RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 DYNLT3P51808 116 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 LINC00205P59089 165 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 EGFEM1PQ0D2K5 195 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 SPRNQ5BIV9 151 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 Q6ZRM9 215 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ZNF645Q8N7E2 425 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 CHCHD10Q8WYQ3 142 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-206ENST00000554429 ST20Q9HBF5 79 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 IL36RNQ9UBH0 155 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 MOB4Q9Y3A3 225 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 MPC1Q9Y5U8 109 aa2.03□□□□□ -2.08
PRPF39-206ENST00000554429 MGAM2Q2M2H8 2515 aa2.03□□□□□ -2.09
PRPF39-206ENST00000554429 TRBV20OR9-2A0A075B6H5 130 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 A0A0J9YXV3 536 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 M0R1W7 72 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 SYNGR2O43760 224 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 YPEL1O60688 119 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 JTBO76095 146 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 LINC00869P0C866 280 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 ERVK-16P61578 105 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 GNB2P62879 340 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF816Q0VGE8 651 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-206ENST00000554429 WFDC2Q14508 124 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 ELOBQ15370 118 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 SS18Q15532 418 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 RRN3P1Q2M238 152 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 ODF3L2Q3SX64 289 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 Q56UQ5 140 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 EBLN2Q6P2I7 272 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 Q6ZS49 121 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 SLC25A42Q86VD7 318 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 NDUFA11Q86Y39 141 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 DRAM1Q8N682 238 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 SCGB1C1Q8TD33 95 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 ITLN1Q8WWA0 313 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 YPEL2Q96QA6 119 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 PMCHL2Q9BQD1 86 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 PARLQ9H300 379 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 LAMTOR3Q9UHA4 124 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 PKD1L1Q8TDX9 2849 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 TRAV8-1A0A0A6YYK1 113 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 C3orf85A0A1B0GTC6 90 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 TMEM256-PLSCR3K7ERE1 68 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 M0R378 163 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 COX7A2LO14548 114 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 CDK2AP2O75956 126 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 NCR2O95944 276 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 TRBV12-3P01733 135 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 IGHG2P01859 326 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 RBP4P02753 201 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 HSPB1P04792 205 aaKnown RBP2.02□□□□□ -2.09
PRPF39-206ENST00000554429 MFAP2P55001 183 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 SRSF9Q13242 221 aaKnown RBP eCLIP2.02□□□□□ -2.09
PRPF39-206ENST00000554429 OR8A1Q8NGG7 326 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 NTN5Q8WTR8 489 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-206ENST00000554429 FAM103A1Q9BTL3 118 aaKnown RBP2.02□□□□□ -2.09
PRPF39-206ENST00000554429 EPDR1Q9UM22 224 aa2.02□□□□□ -2.09
PRPF39-206ENST00000554429 IGKV1-27A0A075B6S5 117 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 TRAV9-1A0A075B6T8 112 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 TRAV40A0A0B4J280 105 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 IGKV1-9A0A0C4DH69 117 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 A0A1W2PPM0 123 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 INS-IGF2F8WCM5 200 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 TMEM250H0YL14 139 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 M0R2P5 195 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 MGST3O14880 152 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 FRMD6-AS1P0C7T7 363 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 CBLN1P23435 193 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 PSMB2P49721 201 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF80P51504 273 aaPredicted RBP2.01□□□□□ -2.09
PRPF39-206ENST00000554429 FGF12P61328 243 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 RSPO1Q2MKA7 263 aaPredicted RBP2.01□□□□□ -2.09
PRPF39-206ENST00000554429 ORMDL2Q53FV1 153 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 MRPL30Q8TCC3 161 aaKnown RBP2.01□□□□□ -2.09
PRPF39-206ENST00000554429 TVP23CQ96ET8 276 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 IMMP2LQ96T52 175 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 SHANK2-AS3Q9BTD1 123 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 NAA60Q9H7X0 242 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 CTSZQ9UBR2 303 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 DNAH1Q9P2D7 4330 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 VWFP04275 2813 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 ARHGAP32A7KAX9 2087 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 TRAV12-2A0A075B6T6 113 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 CEBPZOSA8MTT3 80 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 A8MWL6 223 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 H3BRM9 83 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 ZNF253O75346 499 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 CRYGAP11844 174 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 KISS1Q15726 138 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 MIC13Q5XKP0 118 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 HCP5Q6MZN7 132 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 BPIFA4PQ86YQ2 179 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 GNPNAT1Q96EK6 184 aaPredicted RBP2.01□□□□□ -2.09
PRPF39-206ENST00000554429 LYZL4Q96KX0 146 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 TMEM243Q9BU79 118 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 DNAH9Q9NYC9 4486 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 DSCAML1Q8TD84 2053 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 MDFIC2A0A1B0GVS7 189 aa2.01□□□□□ -2.09
PRPF39-206ENST00000554429 PGPA6NDG6 321 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms