RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 FAM74A4Q5TZK3 123 aa15.75■□□□□ 0.11
FOXA1-204ENST00000554607 OR11H4Q8NGC9 324 aa15.75■□□□□ 0.11
FOXA1-204ENST00000554607 ARL2-SNX15V9GYD0 113 aa15.75■□□□□ 0.11
FOXA1-204ENST00000554607 A0A1W2PRE2 83 aa15.74■□□□□ 0.11
FOXA1-204ENST00000554607 ACTR3CQ9C0K3 210 aaPredicted RBP15.74■□□□□ 0.11
FOXA1-204ENST00000554607 PKHD1L1Q86WI1 4243 aa15.74■□□□□ 0.11
FOXA1-204ENST00000554607 TRAV34A0A0B4J273 112 aa15.73■□□□□ 0.11
FOXA1-204ENST00000554607 TRBV10-1A0A0K0K1A3 114 aa15.73■□□□□ 0.11
FOXA1-204ENST00000554607 ARMS2P0C7Q2 107 aa15.73■□□□□ 0.11
FOXA1-204ENST00000554607 RPL37AP61513 92 aaKnown RBP15.73■□□□□ 0.11
FOXA1-204ENST00000554607 C1orf43Q9BWL3 253 aa15.73■□□□□ 0.11
FOXA1-204ENST00000554607 ATP6V0CP27449 155 aa15.72■□□□□ 0.11
FOXA1-204ENST00000554607 RPL36AP83881 106 aaKnown RBP15.72■□□□□ 0.11
FOXA1-204ENST00000554607 IFITM3Q01628 133 aa15.72■□□□□ 0.11
FOXA1-204ENST00000554607 RPL36ALQ969Q0 106 aaKnown RBP15.72■□□□□ 0.11
FOXA1-204ENST00000554607 SFRP2Q96HF1 295 aa15.72■□□□□ 0.11
FOXA1-204ENST00000554607 KRBOX1C9JBD0 128 aa15.71■□□□□ 0.11
FOXA1-204ENST00000554607 IFNA7P01567 189 aa15.71■□□□□ 0.11
FOXA1-204ENST00000554607 TNFSF18Q9UNG2 199 aa15.71■□□□□ 0.11
FOXA1-204ENST00000554607 PHLDA3Q9Y5J5 127 aa15.71■□□□□ 0.11
FOXA1-204ENST00000554607 A0A087WWL8 130 aa15.7■□□□□ 0.1
FOXA1-204ENST00000554607 TMEM262E9PQX1 116 aa15.7■□□□□ 0.1
FOXA1-204ENST00000554607 TRBV7-3A0A075B6L6 115 aa15.69■□□□□ 0.1
FOXA1-204ENST00000554607 CRPP02741 224 aa15.69■□□□□ 0.1
FOXA1-204ENST00000554607 UBE2D3P61077 147 aa15.69■□□□□ 0.1
FOXA1-204ENST00000554607 UBE2D2P62837 147 aa15.69■□□□□ 0.1
FOXA1-204ENST00000554607 M0R036 132 aa15.68■□□□□ 0.1
FOXA1-204ENST00000554607 TPT1P13693 172 aaKnown RBP15.68■□□□□ 0.1
FOXA1-204ENST00000554607 Q86TA4 180 aa15.68■□□□□ 0.1
FOXA1-204ENST00000554607 GRIFINA4D1Z8 144 aa15.67■□□□□ 0.1
FOXA1-204ENST00000554607 PEX7O00628 323 aa15.67■□□□□ 0.1
FOXA1-204ENST00000554607 CRIP1P50238 77 aa15.67■□□□□ 0.1
FOXA1-204ENST00000554607 DEFA1P59665 94 aa15.67■□□□□ 0.1
FOXA1-204ENST00000554607 DEFA3P59666 94 aa15.67■□□□□ 0.1
FOXA1-204ENST00000554607 ENHOQ6UWT2 76 aa15.67■□□□□ 0.1
FOXA1-204ENST00000554607 HIST1H2BAQ96A08 127 aa15.67■□□□□ 0.1
FOXA1-204ENST00000554607 NKX6-2Q9C056 277 aaPredicted RBP15.67■□□□□ 0.1
FOXA1-204ENST00000554607 ZFP30Q9Y2G7 519 aa15.67■□□□□ 0.1
FOXA1-204ENST00000554607 M0R381 172 aa15.66■□□□□ 0.1
FOXA1-204ENST00000554607 FAM162BQ5T6X4 162 aa15.66■□□□□ 0.1
FOXA1-204ENST00000554607 DGAT2L7PQ6IED9 249 aa15.66■□□□□ 0.1
FOXA1-204ENST00000554607 COX8CQ7Z4L0 72 aa15.66■□□□□ 0.1
FOXA1-204ENST00000554607 ZFP82Q8N141 532 aa15.66■□□□□ 0.1
FOXA1-204ENST00000554607 ZC2HC1AQ96GY0 325 aa15.66■□□□□ 0.1
FOXA1-204ENST00000554607 TRBV6-8A0A0A6YYG3 113 aa15.65■□□□□ 0.1
FOXA1-204ENST00000554607 SH2D1AO60880 128 aa15.65■□□□□ 0.1
FOXA1-204ENST00000554607 C15orf54Q8N8G6 183 aa15.65■□□□□ 0.1
FOXA1-204ENST00000554607 AQP10Q96PS8 301 aa15.65■□□□□ 0.1
FOXA1-204ENST00000554607 USP17L23D6RBM5 183 aa15.64■□□□□ 0.09
FOXA1-204ENST00000554607 PKIAP61925 76 aa15.64■□□□□ 0.09
FOXA1-204ENST00000554607 OR10G8Q8NGN5 311 aa15.64■□□□□ 0.09
FOXA1-204ENST00000554607 DAZAP1Q96EP5 407 aaKnown RBP15.64■□□□□ 0.09
FOXA1-204ENST00000554607 UBE2G2P60604 165 aa15.63■□□□□ 0.09
FOXA1-204ENST00000554607 ANGP03950 147 aaKnown RBP15.62■□□□□ 0.09
FOXA1-204ENST00000554607 MIAQ16674 131 aa15.62■□□□□ 0.09
FOXA1-204ENST00000554607 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.62■□□□□ 0.09
FOXA1-204ENST00000554607 CTXND1A0A1B0GTU2 59 aa15.61■□□□□ 0.09
FOXA1-204ENST00000554607 HLA-DQA1P01909 254 aa15.61■□□□□ 0.09
FOXA1-204ENST00000554607 HNRNPA3P51991 378 aaKnown RBP15.61■□□□□ 0.09
FOXA1-204ENST00000554607 RAB4BP61018 213 aa15.61■□□□□ 0.09
FOXA1-204ENST00000554607 LINC01559Q495D7 138 aa15.61■□□□□ 0.09
FOXA1-204ENST00000554607 MPV17L2Q567V2 206 aa15.61■□□□□ 0.09
FOXA1-204ENST00000554607 C9orf163Q8N9P6 203 aa15.61■□□□□ 0.09
FOXA1-204ENST00000554607 FMC1Q96HJ9 113 aa15.61■□□□□ 0.09
FOXA1-204ENST00000554607 FAM74A7A6NL05 159 aa15.6■□□□□ 0.09
FOXA1-204ENST00000554607 ZNF674Q2M3X9 581 aa15.6■□□□□ 0.09
FOXA1-204ENST00000554607 TMSB15BA0A087X1C1 80 aa15.59■□□□□ 0.09
FOXA1-204ENST00000554607 PRSS1P07477 247 aa15.59■□□□□ 0.09
FOXA1-204ENST00000554607 UBE2G1P62253 170 aa15.59■□□□□ 0.09
FOXA1-204ENST00000554607 ZNF726P1Q15940 193 aa15.59■□□□□ 0.09
FOXA1-204ENST00000554607 CHCHD5Q9BSY4 110 aa15.59■□□□□ 0.09
FOXA1-204ENST00000554607 BORCS7-ASMTA0A0B4J1R7 106 aa15.57■□□□□ 0.08
FOXA1-204ENST00000554607 PTTG1O95997 202 aa15.57■□□□□ 0.08
FOXA1-204ENST00000554607 RPL19P84098 196 aaKnown RBP15.57■□□□□ 0.08
FOXA1-204ENST00000554607 TMEM97Q5BJF2 176 aa15.57■□□□□ 0.08
FOXA1-204ENST00000554607 NEXN-AS1Q8NBZ9 246 aa15.57■□□□□ 0.08
FOXA1-204ENST00000554607 A0A0D9SG52 128 aa15.56■□□□□ 0.08
FOXA1-204ENST00000554607 TRBV6-1A0A0K0K1D8 114 aa15.56■□□□□ 0.08
FOXA1-204ENST00000554607 ZNF56Q15929 161 aa15.56■□□□□ 0.08
FOXA1-204ENST00000554607 Q6ZRU5 148 aa15.56■□□□□ 0.08
FOXA1-204ENST00000554607 PRR27Q6MZM9 219 aa15.55■□□□□ 0.08
FOXA1-204ENST00000554607 INO80EQ8NBZ0 244 aaPredicted RBP15.55■□□□□ 0.08
FOXA1-204ENST00000554607 TCEAL7Q9BRU2 100 aa15.55■□□□□ 0.08
FOXA1-204ENST00000554607 ALG5Q9Y673 324 aa15.55■□□□□ 0.08
FOXA1-204ENST00000554607 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.55■□□□□ 0.08
FOXA1-204ENST00000554607 A6NHS1 94 aa15.54■□□□□ 0.08
FOXA1-204ENST00000554607 LTAP01374 205 aa15.54■□□□□ 0.08
FOXA1-204ENST00000554607 RPL7L1Q6DKI1 246 aaKnown RBP15.54■□□□□ 0.08
FOXA1-204ENST00000554607 CLRN3Q8NCR9 226 aa15.54■□□□□ 0.08
FOXA1-204ENST00000554607 PRR34Q9NV39 138 aa15.54■□□□□ 0.08
FOXA1-204ENST00000554607 SDIM1Q6ZPB5 146 aa15.53■□□□□ 0.08
FOXA1-204ENST00000554607 MT1HL1P0DM35 61 aa15.52■□□□□ 0.08
FOXA1-204ENST00000554607 AKR1C8PQ5T2L2 129 aa15.52■□□□□ 0.08
FOXA1-204ENST00000554607 ZNF471Q9BX82 626 aaPredicted RBP15.52■□□□□ 0.08
FOXA1-204ENST00000554607 FHITP49789 147 aa15.51■□□□□ 0.07
FOXA1-204ENST00000554607 CXCL1P09341 107 aa15.5■□□□□ 0.07
FOXA1-204ENST00000554607 RBX1P62877 108 aa15.5■□□□□ 0.07
FOXA1-204ENST00000554607 LINC00269Q8N2A0 174 aa15.5■□□□□ 0.07
FOXA1-204ENST00000554607 MED28Q9H204 178 aa15.5■□□□□ 0.07
FOXA1-204ENST00000554607 VAX2Q9UIW0 290 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms