RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 SNHG12Q9BXW3 62 aa8.89□□□□□ -0.99
RIPK3-204ENST00000554756 ZMAT4Q9H898 229 aa8.89□□□□□ -0.99
RIPK3-204ENST00000554756 C11orf21Q9P2W6 132 aa8.89□□□□□ -0.99
RIPK3-204ENST00000554756 DNAH3Q8TD57 4116 aa8.89□□□□□ -0.99
RIPK3-204ENST00000554756 HSBP1L1C9JCN9 74 aa8.89□□□□□ -0.99
RIPK3-204ENST00000554756 IFI27P40305 119 aaPredicted RBP8.89□□□□□ -0.99
RIPK3-204ENST00000554756 APOC4P55056 127 aa8.89□□□□□ -0.99
RIPK3-204ENST00000554756 F6UB75 175 aa8.88□□□□□ -0.99
RIPK3-204ENST00000554756 TRPT1Q86TN4 253 aaKnown RBP8.88□□□□□ -0.99
RIPK3-204ENST00000554756 MRAP2Q96G30 205 aa8.88□□□□□ -0.99
RIPK3-204ENST00000554756 SPATA25Q9BR10 227 aa8.88□□□□□ -0.99
RIPK3-204ENST00000554756 MRPS16Q9Y3D3 137 aaKnown RBP8.88□□□□□ -0.99
RIPK3-204ENST00000554756 EREGO14944 169 aa8.87□□□□□ -0.99
RIPK3-204ENST00000554756 NPYP01303 97 aa8.87□□□□□ -0.99
RIPK3-204ENST00000554756 IGKV3-20P01619 116 aa8.87□□□□□ -0.99
RIPK3-204ENST00000554756 ASIPP42127 132 aa8.87□□□□□ -0.99
RIPK3-204ENST00000554756 HNRNPA3P51991 378 aaKnown RBP8.87□□□□□ -0.99
RIPK3-204ENST00000554756 SPANXN1Q5VSR9 72 aa8.87□□□□□ -0.99
RIPK3-204ENST00000554756 CSTL1Q9H114 145 aa8.87□□□□□ -0.99
RIPK3-204ENST00000554756 KLLNB2CW77 178 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 TNFRSF6BO95407 300 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 PRR9Q5T870 116 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 KIR2DL5BQ8NHK3 375 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 A0A096LNJ9 63 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 H3BMM0 161 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 HLA-DRB4P13762 266 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 LEPP41159 167 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 DEFB135Q30KP9 77 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 LGALS9BQ3B8N2 356 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 LGALS9CQ6DKI2 356 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 Q6ZN92 141 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 FOXI2Q6ZQN5 318 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 LINC00173Q6ZV60 143 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 SCRT2Q9NQ03 307 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 MSRB1Q9NZV6 116 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 HLA-DRB4X5D2U9 266 aa8.86□□□□□ -0.99
RIPK3-204ENST00000554756 MUC21A0A0G2JKD1 596 aa8.85□□□□□ -0.99
RIPK3-204ENST00000554756 MUC21A0A140T8X8 626 aa8.85□□□□□ -0.99
RIPK3-204ENST00000554756 LOC389332A0A1B0GUA5 103 aa8.85□□□□□ -0.99
RIPK3-204ENST00000554756 K7EMI3 77 aa8.85□□□□□ -0.99
RIPK3-204ENST00000554756 NUTF2P61970 127 aaKnown RBP8.85□□□□□ -0.99
RIPK3-204ENST00000554756 MUC21Q5SSG8 566 aa8.85□□□□□ -0.99
RIPK3-204ENST00000554756 Q8N8P6 123 aa8.85□□□□□ -0.99
RIPK3-204ENST00000554756 A0A0J9YX75 114 aa8.84□□□□□ -0.99
RIPK3-204ENST00000554756 H3BVH4 76 aa8.84□□□□□ -0.99
RIPK3-204ENST00000554756 NXPH4O95158 308 aa8.84□□□□□ -0.99
RIPK3-204ENST00000554756 PPP1R17O96001 155 aa8.84□□□□□ -0.99
RIPK3-204ENST00000554756 S100A4P26447 101 aaKnown RBP8.84□□□□□ -0.99
RIPK3-204ENST00000554756 FCER1GP30273 86 aa8.84□□□□□ -0.99
RIPK3-204ENST00000554756 FXYD7P58549 80 aa8.84□□□□□ -0.99
RIPK3-204ENST00000554756 SSTP61278 116 aa8.84□□□□□ -0.99
RIPK3-204ENST00000554756 ATOH7Q8N100 152 aa8.84□□□□□ -0.99
RIPK3-204ENST00000554756 PMCHL2Q9BQD1 86 aa8.84□□□□□ -0.99
RIPK3-204ENST00000554756 OVOL2Q9BRP0 275 aa8.84□□□□□ -0.99
RIPK3-204ENST00000554756 PRKDCP78527 4128 aaKnown RBP8.84□□□□□ -0.99
RIPK3-204ENST00000554756 A0A1B0GV90 55 aa8.84□□□□□ -1
RIPK3-204ENST00000554756 M0R381 172 aa8.84□□□□□ -1
RIPK3-204ENST00000554756 SPRY2O43597 315 aa8.84□□□□□ -1
RIPK3-204ENST00000554756 DUSP14O95147 198 aaKnown RBP8.84□□□□□ -1
RIPK3-204ENST00000554756 NCR2O95944 276 aa8.84□□□□□ -1
RIPK3-204ENST00000554756 TSPOP30536 169 aa8.84□□□□□ -1
RIPK3-204ENST00000554756 MORN3Q6PF18 240 aaPredicted RBP8.84□□□□□ -1
RIPK3-204ENST00000554756 SMKR1H3BMG3 65 aa8.83□□□□□ -1
RIPK3-204ENST00000554756 GIG44P09565 113 aaPredicted RBP8.83□□□□□ -1
RIPK3-204ENST00000554756 EVI2AP22794 236 aa8.83□□□□□ -1
RIPK3-204ENST00000554756 IFI27L1Q96BM0 104 aa8.83□□□□□ -1
RIPK3-204ENST00000554756 AP1S3Q96PC3 154 aa8.83□□□□□ -1
RIPK3-204ENST00000554756 DPH3P1Q9H4G8 78 aa8.83□□□□□ -1
RIPK3-204ENST00000554756 PHLDA3Q9Y5J5 127 aa8.83□□□□□ -1
RIPK3-204ENST00000554756 RNASE4P34096 147 aaKnown RBP8.82□□□□□ -1
RIPK3-204ENST00000554756 ANXA2RQ3ZCQ2 193 aa8.82□□□□□ -1
RIPK3-204ENST00000554756 NRACQ8N912 160 aa8.82□□□□□ -1
RIPK3-204ENST00000554756 RNF183Q96D59 192 aa8.82□□□□□ -1
RIPK3-204ENST00000554756 C20orf78Q9BR46 151 aa8.82□□□□□ -1
RIPK3-204ENST00000554756 IGLV2-18A0A075B6J9 118 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 COL5A1-AS1Q5SY13 56 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 SLC25A34Q6PIV7 304 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 FAM159AQ6UWV7 190 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 POM121L12Q8N7R1 296 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 XCL2Q9UBD3 114 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 GOLT1BQ9Y3E0 138 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 C7orf71A4D174 169 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 ATP5LO75964 103 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 MAJINQ3KP22 176 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 LINC00469Q8N7U9 141 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 TP53TG1Q9Y2A0 90 aa8.81□□□□□ -1
RIPK3-204ENST00000554756 KIR3DS1Q14943 382 aa8.8□□□□□ -1
RIPK3-204ENST00000554756 LINC01549A6NIU2 74 aa8.79□□□□□ -1
RIPK3-204ENST00000554756 RNASE3P12724 160 aaKnown RBP8.79□□□□□ -1
RIPK3-204ENST00000554756 RPL32P62910 135 aaKnown RBP8.79□□□□□ -1
RIPK3-204ENST00000554756 LAGE3Q14657 143 aa8.79□□□□□ -1
RIPK3-204ENST00000554756 AMTNQ6UX39 209 aa8.79□□□□□ -1
RIPK3-204ENST00000554756 OR11H2Q8NH07 326 aa8.79□□□□□ -1
RIPK3-204ENST00000554756 CLUHP3Q96NS8 147 aa8.79□□□□□ -1
RIPK3-204ENST00000554756 TIMM8BQ9Y5J9 83 aaPredicted RBP8.79□□□□□ -1
RIPK3-204ENST00000554756 hDV102S1A0JD36 115 aa8.78□□□□□ -1
RIPK3-204ENST00000554756 SPINK13Q1W4C9 94 aa8.78□□□□□ -1
RIPK3-204ENST00000554756 ORMDL2Q53FV1 153 aa8.78□□□□□ -1
RIPK3-204ENST00000554756 SMIM2Q9BVW6 85 aa8.78□□□□□ -1
RIPK3-204ENST00000554756 C1QTNF4Q9BXJ3 329 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms