RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 LINC00526Q96FQ7 95 aa1.42□□□□□ -2.18
KTN1-223ENST00000555573 TMEM141Q96I45 108 aa1.42□□□□□ -2.18
KTN1-223ENST00000555573 C14orf144Q96I85 54 aa1.42□□□□□ -2.18
KTN1-223ENST00000555573 MRPL57Q9BQC6 102 aaKnown RBP1.42□□□□□ -2.18
KTN1-223ENST00000555573 RREB1Q92766 1687 aa1.42□□□□□ -2.18
KTN1-223ENST00000555573 DLEC1Q9Y238 1755 aa1.42□□□□□ -2.18
KTN1-223ENST00000555573 CITO14578 2027 aa1.41□□□□□ -2.18
KTN1-223ENST00000555573 RBBP6Q7Z6E9 1792 aaKnown RBP1.41□□□□□ -2.18
KTN1-223ENST00000555573 PZPP20742 1482 aa1.41□□□□□ -2.18
KTN1-223ENST00000555573 TCRBV3S1A0A5B6 114 aa1.41□□□□□ -2.18
KTN1-223ENST00000555573 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
KTN1-223ENST00000555573 TET1Q8NFU7 2136 aa1.41□□□□□ -2.18
KTN1-223ENST00000555573 NRKQ7Z2Y5 1582 aa1.41□□□□□ -2.18
KTN1-223ENST00000555573 A6NIN4 97 aa1.4□□□□□ -2.18
KTN1-223ENST00000555573 APOC4-APOC2K7ER74 178 aa1.4□□□□□ -2.18
KTN1-223ENST00000555573 APOC2P02655 101 aa1.4□□□□□ -2.18
KTN1-223ENST00000555573 CATR1Q13166 79 aa1.4□□□□□ -2.18
KTN1-223ENST00000555573 Q6ZS92 163 aa1.4□□□□□ -2.18
KTN1-223ENST00000555573 MRPL35Q9NZE8 188 aaKnown RBP1.4□□□□□ -2.18
KTN1-223ENST00000555573 RP1L1Q8IWN7 2480 aaPredicted RBP1.4□□□□□ -2.19
KTN1-223ENST00000555573 MRC2Q9UBG0 1479 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 NWD2Q9ULI1 1742 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 HIGD1CA8MV81 97 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 TNFP01375 233 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 CCKP06307 115 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 SMIM6P0DI80 62 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 UBE2G1P62253 170 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 C9orf153Q5TBE3 101 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 C12orf73Q69YU5 71 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 SBSPONQ8IVN8 264 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 TSKUQ8WUA8 353 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 IFI27L1Q96BM0 104 aa1.4□□□□□ -2.19
KTN1-223ENST00000555573 DLG5Q8TDM6 1919 aa1.39□□□□□ -2.19
KTN1-223ENST00000555573 RBP2P50120 134 aa1.39□□□□□ -2.19
KTN1-223ENST00000555573 C9orf116Q5BN46 136 aaPredicted RBP1.39□□□□□ -2.19
KTN1-223ENST00000555573 GTF2H5Q6ZYL4 71 aa1.39□□□□□ -2.19
KTN1-223ENST00000555573 RPRMQ9NS64 109 aa1.39□□□□□ -2.19
KTN1-223ENST00000555573 AFDNP55196 1824 aaKnown RBP1.39□□□□□ -2.19
KTN1-223ENST00000555573 SMARCA2P51531 1590 aa1.39□□□□□ -2.19
KTN1-223ENST00000555573 TRAV12-3A0A0B4J271 114 aa1.38□□□□□ -2.19
KTN1-223ENST00000555573 CBLN1P23435 193 aa1.38□□□□□ -2.19
KTN1-223ENST00000555573 FXYD4P59646 89 aa1.38□□□□□ -2.19
KTN1-223ENST00000555573 KRTAP10-4P60372 401 aaPredicted RBP1.38□□□□□ -2.19
KTN1-223ENST00000555573 NPC2P61916 151 aa1.38□□□□□ -2.19
KTN1-223ENST00000555573 CACNA1BQ00975 2339 aa1.38□□□□□ -2.19
KTN1-223ENST00000555573 NDUFA11Q86Y39 141 aa1.38□□□□□ -2.19
KTN1-223ENST00000555573 SPTSSBQ8NFR3 76 aa1.38□□□□□ -2.19
KTN1-223ENST00000555573 PPP3R2Q96LZ3 170 aa1.38□□□□□ -2.19
KTN1-223ENST00000555573 ROBO1Q9Y6N7 1651 aa1.38□□□□□ -2.19
KTN1-223ENST00000555573 LOC101927531A0A1B0GV80 90 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 ARL14EPLP0DKL9 152 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 INSL4Q14641 139 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 CYP2G1PQ6ZSU1 146 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 C10orf82Q8WW14 230 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 IER3IP1Q9Y5U9 82 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 PRRC2BQ5JSZ5 2229 aaKnown RBP1.37□□□□□ -2.19
KTN1-223ENST00000555573 PARP14Q460N5 1801 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 PIGBOS1A0A0B4J2F0 54 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 OOSP1A8MZH6 123 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 IFNA17P01571 189 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 RBM3P98179 157 aaKnown RBP1.37□□□□□ -2.19
KTN1-223ENST00000555573 SVBPQ8N300 66 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 Q8N8P6 123 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 SNRNP200O75643 2136 aaKnown RBP1.37□□□□□ -2.19
KTN1-223ENST00000555573 MAPKBP1O60336 1514 aa1.37□□□□□ -2.19
KTN1-223ENST00000555573 MED13Q9UHV7 2174 aa1.36□□□□□ -2.19
KTN1-223ENST00000555573 HELZ2Q9BYK8 2649 aaKnown RBP1.36□□□□□ -2.19
KTN1-223ENST00000555573 NRXN2Q9P2S2 1712 aa1.36□□□□□ -2.19
KTN1-223ENST00000555573 TRBV10-3A0A0K0K1G6 114 aa1.36□□□□□ -2.19
KTN1-223ENST00000555573 FXYD3Q14802 87 aa1.36□□□□□ -2.19
KTN1-223ENST00000555573 DSCR8Q96T75 97 aa1.36□□□□□ -2.19
KTN1-223ENST00000555573 SPANXDQ9BXN6 97 aa1.36□□□□□ -2.19
KTN1-223ENST00000555573 ZFYVE16Q7Z3T8 1539 aa1.36□□□□□ -2.19
KTN1-223ENST00000555573 PATJQ8NI35 1801 aa1.36□□□□□ -2.19
KTN1-223ENST00000555573 MYH8P13535 1937 aa1.36□□□□□ -2.19
KTN1-223ENST00000555573 ARAP2Q8WZ64 1704 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 NBDYA0A0U1RRE5 68 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 NCR3O14931 201 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 XAF1Q6GPH4 301 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 Q6ZQY7 126 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 Q86TA4 180 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 AMELYQ99218 206 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 COA4Q9NYJ1 87 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 PLXNA1Q9UIW2 1896 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 SPAG17Q6Q759 2223 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 CCNB3Q8WWL7 1395 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 CNTLNQ9NXG0 1405 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 IFT140Q96RY7 1462 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 CC2D2AQ9P2K1 1620 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 TEX49A0A1B0GTD5 131 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 DEFB132Q7Z7B7 95 aa1.35□□□□□ -2.19
KTN1-223ENST00000555573 C8orf59Q8N0T1 100 aaPredicted RBP1.35□□□□□ -2.19
KTN1-223ENST00000555573 KIAA0100Q14667 2235 aaKnown RBP1.34□□□□□ -2.19
KTN1-223ENST00000555573 PHIPQ8WWQ0 1821 aa1.34□□□□□ -2.19
KTN1-223ENST00000555573 BLMP54132 1417 aaPredicted RBP1.34□□□□□ -2.19
KTN1-223ENST00000555573 KDM6BO15054 1643 aa1.34□□□□□ -2.19
KTN1-223ENST00000555573 ESPL1Q14674 2120 aa1.34□□□□□ -2.2
KTN1-223ENST00000555573 TMEM218A2RU14 115 aa1.34□□□□□ -2.2
KTN1-223ENST00000555573 FXYD1O00168 92 aa1.34□□□□□ -2.2
KTN1-223ENST00000555573 IFITM1P13164 125 aa1.34□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms