RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 A0A087WX48 190 aa11.17□□□□□ -0.62
XRCC3-211ENST00000555055 SYNJ2BPP57105 145 aa11.17□□□□□ -0.62
XRCC3-211ENST00000555055 SCGB2A2Q13296 93 aa11.17□□□□□ -0.62
XRCC3-211ENST00000555055 RRN3P1Q2M238 152 aa11.17□□□□□ -0.62
XRCC3-211ENST00000555055 C9orf47Q6ZRZ4 202 aa11.17□□□□□ -0.62
XRCC3-211ENST00000555055 C9orf139Q6ZV77 190 aa11.17□□□□□ -0.62
XRCC3-211ENST00000555055 GTSCR1Q86UQ5 136 aa11.17□□□□□ -0.62
XRCC3-211ENST00000555055 WFDC11Q8NEX6 87 aa11.17□□□□□ -0.62
XRCC3-211ENST00000555055 PRO0461Q9UI25 63 aa11.17□□□□□ -0.62
XRCC3-211ENST00000555055 FASNP49327 2511 aaKnown RBP11.16□□□□□ -0.62
XRCC3-211ENST00000555055 NOTCH3Q9UM47 2321 aa11.16□□□□□ -0.62
XRCC3-211ENST00000555055 TRAV12-1A0A0B4J245 112 aa11.16□□□□□ -0.62
XRCC3-211ENST00000555055 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
XRCC3-211ENST00000555055 WFDC2Q14508 124 aa11.16□□□□□ -0.62
XRCC3-211ENST00000555055 ATP6V0E2Q8NHE4 81 aa11.16□□□□□ -0.62
XRCC3-211ENST00000555055 MYOZ3Q8TDC0 251 aa11.16□□□□□ -0.62
XRCC3-211ENST00000555055 TTTY13Q9BZ97 58 aa11.16□□□□□ -0.62
XRCC3-211ENST00000555055 GCN1Q92616 2671 aaKnown RBP11.15□□□□□ -0.62
XRCC3-211ENST00000555055 TRBV7-3A0A075B6L6 115 aa11.15□□□□□ -0.62
XRCC3-211ENST00000555055 LAGE3Q14657 143 aa11.15□□□□□ -0.62
XRCC3-211ENST00000555055 ZFAND2AQ8N6M9 145 aa11.15□□□□□ -0.62
XRCC3-211ENST00000555055 DEFB104AQ8WTQ1 72 aa11.15□□□□□ -0.62
XRCC3-211ENST00000555055 VPREB3Q9UKI3 123 aa11.15□□□□□ -0.62
XRCC3-211ENST00000555055 H3BUA1 57 aa11.15□□□□□ -0.63
XRCC3-211ENST00000555055 ZNF688P0C7X2 276 aa11.15□□□□□ -0.63
XRCC3-211ENST00000555055 GAGE13Q4V321 117 aa11.15□□□□□ -0.63
XRCC3-211ENST00000555055 OR10J6PQ8NGY7 276 aa11.15□□□□□ -0.63
XRCC3-211ENST00000555055 SPAG8Q99932 426 aaPredicted RBP11.15□□□□□ -0.63
XRCC3-211ENST00000555055 MRPL35Q9NZE8 188 aaKnown RBP11.15□□□□□ -0.63
XRCC3-211ENST00000555055 M0R381 172 aa11.14□□□□□ -0.63
XRCC3-211ENST00000555055 GNRH2O43555 120 aa11.14□□□□□ -0.63
XRCC3-211ENST00000555055 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
XRCC3-211ENST00000555055 UNC79Q9P2D8 2635 aa11.14□□□□□ -0.63
XRCC3-211ENST00000555055 IGHV4-4A0A075B6R2 117 aa11.14□□□□□ -0.63
XRCC3-211ENST00000555055 IGHV4OR15-8A0A075B7B6 117 aa11.14□□□□□ -0.63
XRCC3-211ENST00000555055 A0A087WW49 117 aa11.14□□□□□ -0.63
XRCC3-211ENST00000555055 ZNF702PQ9H963 129 aa11.14□□□□□ -0.63
XRCC3-211ENST00000555055 SPANXN1Q5VSR9 72 aa11.13□□□□□ -0.63
XRCC3-211ENST00000555055 Q6YL49 198 aa11.13□□□□□ -0.63
XRCC3-211ENST00000555055 MAPKAPK5-AS1Q8N8E1 139 aa11.13□□□□□ -0.63
XRCC3-211ENST00000555055 NRACQ8N912 160 aa11.13□□□□□ -0.63
XRCC3-211ENST00000555055 C11orf44Q8N8P7 122 aa11.13□□□□□ -0.63
XRCC3-211ENST00000555055 TMEM160Q9NX00 188 aa11.13□□□□□ -0.63
XRCC3-211ENST00000555055 ANXA2RQ3ZCQ2 193 aa11.12□□□□□ -0.63
XRCC3-211ENST00000555055 KHDC1LQ5JSQ8 128 aa11.12□□□□□ -0.63
XRCC3-211ENST00000555055 TRAV12-2A0A075B6T6 113 aa11.12□□□□□ -0.63
XRCC3-211ENST00000555055 H3BMG7 143 aa11.12□□□□□ -0.63
XRCC3-211ENST00000555055 K7EMI3 77 aa11.12□□□□□ -0.63
XRCC3-211ENST00000555055 MRPL53Q96EL3 112 aaKnown RBP11.12□□□□□ -0.63
XRCC3-211ENST00000555055 HIST1H4GQ99525 98 aa11.12□□□□□ -0.63
XRCC3-211ENST00000555055 F8VRH5 84 aa11.11□□□□□ -0.63
XRCC3-211ENST00000555055 H7C1H1 209 aa11.11□□□□□ -0.63
XRCC3-211ENST00000555055 J3QLI3 93 aa11.11□□□□□ -0.63
XRCC3-211ENST00000555055 ETDBQ3ZM63 59 aa11.11□□□□□ -0.63
XRCC3-211ENST00000555055 JMJD1CQ15652 2540 aa11.11□□□□□ -0.63
XRCC3-211ENST00000555055 DCANP1Q8TF63 244 aa11.11□□□□□ -0.63
XRCC3-211ENST00000555055 MRAP2Q96G30 205 aa11.11□□□□□ -0.63
XRCC3-211ENST00000555055 MUC4Q99102 2169 aa11.11□□□□□ -0.63
XRCC3-211ENST00000555055 S100A4P26447 101 aaKnown RBP11.1□□□□□ -0.63
XRCC3-211ENST00000555055 SLURP1P55000 103 aa11.1□□□□□ -0.63
XRCC3-211ENST00000555055 CKS1BP61024 79 aa11.1□□□□□ -0.63
XRCC3-211ENST00000555055 MTURNQ8N3F0 131 aa11.1□□□□□ -0.63
XRCC3-211ENST00000555055 MYMXA0A1B0GTQ4 84 aa11.1□□□□□ -0.63
XRCC3-211ENST00000555055 FSHBP01225 129 aa11.1□□□□□ -0.63
XRCC3-211ENST00000555055 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
XRCC3-211ENST00000555055 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.09□□□□□ -0.63
XRCC3-211ENST00000555055 HOXD3P31249 432 aaPredicted RBP11.09□□□□□ -0.63
XRCC3-211ENST00000555055 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
XRCC3-211ENST00000555055 OR11H2Q8NH07 326 aa11.09□□□□□ -0.63
XRCC3-211ENST00000555055 TRAV26-1A0A087WT03 109 aa11.09□□□□□ -0.63
XRCC3-211ENST00000555055 BRI3O95415 125 aa11.09□□□□□ -0.63
XRCC3-211ENST00000555055 SH2D6Q7Z4S9 175 aa11.09□□□□□ -0.63
XRCC3-211ENST00000555055 TRAV12-3A0A0B4J271 114 aa11.08□□□□□ -0.64
XRCC3-211ENST00000555055 A6NJY4 79 aa11.08□□□□□ -0.64
XRCC3-211ENST00000555055 OVOL1O14753 267 aa11.08□□□□□ -0.64
XRCC3-211ENST00000555055 C14orf178Q8N769 122 aaPredicted RBP11.08□□□□□ -0.64
XRCC3-211ENST00000555055 LINC00477Q96M19 166 aa11.08□□□□□ -0.64
XRCC3-211ENST00000555055 C1QTNF4Q9BXJ3 329 aa11.08□□□□□ -0.64
XRCC3-211ENST00000555055 CRYBA4P53673 196 aa11.08□□□□□ -0.64
XRCC3-211ENST00000555055 ORMDL2Q53FV1 153 aa11.08□□□□□ -0.64
XRCC3-211ENST00000555055 MORN3Q6PF18 240 aaPredicted RBP11.08□□□□□ -0.64
XRCC3-211ENST00000555055 KMT2BQ9UMN6 2715 aaPredicted RBP11.07□□□□□ -0.64
XRCC3-211ENST00000555055 JPT2Q9H910 190 aa11.07□□□□□ -0.64
XRCC3-211ENST00000555055 CFAP126Q5VTH2 177 aa11.07□□□□□ -0.64
XRCC3-211ENST00000555055 SMIM2Q9BVW6 85 aa11.07□□□□□ -0.64
XRCC3-211ENST00000555055 TRAV21A0A0B4J279 112 aa11.06□□□□□ -0.64
XRCC3-211ENST00000555055 FOXI1Q12951 378 aa11.06□□□□□ -0.64
XRCC3-211ENST00000555055 LYRM7Q5U5X0 104 aa11.06□□□□□ -0.64
XRCC3-211ENST00000555055 DLX4Q92988 240 aaPredicted RBP11.06□□□□□ -0.64
XRCC3-211ENST00000555055 TOMM6Q96B49 74 aa11.06□□□□□ -0.64
XRCC3-211ENST00000555055 VCX2Q9H322 139 aa11.06□□□□□ -0.64
XRCC3-211ENST00000555055 MRPL16Q9NX20 251 aaKnown RBP11.06□□□□□ -0.64
XRCC3-211ENST00000555055 APOMO95445 188 aa11.06□□□□□ -0.64
XRCC3-211ENST00000555055 PRM2P04554 102 aa11.05□□□□□ -0.64
XRCC3-211ENST00000555055 MGPP08493 103 aa11.05□□□□□ -0.64
XRCC3-211ENST00000555055 LGALS1P09382 135 aaKnown RBP11.05□□□□□ -0.64
XRCC3-211ENST00000555055 AMTNQ6UX39 209 aa11.05□□□□□ -0.64
XRCC3-211ENST00000555055 NEXN-AS1Q8NBZ9 246 aa11.05□□□□□ -0.64
XRCC3-211ENST00000555055 RPL39LQ96EH5 51 aaKnown RBP11.05□□□□□ -0.64
XRCC3-211ENST00000555055 C20orf78Q9BR46 151 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms