RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 TWIST1Q15672 202 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 MRPL51Q4U2R6 128 aaKnown RBP7.24□□□□□ -1.25
PSEN1-213ENST00000555386 ANKRD39Q53RE8 183 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 ZNF575Q86XF7 245 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 FAM110AQ9BQ89 295 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 MRPS16Q9Y3D3 137 aaKnown RBP7.24□□□□□ -1.25
PSEN1-213ENST00000555386 A8MZ25 164 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 HNRNPA3P51991 378 aaKnown RBP7.24□□□□□ -1.25
PSEN1-213ENST00000555386 AMN1Q8IY45 258 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 LINC00477Q96M19 166 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 ZMAT4Q9H898 229 aa7.24□□□□□ -1.25
PSEN1-213ENST00000555386 TRBV7-9A0A0J9YWB2 115 aa7.23□□□□□ -1.25
PSEN1-213ENST00000555386 LINC01546A6NGU7 62 aa7.23□□□□□ -1.25
PSEN1-213ENST00000555386 HSBP1L1C9JCN9 74 aa7.23□□□□□ -1.25
PSEN1-213ENST00000555386 CKS2P33552 79 aa7.23□□□□□ -1.25
PSEN1-213ENST00000555386 APOC4P55056 127 aa7.23□□□□□ -1.25
PSEN1-213ENST00000555386 DEFB135Q30KP9 77 aa7.23□□□□□ -1.25
PSEN1-213ENST00000555386 LINC01545Q5VT33 79 aa7.23□□□□□ -1.25
PSEN1-213ENST00000555386 SAMD13Q5VXD3 122 aa7.23□□□□□ -1.25
PSEN1-213ENST00000555386 Q6ZN92 141 aa7.23□□□□□ -1.25
PSEN1-213ENST00000555386 IGHV4-4A0A075B6R2 117 aa7.22□□□□□ -1.25
PSEN1-213ENST00000555386 TSPOP30536 169 aa7.22□□□□□ -1.25
PSEN1-213ENST00000555386 IFI27P40305 119 aaPredicted RBP7.22□□□□□ -1.25
PSEN1-213ENST00000555386 CACNG7P62955 275 aa7.22□□□□□ -1.25
PSEN1-213ENST00000555386 COL5A1-AS1Q5SY13 56 aa7.22□□□□□ -1.25
PSEN1-213ENST00000555386 TRPT1Q86TN4 253 aaKnown RBP7.22□□□□□ -1.25
PSEN1-213ENST00000555386 ATOH7Q8N100 152 aa7.22□□□□□ -1.25
PSEN1-213ENST00000555386 CLUHP3Q96NS8 147 aa7.22□□□□□ -1.25
PSEN1-213ENST00000555386 CSTL1Q9H114 145 aa7.22□□□□□ -1.25
PSEN1-213ENST00000555386 IGKV3D-20A0A0C4DH25 116 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 H3BMM0 161 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 TCAPO15273 167 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 SNAI2O43623 268 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 HBDP02042 147 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 HLA-DRB4P13762 266 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 FOXI2Q6ZQN5 318 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 LINC00173Q6ZV60 143 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 SMIM15Q7Z3B0 74 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 OR10J6PQ8NGY7 276 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 RNF185Q96GF1 192 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 SPATA25Q9BR10 227 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 XCL2Q9UBD3 114 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 HLA-DRB4X5D2U9 266 aa7.21□□□□□ -1.26
PSEN1-213ENST00000555386 A0A0J9YX75 114 aa7.2□□□□□ -1.26
PSEN1-213ENST00000555386 NHLRC4P0CG21 123 aaPredicted RBP7.2□□□□□ -1.26
PSEN1-213ENST00000555386 MAJINQ3KP22 176 aa7.2□□□□□ -1.26
PSEN1-213ENST00000555386 TM2D3Q9BRN9 247 aa7.2□□□□□ -1.26
PSEN1-213ENST00000555386 MAP1LC3AQ9H492 121 aa7.2□□□□□ -1.26
PSEN1-213ENST00000555386 NXT2Q9NPJ8 142 aaKnown RBP7.2□□□□□ -1.26
PSEN1-213ENST00000555386 A0A096LNJ9 63 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 PRSS47A8MTI9 375 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 J3KRW8 73 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 NPYP01303 97 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 MED14OSP0DP75 135 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 LGALS9BQ3B8N2 356 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 LGALS9CQ6DKI2 356 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 OR8A1Q8NGG7 326 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 KIR2DL5BQ8NHK3 375 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 C11orf21Q9P2W6 132 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 STAB2Q8WWQ8 2551 aa7.19□□□□□ -1.26
PSEN1-213ENST00000555386 IGHV3OR16-12A0A075B7B8 117 aa7.18□□□□□ -1.26
PSEN1-213ENST00000555386 TRAV21A0A0B4J279 112 aa7.18□□□□□ -1.26
PSEN1-213ENST00000555386 LOC389332A0A1B0GUA5 103 aa7.18□□□□□ -1.26
PSEN1-213ENST00000555386 SPRY2O43597 315 aa7.18□□□□□ -1.26
PSEN1-213ENST00000555386 DUSP14O95147 198 aaKnown RBP7.18□□□□□ -1.26
PSEN1-213ENST00000555386 FAM19A4Q96LR4 140 aa7.18□□□□□ -1.26
PSEN1-213ENST00000555386 PMCHL2Q9BQD1 86 aa7.18□□□□□ -1.26
PSEN1-213ENST00000555386 OVOL2Q9BRP0 275 aa7.18□□□□□ -1.26
PSEN1-213ENST00000555386 TRAV12-2A0A075B6T6 113 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 MUC21A0A0G2JKD1 596 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 MUC21A0A140T8X8 626 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 GIG44P09565 113 aaPredicted RBP7.17□□□□□ -1.26
PSEN1-213ENST00000555386 GAGE1Q13065 139 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 SPINK13Q1W4C9 94 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 MUC21Q5SSG8 566 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 MORN3Q6PF18 240 aaPredicted RBP7.17□□□□□ -1.26
PSEN1-213ENST00000555386 SLC25A34Q6PIV7 304 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 ZFAND2AQ8N6M9 145 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 SCRT2Q9NQ03 307 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 MSRB1Q9NZV6 116 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 DNAH7Q8WXX0 4024 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 DEFB4AO15263 64 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 FCER1GP30273 86 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 BATFQ16520 125 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 Q8N8P6 123 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 OR11H2Q8NH07 326 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 RNF183Q96D59 192 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 MRAP2Q96G30 205 aa7.17□□□□□ -1.26
PSEN1-213ENST00000555386 hDV102S1A0JD36 115 aa7.16□□□□□ -1.26
PSEN1-213ENST00000555386 SMKR1H3BMG3 65 aa7.16□□□□□ -1.26
PSEN1-213ENST00000555386 LCE2BO14633 110 aa7.16□□□□□ -1.26
PSEN1-213ENST00000555386 NCR2O95944 276 aa7.16□□□□□ -1.26
PSEN1-213ENST00000555386 SPANXN1Q5VSR9 72 aa7.16□□□□□ -1.26
PSEN1-213ENST00000555386 IFI27L1Q96BM0 104 aa7.16□□□□□ -1.26
PSEN1-213ENST00000555386 GOLT1BQ9Y3E0 138 aa7.16□□□□□ -1.26
PSEN1-213ENST00000555386 COX8AP10176 69 aa7.15□□□□□ -1.27
PSEN1-213ENST00000555386 ASIPP42127 132 aa7.15□□□□□ -1.27
PSEN1-213ENST00000555386 KIR3DS1Q14943 382 aa7.15□□□□□ -1.27
PSEN1-213ENST00000555386 PRR9Q5T870 116 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms