RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 OR8A1Q8NGG7 326 aa8.27□□□□□ -1.09
SHMT2-216ENST00000554975 RHPN1-AS1Q9BWJ2 59 aa8.27□□□□□ -1.09
SHMT2-216ENST00000554975 IGHV4OR15-8A0A075B7B6 117 aa8.26□□□□□ -1.09
SHMT2-216ENST00000554975 A0A087WW49 117 aa8.26□□□□□ -1.09
SHMT2-216ENST00000554975 NPYP01303 97 aa8.26□□□□□ -1.09
SHMT2-216ENST00000554975 TSPOP30536 169 aa8.26□□□□□ -1.09
SHMT2-216ENST00000554975 IFI27P40305 119 aaPredicted RBP8.26□□□□□ -1.09
SHMT2-216ENST00000554975 LEPP41159 167 aa8.26□□□□□ -1.09
SHMT2-216ENST00000554975 SLURP1P55000 103 aa8.26□□□□□ -1.09
SHMT2-216ENST00000554975 RPL11P62913 178 aaKnown RBP8.26□□□□□ -1.09
SHMT2-216ENST00000554975 TDRG1Q3Y452 100 aa8.26□□□□□ -1.09
SHMT2-216ENST00000554975 AP1S3Q96PC3 154 aa8.26□□□□□ -1.09
SHMT2-216ENST00000554975 IGKV3D-20A0A0C4DH25 116 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 PRSS47A8MTI9 375 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 M0R381 172 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 LGALS9O00182 355 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 ATP5LO75964 103 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 TRBV12-3P01733 135 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 S100A4P26447 101 aaKnown RBP8.25□□□□□ -1.09
SHMT2-216ENST00000554975 TM4SF20Q53R12 229 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 ATOH7Q8N100 152 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 ZFAND2AQ8N6M9 145 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 Q8N8P6 123 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 RNF185Q96GF1 192 aa8.25□□□□□ -1.09
SHMT2-216ENST00000554975 TCAPO15273 167 aa8.24□□□□□ -1.09
SHMT2-216ENST00000554975 SAP30O75446 220 aa8.24□□□□□ -1.09
SHMT2-216ENST00000554975 TNFRSF6BO95407 300 aa8.24□□□□□ -1.09
SHMT2-216ENST00000554975 FCER1GP30273 86 aa8.24□□□□□ -1.09
SHMT2-216ENST00000554975 SNRPD3P62318 126 aaKnown RBP8.24□□□□□ -1.09
SHMT2-216ENST00000554975 DLX4Q92988 240 aaPredicted RBP8.24□□□□□ -1.09
SHMT2-216ENST00000554975 IFI27L1Q96BM0 104 aa8.24□□□□□ -1.09
SHMT2-216ENST00000554975 FAM19A4Q96LR4 140 aa8.24□□□□□ -1.09
SHMT2-216ENST00000554975 DPH3P1Q9H4G8 78 aa8.24□□□□□ -1.09
SHMT2-216ENST00000554975 GOLT1BQ9Y3E0 138 aa8.24□□□□□ -1.09
SHMT2-216ENST00000554975 LOC389332A0A1B0GUA5 103 aa8.23□□□□□ -1.09
SHMT2-216ENST00000554975 H3BVH4 76 aa8.23□□□□□ -1.09
SHMT2-216ENST00000554975 DUSP14O95147 198 aaKnown RBP8.23□□□□□ -1.09
SHMT2-216ENST00000554975 NCR2O95944 276 aa8.23□□□□□ -1.09
SHMT2-216ENST00000554975 G0S2P27469 103 aa8.23□□□□□ -1.09
SHMT2-216ENST00000554975 C20orf173Q96LM9 149 aa8.23□□□□□ -1.09
SHMT2-216ENST00000554975 A0A096LNJ9 63 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 NXPH4O95158 308 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 IGHV4-30-4P0DP06 118 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 INSL3P51460 131 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 GAGE1Q13065 139 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 BATFQ16520 125 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 LINC00173Q6ZV60 143 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 OR2K2Q8NGT1 345 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 C20orf78Q9BR46 151 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 SCRT2Q9NQ03 307 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 C11orf21Q9P2W6 132 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 PHLDA3Q9Y5J5 127 aa8.22□□□□□ -1.09
SHMT2-216ENST00000554975 TIMM8BQ9Y5J9 83 aaPredicted RBP8.22□□□□□ -1.09
SHMT2-216ENST00000554975 MUC4Q99102 2169 aa8.21□□□□□ -1.09
SHMT2-216ENST00000554975 TRAV2A0A0B4J234 112 aa8.21□□□□□ -1.1
SHMT2-216ENST00000554975 KLLNB2CW77 178 aa8.21□□□□□ -1.1
SHMT2-216ENST00000554975 COX8AP10176 69 aa8.21□□□□□ -1.1
SHMT2-216ENST00000554975 ORMDL2Q53FV1 153 aa8.21□□□□□ -1.1
SHMT2-216ENST00000554975 Q8N1Y9 231 aa8.21□□□□□ -1.1
SHMT2-216ENST00000554975 SMIM2Q9BVW6 85 aa8.21□□□□□ -1.1
SHMT2-216ENST00000554975 C19orf73Q9NVV2 129 aa8.21□□□□□ -1.1
SHMT2-216ENST00000554975 MUC21A0A0G2JKD1 596 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 MUC21A0A140T8X8 626 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 H0Y8G0 127 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 LAGE3Q14657 143 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 KIR3DS1Q14943 382 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 MUC21Q5SSG8 566 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 PRR9Q5T870 116 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 FAM159AQ6UWV7 190 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 SYT8Q8NBV8 401 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 OR9G4Q8NGQ1 327 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 DCANP1Q8TF63 244 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 LINC00476Q8WZB0 136 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 RETNQ9HD89 108 aa8.2□□□□□ -1.1
SHMT2-216ENST00000554975 hDV102S1A0JD36 115 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 C7orf71A4D174 169 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 SMKR1H3BMG3 65 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 K7EQG2 157 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 DLEU1O43261 78 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 SMIM17P0DL12 118 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 PRB4P10163 310 aaPredicted RBP8.19□□□□□ -1.1
SHMT2-216ENST00000554975 HLA-DRB4P13762 266 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 SYNJ2BPP57105 145 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 RPL32P62910 135 aaKnown RBP8.19□□□□□ -1.1
SHMT2-216ENST00000554975 ANXA2RQ3ZCQ2 193 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 SPATA25Q9BR10 227 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 MSRB1Q9NZV6 116 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 PEMTQ9UBM1 199 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 HLA-DRB4X5D2U9 266 aa8.19□□□□□ -1.1
SHMT2-216ENST00000554975 SIVA1O15304 175 aa8.18□□□□□ -1.1
SHMT2-216ENST00000554975 EVI2AP22794 236 aa8.18□□□□□ -1.1
SHMT2-216ENST00000554975 MAJINQ3KP22 176 aa8.18□□□□□ -1.1
SHMT2-216ENST00000554975 ZNF575Q86XF7 245 aa8.18□□□□□ -1.1
SHMT2-216ENST00000554975 NRACQ8N912 160 aa8.18□□□□□ -1.1
SHMT2-216ENST00000554975 FAM110AQ9BQ89 295 aa8.18□□□□□ -1.1
SHMT2-216ENST00000554975 IGLV2-18A0A075B6J9 118 aa8.17□□□□□ -1.1
SHMT2-216ENST00000554975 TRGV11A0A075B6L2 103 aa8.17□□□□□ -1.1
SHMT2-216ENST00000554975 A0A0J9YX75 114 aa8.17□□□□□ -1.1
SHMT2-216ENST00000554975 RNASE4P34096 147 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms