RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 H3BNG1 76 aa10.03□□□□□ -0.8
CHD8-208ENST00000555301 SMIM17P0DL12 118 aa10.03□□□□□ -0.8
CHD8-208ENST00000555301 TWIST1Q15672 202 aa10.03□□□□□ -0.8
CHD8-208ENST00000555301 FAM74A4Q5TZK3 123 aa10.03□□□□□ -0.8
CHD8-208ENST00000555301 SAMD10Q9BYL1 202 aa10.03□□□□□ -0.8
CHD8-208ENST00000555301 CTDSP1Q9GZU7 261 aa10.03□□□□□ -0.8
CHD8-208ENST00000555301 A0A087WWL8 130 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 IGHV3-73A0A0B4J1V6 119 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 A0A1B0GUT8 65 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 APOC3P02656 99 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 CRYGDP07320 174 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 GATA1P15976 413 aaPredicted RBP10.02□□□□□ -0.81
CHD8-208ENST00000555301 CRYBA4P53673 196 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 RHEBQ15382 184 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 UFSP1Q6NVU6 142 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 SVBPQ8N300 66 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 C15orf53Q8NAA6 179 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 NUP35Q8NFH5 326 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 MSRB1Q9NZV6 116 aa10.02□□□□□ -0.81
CHD8-208ENST00000555301 A0A0J9YY99 117 aa10.01□□□□□ -0.81
CHD8-208ENST00000555301 TRBV6-4A0A1B0GX49 114 aa10.01□□□□□ -0.81
CHD8-208ENST00000555301 PAX4O43316 350 aa10.01□□□□□ -0.81
CHD8-208ENST00000555301 RIGQ13278 110 aa10.01□□□□□ -0.81
CHD8-208ENST00000555301 SMIM15Q7Z3B0 74 aa10.01□□□□□ -0.81
CHD8-208ENST00000555301 C14orf178Q8N769 122 aaPredicted RBP10.01□□□□□ -0.81
CHD8-208ENST00000555301 CLRN3Q8NCR9 226 aa10.01□□□□□ -0.81
CHD8-208ENST00000555301 SNAPINO95295 136 aa10□□□□□ -0.81
CHD8-208ENST00000555301 RHOHQ15669 191 aa10□□□□□ -0.81
CHD8-208ENST00000555301 VSIG2Q96IQ7 327 aa10□□□□□ -0.81
CHD8-208ENST00000555301 TMEM242Q9NWH2 141 aa10□□□□□ -0.81
CHD8-208ENST00000555301 A0A087WWC5 75 aa9.99□□□□□ -0.81
CHD8-208ENST00000555301 C7orf77A4D0Y5 90 aa9.99□□□□□ -0.81
CHD8-208ENST00000555301 EVI2AP22794 236 aa9.99□□□□□ -0.81
CHD8-208ENST00000555301 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
CHD8-208ENST00000555301 IMMP2LQ96T52 175 aa9.99□□□□□ -0.81
CHD8-208ENST00000555301 PRADC1Q9BSG0 188 aa9.99□□□□□ -0.81
CHD8-208ENST00000555301 DPH3P1Q9H4G8 78 aa9.99□□□□□ -0.81
CHD8-208ENST00000555301 APLNQ9ULZ1 77 aa9.99□□□□□ -0.81
CHD8-208ENST00000555301 KIF25-AS1Q9Y6Z4 181 aa9.99□□□□□ -0.81
CHD8-208ENST00000555301 MUC4Q99102 2169 aa9.99□□□□□ -0.81
CHD8-208ENST00000555301 A0A1B0GW15 77 aa9.98□□□□□ -0.81
CHD8-208ENST00000555301 RAB4BP61018 213 aa9.98□□□□□ -0.81
CHD8-208ENST00000555301 ZNF56Q15929 161 aa9.98□□□□□ -0.81
CHD8-208ENST00000555301 STARD9Q9P2P6 4700 aa9.98□□□□□ -0.81
CHD8-208ENST00000555301 F5H697 171 aa9.97□□□□□ -0.81
CHD8-208ENST00000555301 K7EQD1 137 aa9.97□□□□□ -0.81
CHD8-208ENST00000555301 NUDT3O95989 172 aa9.97□□□□□ -0.81
CHD8-208ENST00000555301 S100A8P05109 93 aa9.97□□□□□ -0.81
CHD8-208ENST00000555301 FAM3BP58499 235 aaPredicted RBP9.97□□□□□ -0.81
CHD8-208ENST00000555301 KCNIP4Q6PIL6 250 aa9.97□□□□□ -0.81
CHD8-208ENST00000555301 ATP5L2Q7Z4Y8 100 aa9.97□□□□□ -0.81
CHD8-208ENST00000555301 RPS10P5Q9NQ39 176 aa9.97□□□□□ -0.81
CHD8-208ENST00000555301 ICOSQ9Y6W8 199 aa9.97□□□□□ -0.81
CHD8-208ENST00000555301 CSMD3Q7Z407 3707 aa9.96□□□□□ -0.81
CHD8-208ENST00000555301 TRBV10-1A0A0K0K1A3 114 aa9.96□□□□□ -0.82
CHD8-208ENST00000555301 MGPP08493 103 aa9.96□□□□□ -0.82
CHD8-208ENST00000555301 GYPEP15421 78 aa9.96□□□□□ -0.82
CHD8-208ENST00000555301 S100PP25815 95 aa9.96□□□□□ -0.82
CHD8-208ENST00000555301 LINC00315P59091 139 aa9.96□□□□□ -0.82
CHD8-208ENST00000555301 MRPL23Q16540 153 aaKnown RBP9.96□□□□□ -0.82
CHD8-208ENST00000555301 Q6ZSN1 163 aa9.96□□□□□ -0.82
CHD8-208ENST00000555301 BTF3L4Q96K17 158 aa9.96□□□□□ -0.82
CHD8-208ENST00000555301 TMEM191AQ9H0A3 160 aa9.96□□□□□ -0.82
CHD8-208ENST00000555301 H7C1H1 209 aa9.95□□□□□ -0.82
CHD8-208ENST00000555301 HBBP68871 147 aa9.95□□□□□ -0.82
CHD8-208ENST00000555301 MRPL54Q6P161 138 aaKnown RBP9.95□□□□□ -0.82
CHD8-208ENST00000555301 SH2D6Q7Z4S9 175 aa9.95□□□□□ -0.82
CHD8-208ENST00000555301 TRAV9-1A0A075B6T8 112 aa9.94□□□□□ -0.82
CHD8-208ENST00000555301 A0A096LPF7 62 aa9.94□□□□□ -0.82
CHD8-208ENST00000555301 SRIP30626 198 aa9.94□□□□□ -0.82
CHD8-208ENST00000555301 CAMPP49913 170 aa9.94□□□□□ -0.82
CHD8-208ENST00000555301 DYNC2H1Q8NCM8 4307 aaKnown RBP9.94□□□□□ -0.82
CHD8-208ENST00000555301 LOC100131303A0A0U1RQF7 123 aa9.93□□□□□ -0.82
CHD8-208ENST00000555301 A0A1B0GXF2 115 aa9.93□□□□□ -0.82
CHD8-208ENST00000555301 P0DMU3 169 aa9.93□□□□□ -0.82
CHD8-208ENST00000555301 FAM231AP0DMU4 169 aa9.93□□□□□ -0.82
CHD8-208ENST00000555301 FAM231CP0DMU5 169 aa9.93□□□□□ -0.82
CHD8-208ENST00000555301 SUMO4Q6EEV6 95 aa9.93□□□□□ -0.82
CHD8-208ENST00000555301 NEGR1Q7Z3B1 354 aa9.93□□□□□ -0.82
CHD8-208ENST00000555301 FRZBQ92765 325 aa9.93□□□□□ -0.82
CHD8-208ENST00000555301 RPL36AP83881 106 aaKnown RBP9.92□□□□□ -0.82
CHD8-208ENST00000555301 RPL36ALQ969Q0 106 aaKnown RBP9.92□□□□□ -0.82
CHD8-208ENST00000555301 PLECQ15149 4684 aaKnown RBP9.91□□□□□ -0.82
CHD8-208ENST00000555301 GAGE12JA6NER3 117 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 M0QY20 66 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 CCL18P55774 89 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 GAGE1Q13065 139 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 GAGE4Q13068 117 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 GAGE5Q13069 117 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 GAGE13Q4V321 117 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 LGALS9CQ6DKI2 356 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 RASL11AQ6T310 242 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 GATD1Q8NB37 220 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 DNAJC30Q96LL9 226 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 URGCP-MRPS24S4R325 110 aa9.91□□□□□ -0.82
CHD8-208ENST00000555301 TRBV7-3A0A075B6L6 115 aa9.9□□□□□ -0.82
CHD8-208ENST00000555301 RAB4AP20338 218 aa9.9□□□□□ -0.82
CHD8-208ENST00000555301 FAM104BQ5XKR9 115 aa9.9□□□□□ -0.82
CHD8-208ENST00000555301 AMN1Q8IY45 258 aa9.9□□□□□ -0.82
CHD8-208ENST00000555301 NEXN-AS1Q8NBZ9 246 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms