -1.67
HIF1A-208	ENST00000556237	TEP1	Q99973	2627 aa	Known RBP	4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237		G3V4G9	280 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	SMIM17	P0DL12	118 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	SRI	P30626	198 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	CKS2	P33552	79 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	APOC4	P55056	127 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	TIRAP	P58753	221 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	ZNF415	Q09FC8	603 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	EGFEM1P	Q0D2K5	195 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237		Q0VG73	95 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	MRPL51	Q4U2R6	128 aa	Known RBP	4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	BAGE3	Q86Y29	109 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	C14orf178	Q8N769	122 aa	Predicted RBP	4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	CSNK1G2-AS1	Q8NCQ2	148 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	RNF185	Q96GF1	192 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	ALKBH7	Q9BT30	221 aa	Predicted RBP	4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	SPX	Q9BT56	116 aa		4.58	□□□□□ -1.68
HIF1A-208	ENST00000556237	KIR2DL5B	A0A0G2JN68	375 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	KIR2DL5B	A0A0G2JPC4	375 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	LOC105371267	A0A1B0GV96	52 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	C5orf52	A6NGY3	159 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	SMKR1	H3BMG3	65 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237		M0R2P5	195 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	UBE2C	O00762	179 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	IGHV4-30-4	P0DP06	118 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	RRN3P1	Q2M238	152 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	ZNF876P	Q49A33	203 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	KIR2DL5A	Q8N109	375 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	KIR2DL5B	Q8NHK3	375 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	DPH3P1	Q9H4G8	78 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	JPT2	Q9H910	190 aa		4.57	□□□□□ -1.68
HIF1A-208	ENST00000556237	NOTCH3	Q9UM47	2321 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	LOC389332	A0A1B0GUA5	103 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237		D6R8Y8	96 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	NXPH4	O95158	308 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	PPBP	P02775	128 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	MGP	P08493	103 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	GATA1	P15976	413 aa	Predicted RBP	4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	IQCJ	Q1A5X6	159 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	OR10J3	Q5JRS4	329 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	ZNF705A	Q6ZN79	300 aa	Predicted RBP	4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	NIT1	Q86X76	327 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	ORMDL3	Q8N138	153 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	C11orf72	Q8NBR9	251 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	C18orf32	Q8TCD1	76 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	PTH2	Q96A98	100 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	PRELID3A	Q96N28	172 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	AP1S3	Q96PC3	154 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	SAMD10	Q9BYL1	202 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	MRPL16	Q9NX20	251 aa	Known RBP	4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	KIF25-AS1	Q9Y6Z4	181 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237		U3KQK5	164 aa		4.56	□□□□□ -1.68
HIF1A-208	ENST00000556237	MUC4	Q99102	2169 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	TRGV1	A0A0A0MS02	117 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	SMIM9	A6NGZ8	99 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237		A8MWV9	139 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	NUPR1	O60356	82 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	GAS8-AS1	O95177	125 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	NCR2	O95944	276 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	CRYGD	P07320	174 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	S100A2	P29034	98 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	LINC00315	P59091	139 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	PDZD11	Q5EBL8	140 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	COA6	Q5JTJ3	125 aa	Known RBP	4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	FAM74A4	Q5TZK3	123 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	PRSS3P2	Q8NHM4	247 aa		4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	RNASE8	Q8TDE3	154 aa	Known RBP	4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	TMEM263	Q8WUH6	116 aa	Known RBP	4.55	□□□□□ -1.68
HIF1A-208	ENST00000556237	MRAP2	Q96G30	205 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms