RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CFAP126Q5VTH2 177 aa5.39□□□□□ -1.55
TDP1-214ENST00000556063 C15orf53Q8NAA6 179 aa5.39□□□□□ -1.55
TDP1-214ENST00000556063 ZNF479Q96JC4 524 aa5.39□□□□□ -1.55
TDP1-214ENST00000556063 PGLYRP4Q96LB8 373 aa5.39□□□□□ -1.55
TDP1-214ENST00000556063 CNFNQ9BYD5 112 aa5.39□□□□□ -1.55
TDP1-214ENST00000556063 CTDSP1Q9GZU7 261 aa5.39□□□□□ -1.55
TDP1-214ENST00000556063 PRO0255Q9UI72 69 aa5.39□□□□□ -1.55
TDP1-214ENST00000556063 HHLA3Q9XRX5 114 aa5.39□□□□□ -1.55
TDP1-214ENST00000556063 MUC21A0A0G2JKD1 596 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 MUC21A0A140T8X8 626 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 SMIM27A0A1W2PRY6 76 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 PAX4O43316 350 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 SNAPINO95295 136 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 APOC3P02656 99 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 S100A8P05109 93 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 NTF3P20783 257 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 FHL2Q14192 279 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 RHEBQ15382 184 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 CASC10Q5T4H9 136 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 FAM74A4Q5TZK3 123 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 SVBPQ8N300 66 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 POM121L12Q8N7R1 296 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 GTSF1Q8WW33 167 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 PRADC1Q9BSG0 188 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 COL7A1Q02388 2944 aa5.38□□□□□ -1.55
TDP1-214ENST00000556063 TRAV26-1A0A087WT03 109 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 A0A087WWL8 130 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 A0A1B0GW15 77 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 TRBV6-4A0A1B0GX49 114 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 F5H697 171 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 GATA1P15976 413 aaPredicted RBP5.37□□□□□ -1.55
TDP1-214ENST00000556063 HOXA5P20719 270 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 S100PP25815 95 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 CRYBA4P53673 196 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 RHOHQ15669 191 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 ZNF56Q15929 161 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 TMEM88Q6PEY1 159 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 KCNIP4Q6PIL6 250 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 SLC7A5P1Q8MH63 180 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 C14orf178Q8N769 122 aaPredicted RBP5.37□□□□□ -1.55
TDP1-214ENST00000556063 CLRN3Q8NCR9 226 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 NUP35Q8NFH5 326 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 IMMP2LQ96T52 175 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 DPH3P1Q9H4G8 78 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 JPT2Q9H910 190 aa5.37□□□□□ -1.55
TDP1-214ENST00000556063 TMA7Q9Y2S6 64 aaKnown RBP5.37□□□□□ -1.55
TDP1-214ENST00000556063 A0A087WWC5 75 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 IGHV3-73A0A0B4J1V6 119 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 A0A0J9YY99 117 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 C7orf77A4D0Y5 90 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 H7C1H1 209 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 NUDT3O95989 172 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 CRYGDP07320 174 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 RAB4BP61018 213 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 MRPL23Q16540 153 aaKnown RBP5.36□□□□□ -1.55
TDP1-214ENST00000556063 SH2D6Q7Z4S9 175 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 SAMD10Q9BYL1 202 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 RPS10P5Q9NQ39 176 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 TMEM242Q9NWH2 141 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 ICOSQ9Y6W8 199 aa5.36□□□□□ -1.55
TDP1-214ENST00000556063 TRBV10-1A0A0K0K1A3 114 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 K7EQD1 137 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 MGPP08493 103 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 GYPEP15421 78 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 EVI2AP22794 236 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 SRIP30626 198 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 UFSP1Q6NVU6 142 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 ATP5L2Q7Z4Y8 100 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.35□□□□□ -1.55
TDP1-214ENST00000556063 VSIG2Q96IQ7 327 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 BTF3L4Q96K17 158 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 TMEM191AQ9H0A3 160 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 MSRB1Q9NZV6 116 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 APLNQ9ULZ1 77 aa5.35□□□□□ -1.55
TDP1-214ENST00000556063 TRAV9-1A0A075B6T8 112 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 P0DMU3 169 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 FAM231AP0DMU4 169 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 FAM231CP0DMU5 169 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 CAMPP49913 170 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 CCL18P55774 89 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 FAM3BP58499 235 aaPredicted RBP5.34□□□□□ -1.55
TDP1-214ENST00000556063 HBBP68871 147 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 RPL36AP83881 106 aaKnown RBP5.34□□□□□ -1.55
TDP1-214ENST00000556063 NEGR1Q7Z3B1 354 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 SLC25A29Q8N8R3 303 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 FRZBQ92765 325 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 RPL36ALQ969Q0 106 aaKnown RBP5.34□□□□□ -1.55
TDP1-214ENST00000556063 KIF25-AS1Q9Y6Z4 181 aa5.34□□□□□ -1.55
TDP1-214ENST00000556063 J3QL48 77 aa5.33□□□□□ -1.56
TDP1-214ENST00000556063 MRPL54Q6P161 138 aaKnown RBP5.33□□□□□ -1.56
TDP1-214ENST00000556063 RASL11AQ6T310 242 aa5.33□□□□□ -1.56
TDP1-214ENST00000556063 Q6ZSN1 163 aa5.33□□□□□ -1.56
TDP1-214ENST00000556063 UBE2DNLQ8IWF7 75 aa5.33□□□□□ -1.56
TDP1-214ENST00000556063 DNAJC30Q96LL9 226 aa5.33□□□□□ -1.56
TDP1-214ENST00000556063 DNAH9Q9NYC9 4486 aa5.33□□□□□ -1.56
TDP1-214ENST00000556063 TRBV7-3A0A075B6L6 115 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 A0A096LPF7 62 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 GAGE12JA6NER3 117 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 PPP1R17O96001 155 aa5.32□□□□□ -1.56
TDP1-214ENST00000556063 LINC00315P59091 139 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms