RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 EIF5A2Q9GZV4 153 aaKnown RBP8.48□□□□□ -1.05
SYNE2-214ENST00000554928 RNASE7Q9H1E1 156 aaKnown RBP8.48□□□□□ -1.05
SYNE2-214ENST00000554928 A8MWV9 139 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 NXPH4O95158 308 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 IGLC6P0CF74 106 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 MED14OSP0DP75 135 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 SRIP30626 198 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 FAM3BP58499 235 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-214ENST00000554928 PIK3CD-AS1Q5SR53 167 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 FAM74A4Q5TZK3 123 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 ZFP82Q8N141 532 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 SMIM12Q96EX1 92 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 UPK3BQ9BT76 320 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 Q9H8V8 135 aa8.47□□□□□ -1.05
SYNE2-214ENST00000554928 NBDYA0A0U1RRE5 68 aa8.46□□□□□ -1.06
SYNE2-214ENST00000554928 TRBV6-4A0A1B0GX49 114 aa8.46□□□□□ -1.06
SYNE2-214ENST00000554928 ZFP2Q6ZN57 461 aa8.46□□□□□ -1.06
SYNE2-214ENST00000554928 NEGR1Q7Z3B1 354 aa8.46□□□□□ -1.06
SYNE2-214ENST00000554928 SYT8Q8NBV8 401 aa8.46□□□□□ -1.06
SYNE2-214ENST00000554928 DAZAP1Q96EP5 407 aaKnown RBP8.46□□□□□ -1.06
SYNE2-214ENST00000554928 MSRB1Q9NZV6 116 aa8.46□□□□□ -1.06
SYNE2-214ENST00000554928 A6NJY4 79 aa8.45□□□□□ -1.06
SYNE2-214ENST00000554928 P01737 135 aa8.45□□□□□ -1.06
SYNE2-214ENST00000554928 OR5AL1P0C617 328 aa8.45□□□□□ -1.06
SYNE2-214ENST00000554928 TNP2Q05952 138 aa8.45□□□□□ -1.06
SYNE2-214ENST00000554928 RHOHQ15669 191 aa8.45□□□□□ -1.06
SYNE2-214ENST00000554928 TPPP3Q9BW30 176 aa8.45□□□□□ -1.06
SYNE2-214ENST00000554928 HECTD4Q9Y4D8 3996 aa8.45□□□□□ -1.06
SYNE2-214ENST00000554928 PKD1P98161 4303 aa8.44□□□□□ -1.06
SYNE2-214ENST00000554928 GAGE12JA6NER3 117 aa8.44□□□□□ -1.06
SYNE2-214ENST00000554928 LINC00694P0DN24 101 aa8.44□□□□□ -1.06
SYNE2-214ENST00000554928 GAGE1Q13065 139 aa8.44□□□□□ -1.06
SYNE2-214ENST00000554928 GAGE4Q13068 117 aa8.44□□□□□ -1.06
SYNE2-214ENST00000554928 GAGE5Q13069 117 aa8.44□□□□□ -1.06
SYNE2-214ENST00000554928 GAGE13Q4V321 117 aa8.44□□□□□ -1.06
SYNE2-214ENST00000554928 WFDC10BQ8IUB3 73 aa8.44□□□□□ -1.06
SYNE2-214ENST00000554928 FER1L6-AS1Q8NA97 138 aa8.44□□□□□ -1.06
SYNE2-214ENST00000554928 SMIM7Q9BQ49 75 aa8.44□□□□□ -1.06
SYNE2-214ENST00000554928 CIDEAO60543 219 aa8.43□□□□□ -1.06
SYNE2-214ENST00000554928 LINC00315P59091 139 aa8.43□□□□□ -1.06
SYNE2-214ENST00000554928 SPANXN1Q5VSR9 72 aa8.43□□□□□ -1.06
SYNE2-214ENST00000554928 LYZL1Q6UWQ5 148 aa8.43□□□□□ -1.06
SYNE2-214ENST00000554928 LINC01551Q86U37 167 aa8.43□□□□□ -1.06
SYNE2-214ENST00000554928 PRADC1Q9BSG0 188 aa8.43□□□□□ -1.06
SYNE2-214ENST00000554928 RPP21Q9H633 154 aaKnown RBP8.43□□□□□ -1.06
SYNE2-214ENST00000554928 KIF25-AS1Q9Y6Z4 181 aa8.43□□□□□ -1.06
SYNE2-214ENST00000554928 ZNF727A8MUV8 499 aa8.42□□□□□ -1.06
SYNE2-214ENST00000554928 RHODO00212 210 aa8.42□□□□□ -1.06
SYNE2-214ENST00000554928 NDUFS6O75380 124 aaKnown RBP8.42□□□□□ -1.06
SYNE2-214ENST00000554928 RPS20P60866 119 aaKnown RBP8.42□□□□□ -1.06
SYNE2-214ENST00000554928 IFITM2Q01629 132 aa8.42□□□□□ -1.06
SYNE2-214ENST00000554928 GTSF1Q8WW33 167 aa8.42□□□□□ -1.06
SYNE2-214ENST00000554928 SIVA1O15304 175 aa8.41□□□□□ -1.06
SYNE2-214ENST00000554928 C1orf134Q5TEV5 83 aa8.41□□□□□ -1.06
SYNE2-214ENST00000554928 BIN3Q9NQY0 253 aa8.41□□□□□ -1.06
SYNE2-214ENST00000554928 TNFRSF18Q9Y5U5 241 aa8.41□□□□□ -1.06
SYNE2-214ENST00000554928 GATCO43716 136 aaKnown RBP8.4□□□□□ -1.06
SYNE2-214ENST00000554928 CTRLP40313 264 aa8.4□□□□□ -1.06
SYNE2-214ENST00000554928 FAM231DQ6ZW35 169 aa8.4□□□□□ -1.06
SYNE2-214ENST00000554928 Q8N3U1 123 aa8.4□□□□□ -1.06
SYNE2-214ENST00000554928 ATP6V0E2Q8NHE4 81 aa8.4□□□□□ -1.06
SYNE2-214ENST00000554928 LY96Q9Y6Y9 160 aa8.4□□□□□ -1.06
SYNE2-214ENST00000554928 PKHD1P08F94 4074 aa8.39□□□□□ -1.07
SYNE2-214ENST00000554928 A0A1B0GVY2 172 aa8.39□□□□□ -1.07
SYNE2-214ENST00000554928 EVI2AP22794 236 aa8.39□□□□□ -1.07
SYNE2-214ENST00000554928 TIRAPP58753 221 aa8.39□□□□□ -1.07
SYNE2-214ENST00000554928 RPL23P62829 140 aaKnown RBP8.39□□□□□ -1.07
SYNE2-214ENST00000554928 ZNF56Q15929 161 aa8.39□□□□□ -1.07
SYNE2-214ENST00000554928 C6orf223Q8N319 242 aa8.39□□□□□ -1.07
SYNE2-214ENST00000554928 DNAH5Q8TE73 4624 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 XKRY2A2RUG3 117 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 PRSS29PA6NIE9 313 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 MGPP08493 103 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 NTF3P20783 257 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 FOXA3P55318 350 aaPredicted RBP8.38□□□□□ -1.07
SYNE2-214ENST00000554928 ERVFC1-1P60608 527 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 CACNG7P62955 275 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 PEA15Q15121 130 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 NEXN-AS1Q8NBZ9 246 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 ISOC2Q96AB3 205 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 AP1S3Q96PC3 154 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
SYNE2-214ENST00000554928 A0A1W2PPQ1 181 aa8.37□□□□□ -1.07
SYNE2-214ENST00000554928 F2Z2F3 143 aa8.37□□□□□ -1.07
SYNE2-214ENST00000554928 F5H697 171 aa8.37□□□□□ -1.07
SYNE2-214ENST00000554928 RAB4BP61018 213 aa8.37□□□□□ -1.07
SYNE2-214ENST00000554928 TMEM241Q24JQ0 296 aa8.37□□□□□ -1.07
SYNE2-214ENST00000554928 LELP1Q5T871 98 aa8.37□□□□□ -1.07
SYNE2-214ENST00000554928 SUMO4Q6EEV6 95 aa8.37□□□□□ -1.07
SYNE2-214ENST00000554928 SH2D6Q7Z4S9 175 aa8.37□□□□□ -1.07
SYNE2-214ENST00000554928 PGLYRP4Q96LB8 373 aa8.37□□□□□ -1.07
SYNE2-214ENST00000554928 V9GYV3 84 aa8.37□□□□□ -1.07
SYNE2-214ENST00000554928 LRP1BQ9NZR2 4599 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 IGHV3-38A0A0C4DH36 116 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 DNAH10OSP0CZ25 163 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 UBE2D3P61077 147 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 UBE2D2P62837 147 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 ADIRFQ15847 76 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 TTC32Q5I0X7 151 aa8.36□□□□□ -1.07
SYNE2-214ENST00000554928 OR10J3Q5JRS4 329 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms