RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 DNLZQ5SXM8 178 aa11.1□□□□□ -0.63
XRCC3-215ENST00000555964 C1orf43Q9BWL3 253 aa11.1□□□□□ -0.63
XRCC3-215ENST00000555964 PHLDA3Q9Y5J5 127 aa11.1□□□□□ -0.63
XRCC3-215ENST00000555964 RPL36AP83881 106 aaKnown RBP11.09□□□□□ -0.63
XRCC3-215ENST00000555964 IFITM3Q01628 133 aa11.09□□□□□ -0.63
XRCC3-215ENST00000555964 ATRAIDQ6UW56 229 aa11.09□□□□□ -0.63
XRCC3-215ENST00000555964 Q86TA4 180 aa11.09□□□□□ -0.63
XRCC3-215ENST00000555964 CIRBP-AS1Q8TBR5 109 aa11.09□□□□□ -0.63
XRCC3-215ENST00000555964 RPL36ALQ969Q0 106 aaKnown RBP11.09□□□□□ -0.63
XRCC3-215ENST00000555964 HIST1H2BAQ96A08 127 aa11.09□□□□□ -0.63
XRCC3-215ENST00000555964 AQP10Q96PS8 301 aa11.09□□□□□ -0.63
XRCC3-215ENST00000555964 JPT2Q9H910 190 aa11.09□□□□□ -0.63
XRCC3-215ENST00000555964 TRAV34A0A0B4J273 112 aa11.08□□□□□ -0.64
XRCC3-215ENST00000555964 PEX7O00628 323 aa11.08□□□□□ -0.64
XRCC3-215ENST00000555964 CRPP02741 224 aa11.08□□□□□ -0.64
XRCC3-215ENST00000555964 ARMS2P0C7Q2 107 aa11.08□□□□□ -0.64
XRCC3-215ENST00000555964 TPT1P13693 172 aaKnown RBP11.08□□□□□ -0.64
XRCC3-215ENST00000555964 PKIAP61925 76 aa11.08□□□□□ -0.64
XRCC3-215ENST00000555964 FAM162BQ5T6X4 162 aa11.08□□□□□ -0.64
XRCC3-215ENST00000555964 ZFP82Q8N141 532 aa11.07□□□□□ -0.64
XRCC3-215ENST00000555964 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.07□□□□□ -0.64
XRCC3-215ENST00000555964 SFRP2Q96HF1 295 aa11.07□□□□□ -0.64
XRCC3-215ENST00000555964 Q9UF83 564 aa11.07□□□□□ -0.64
XRCC3-215ENST00000555964 ZFP30Q9Y2G7 519 aa11.07□□□□□ -0.64
XRCC3-215ENST00000555964 TRBV7-3A0A075B6L6 115 aa11.06□□□□□ -0.64
XRCC3-215ENST00000555964 CTXND1A0A1B0GTU2 59 aa11.06□□□□□ -0.64
XRCC3-215ENST00000555964 KRBOX1C9JBD0 128 aa11.06□□□□□ -0.64
XRCC3-215ENST00000555964 M0R036 132 aa11.06□□□□□ -0.64
XRCC3-215ENST00000555964 PLA2G2DQ9UNK4 145 aa11.06□□□□□ -0.64
XRCC3-215ENST00000555964 A0A087WWL8 130 aa11.05□□□□□ -0.64
XRCC3-215ENST00000555964 BORCS7-ASMTA0A0B4J1R7 106 aa11.05□□□□□ -0.64
XRCC3-215ENST00000555964 TMEM262E9PQX1 116 aa11.05□□□□□ -0.64
XRCC3-215ENST00000555964 M0R381 172 aa11.05□□□□□ -0.64
XRCC3-215ENST00000555964 KRTAP10-4P60372 401 aaPredicted RBP11.05□□□□□ -0.64
XRCC3-215ENST00000555964 SH2D1AO60880 128 aa11.04□□□□□ -0.64
XRCC3-215ENST00000555964 UBE2G2P60604 165 aa11.04□□□□□ -0.64
XRCC3-215ENST00000555964 UBE2D3P61077 147 aa11.04□□□□□ -0.64
XRCC3-215ENST00000555964 RPL37AP61513 92 aaKnown RBP11.04□□□□□ -0.64
XRCC3-215ENST00000555964 UBE2G1P62253 170 aa11.04□□□□□ -0.64
XRCC3-215ENST00000555964 UBE2D2P62837 147 aa11.04□□□□□ -0.64
XRCC3-215ENST00000555964 COX8CQ7Z4L0 72 aa11.04□□□□□ -0.64
XRCC3-215ENST00000555964 INO80EQ8NBZ0 244 aaPredicted RBP11.04□□□□□ -0.64
XRCC3-215ENST00000555964 ZC2HC1AQ96GY0 325 aa11.04□□□□□ -0.64
XRCC3-215ENST00000555964 FMC1Q96HJ9 113 aa11.04□□□□□ -0.64
XRCC3-215ENST00000555964 TCEAL7Q9BRU2 100 aa11.04□□□□□ -0.64
XRCC3-215ENST00000555964 LINC01559Q495D7 138 aa11.03□□□□□ -0.64
XRCC3-215ENST00000555964 OR10G8Q8NGN5 311 aa11.03□□□□□ -0.64
XRCC3-215ENST00000555964 DNAJC30Q96LL9 226 aa11.03□□□□□ -0.64
XRCC3-215ENST00000555964 TRBV6-8A0A0A6YYG3 113 aa11.02□□□□□ -0.65
XRCC3-215ENST00000555964 GRIFINA4D1Z8 144 aa11.02□□□□□ -0.65
XRCC3-215ENST00000555964 FAM74A7A6NL05 159 aa11.02□□□□□ -0.65
XRCC3-215ENST00000555964 ALG5Q9Y673 324 aa11.02□□□□□ -0.65
XRCC3-215ENST00000555964 CRIP1P50238 77 aa11.01□□□□□ -0.65
XRCC3-215ENST00000555964 RAB4BP61018 213 aa11.01□□□□□ -0.65
XRCC3-215ENST00000555964 MIAQ16674 131 aa11.01□□□□□ -0.65
XRCC3-215ENST00000555964 ZNF674Q2M3X9 581 aa11.01□□□□□ -0.65
XRCC3-215ENST00000555964 TMEM97Q5BJF2 176 aa11.01□□□□□ -0.65
XRCC3-215ENST00000555964 AKR1C8PQ5T2L2 129 aa11.01□□□□□ -0.65
XRCC3-215ENST00000555964 C15orf54Q8N8G6 183 aa11.01□□□□□ -0.65
XRCC3-215ENST00000555964 MED28Q9H204 178 aa11.01□□□□□ -0.65
XRCC3-215ENST00000555964 LRP1Q07954 4544 aaKnown RBP11.01□□□□□ -0.65
XRCC3-215ENST00000555964 HLA-DQA1P01909 254 aa11□□□□□ -0.65
XRCC3-215ENST00000555964 ANGP03950 147 aaKnown RBP11□□□□□ -0.65
XRCC3-215ENST00000555964 DGAT2L7PQ6IED9 249 aa11□□□□□ -0.65
XRCC3-215ENST00000555964 TMSB15BA0A087X1C1 80 aa10.99□□□□□ -0.65
XRCC3-215ENST00000555964 TRBV6-1A0A0K0K1D8 114 aa10.99□□□□□ -0.65
XRCC3-215ENST00000555964 A6NHS1 94 aa10.99□□□□□ -0.65
XRCC3-215ENST00000555964 USP17L23D6RBM5 183 aa10.99□□□□□ -0.65
XRCC3-215ENST00000555964 ZNF56Q15929 161 aa10.99□□□□□ -0.65
XRCC3-215ENST00000555964 RPL7L1Q6DKI1 246 aaKnown RBP10.99□□□□□ -0.65
XRCC3-215ENST00000555964 PTTG1O95997 202 aa10.98□□□□□ -0.65
XRCC3-215ENST00000555964 LTAP01374 205 aa10.98□□□□□ -0.65
XRCC3-215ENST00000555964 FHITP49789 147 aa10.98□□□□□ -0.65
XRCC3-215ENST00000555964 ZNF726P1Q15940 193 aa10.98□□□□□ -0.65
XRCC3-215ENST00000555964 MPV17L2Q567V2 206 aa10.98□□□□□ -0.65
XRCC3-215ENST00000555964 ENHOQ6UWT2 76 aa10.98□□□□□ -0.65
XRCC3-215ENST00000555964 STOML3Q8TAV4 291 aa10.98□□□□□ -0.65
XRCC3-215ENST00000555964 CHCHD5Q9BSY4 110 aa10.98□□□□□ -0.65
XRCC3-215ENST00000555964 GIPP09681 153 aaPredicted RBP10.97□□□□□ -0.65
XRCC3-215ENST00000555964 AKR1C3P42330 323 aa10.97□□□□□ -0.65
XRCC3-215ENST00000555964 MAP1LC3B2A6NCE7 125 aa10.96□□□□□ -0.65
XRCC3-215ENST00000555964 CXCL1P09341 107 aa10.96□□□□□ -0.65
XRCC3-215ENST00000555964 RPL19P84098 196 aaKnown RBP10.96□□□□□ -0.65
XRCC3-215ENST00000555964 CST9LP1Q5W188 147 aa10.96□□□□□ -0.65
XRCC3-215ENST00000555964 NEXN-AS1Q8NBZ9 246 aa10.96□□□□□ -0.65
XRCC3-215ENST00000555964 ZNF471Q9BX82 626 aaPredicted RBP10.96□□□□□ -0.65
XRCC3-215ENST00000555964 MAP1LC3BQ9GZQ8 125 aa10.96□□□□□ -0.65
XRCC3-215ENST00000555964 FXYD6-FXYD2A0A087WZ82 144 aa10.95□□□□□ -0.66
XRCC3-215ENST00000555964 S100A9P06702 114 aaKnown RBP10.95□□□□□ -0.66
XRCC3-215ENST00000555964 PRR27Q6MZM9 219 aa10.95□□□□□ -0.66
XRCC3-215ENST00000555964 C9orf163Q8N9P6 203 aa10.95□□□□□ -0.66
XRCC3-215ENST00000555964 FAT3Q8TDW7 4589 aa10.95□□□□□ -0.66
XRCC3-215ENST00000555964 CLRN3Q8NCR9 226 aa10.94□□□□□ -0.66
XRCC3-215ENST00000555964 TRBV25-1A0A075B6N4 114 aa10.93□□□□□ -0.66
XRCC3-215ENST00000555964 A0A0D9SG52 128 aa10.93□□□□□ -0.66
XRCC3-215ENST00000555964 F5H697 171 aa10.93□□□□□ -0.66
XRCC3-215ENST00000555964 PRSS1P07477 247 aa10.93□□□□□ -0.66
XRCC3-215ENST00000555964 SMIM17P0DL12 118 aa10.93□□□□□ -0.66
XRCC3-215ENST00000555964 SPANXN1Q5VSR9 72 aa10.93□□□□□ -0.66
XRCC3-215ENST00000555964 PRR34Q9NV39 138 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms