RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 IGKV3D-20A0A0C4DH25 116 aa6.51□□□□□ -1.37
LINC00641-201ENST00000555379 K7EN84 100 aa6.51□□□□□ -1.37
LINC00641-201ENST00000555379 EGR2P11161 476 aaPredicted RBP6.51□□□□□ -1.37
LINC00641-201ENST00000555379 PLA2G2AP14555 144 aa6.51□□□□□ -1.37
LINC00641-201ENST00000555379 UBE2BP63146 152 aa6.51□□□□□ -1.37
LINC00641-201ENST00000555379 IGHV4OR15-8A0A075B7B6 117 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 A0A087WW49 117 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 F8WDY8 70 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 MUC7Q8TAX7 377 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 TPSG1Q9NRR2 321 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 V9GYV3 84 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 EP300Q09472 2414 aaPredicted RBP6.5□□□□□ -1.37
LINC00641-201ENST00000555379 SDK2Q58EX2 2172 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 NDUFA1O15239 70 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 IGLV2-23P01705 113 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 BAALCQ8WXS3 180 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 IGHV3-64A0A075B6Q5 118 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 H0YGX0 51 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 COX7A2LO14548 114 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 IGLC6P0CF74 106 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 PSMG3-AS1Q96PY0 264 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 NOP10Q9NPE3 64 aaKnown RBP6.5□□□□□ -1.37
LINC00641-201ENST00000555379 NUP210LQ5VU65 1888 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 IGKV2D-24A0A075B6R9 120 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 TIMM17BO60830 172 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 CGB7P0DN87 165 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 TDRG1Q3Y452 100 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 ATP5EP2Q5VTU8 51 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 NDUFA12Q9UI09 145 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 TECTAO75443 2155 aa6.5□□□□□ -1.37
LINC00641-201ENST00000555379 TEX22C9J3V5 150 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 SLURP1P55000 103 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 NDUFS7O75251 213 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 PRB1P04280 392 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 PRB4P10163 310 aaPredicted RBP6.49□□□□□ -1.37
LINC00641-201ENST00000555379 RNF144BQ7Z419 303 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 C8orf49Q96NF6 230 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 BRI3O95415 125 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 PMAIP1Q13794 54 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 PIK3CD-AS1Q5SR53 167 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 SERP2Q8N6R1 65 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 PCNX2A6NKB5 2137 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 IGKV1-17P01599 117 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 UBE2AP49459 152 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 ZNF503Q96F45 646 aa6.49□□□□□ -1.37
LINC00641-201ENST00000555379 NCKAP5O14513 1909 aa6.48□□□□□ -1.37
LINC00641-201ENST00000555379 ZC2HC1AQ96GY0 325 aa6.48□□□□□ -1.37
LINC00641-201ENST00000555379 MLANAQ16655 118 aa6.48□□□□□ -1.37
LINC00641-201ENST00000555379 TIMM17AQ99595 171 aa6.48□□□□□ -1.37
LINC00641-201ENST00000555379 ZNF747Q9BV97 191 aa6.48□□□□□ -1.37
LINC00641-201ENST00000555379 TRBV7-3A0A075B6L6 115 aa6.48□□□□□ -1.37
LINC00641-201ENST00000555379 FUSP35637 526 aaKnown RBP eCLIP6.48□□□□□ -1.37
LINC00641-201ENST00000555379 MUC22E2RYF6 1773 aaPredicted RBP6.48□□□□□ -1.37
LINC00641-201ENST00000555379 A0A0J9YX75 114 aa6.48□□□□□ -1.37
LINC00641-201ENST00000555379 GYPEP15421 78 aa6.48□□□□□ -1.37
LINC00641-201ENST00000555379 MP68P56378 58 aa6.48□□□□□ -1.37
LINC00641-201ENST00000555379 TRAV12-1A0A0B4J245 112 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 NDUFS5O43920 106 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 ORMDL1Q9P0S3 153 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 COL4A3Q01955 1670 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 LRRK1Q38SD2 2015 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 IGKV3D-7A0A0C4DH55 119 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 ZFP36P26651 326 aaKnown RBP6.47□□□□□ -1.37
LINC00641-201ENST00000555379 ARID1AO14497 2285 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 ICE1Q9Y2F5 2266 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 F8W735 103 aaPredicted RBP6.47□□□□□ -1.37
LINC00641-201ENST00000555379 TIRAPP58753 221 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 DYNAPQ8N1N2 210 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 ZNF581Q9P0T4 197 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 DKK2Q9UBU2 259 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 TRAV10A0A0B4J240 114 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 ETDCA0A1B0GVM5 59 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 PDE6GP18545 87 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 CFHR4Q92496 578 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 CAMK2N2Q96S95 79 aa6.47□□□□□ -1.37
LINC00641-201ENST00000555379 CTRLP40313 264 aa6.46□□□□□ -1.37
LINC00641-201ENST00000555379 C11orf45Q8TAV5 145 aa6.46□□□□□ -1.37
LINC00641-201ENST00000555379 HHLA3Q9XRX5 114 aa6.46□□□□□ -1.37
LINC00641-201ENST00000555379 MRGPRG-AS1Q2M3A8 158 aa6.46□□□□□ -1.38
LINC00641-201ENST00000555379 FXYD2P54710 66 aa6.46□□□□□ -1.38
LINC00641-201ENST00000555379 BLCAPP62952 87 aa6.46□□□□□ -1.38
LINC00641-201ENST00000555379 IGFL4Q6B9Z1 124 aa6.46□□□□□ -1.38
LINC00641-201ENST00000555379 SUMO4Q6EEV6 95 aa6.46□□□□□ -1.38
LINC00641-201ENST00000555379 ZNF524Q96C55 264 aa6.46□□□□□ -1.38
LINC00641-201ENST00000555379 LINC00526Q96FQ7 95 aa6.46□□□□□ -1.38
LINC00641-201ENST00000555379 J3QQQ9 107 aa6.45□□□□□ -1.38
LINC00641-201ENST00000555379 DIAPH2-AS1Q14236 149 aa6.45□□□□□ -1.38
LINC00641-201ENST00000555379 MAP6D1Q9H9H5 199 aa6.45□□□□□ -1.38
LINC00641-201ENST00000555379 TRAV12-2A0A075B6T6 113 aa6.45□□□□□ -1.38
LINC00641-201ENST00000555379 IGKV1OR2-108A0A075B7D4 117 aa6.45□□□□□ -1.38
LINC00641-201ENST00000555379 E9PLD3 99 aa6.45□□□□□ -1.38
LINC00641-201ENST00000555379 C4orf48Q5BLP8 95 aa6.45□□□□□ -1.38
LINC00641-201ENST00000555379 PCP2Q8IVA1 136 aa6.45□□□□□ -1.38
LINC00641-201ENST00000555379 FGF23Q9GZV9 251 aaPredicted RBP6.45□□□□□ -1.38
LINC00641-201ENST00000555379 SPATA12Q7Z6I5 190 aa6.44□□□□□ -1.38
LINC00641-201ENST00000555379 ODF3L1Q8IXM7 274 aa6.44□□□□□ -1.38
LINC00641-201ENST00000555379 MRPL35Q9NZE8 188 aaKnown RBP6.44□□□□□ -1.38
LINC00641-201ENST00000555379 TRBV12-3P01733 135 aa6.44□□□□□ -1.38
LINC00641-201ENST00000555379 RTTNQ86VV8 2226 aa6.44□□□□□ -1.38
LINC00641-201ENST00000555379 PROP1O75360 226 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms