RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 RPP21Q9H633 154 aaKnown RBP4.02□□□□□ -1.77
ATXN3-226ENST00000554350 NAGKQ9UJ70 344 aa4.02□□□□□ -1.77
ATXN3-226ENST00000554350 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
ATXN3-226ENST00000554350 A0A1B0GUV1 79 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 C20orf202A1L168 122 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 C2orf70A6NJV1 201 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 SERF1AO75920 110 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 P01737 135 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 RPL7P18124 248 aaKnown RBP4.01□□□□□ -1.77
ATXN3-226ENST00000554350 PMCHP20382 165 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 FUSP35637 526 aaKnown RBP eCLIP4.01□□□□□ -1.77
ATXN3-226ENST00000554350 CRIP2P52943 208 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-226ENST00000554350 PSG9Q00887 426 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 KRTAP5-1Q6L8H4 278 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 RBPMS2Q6ZRY4 209 aaKnown RBP4.01□□□□□ -1.77
ATXN3-226ENST00000554350 C15orf53Q8NAA6 179 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 NUP35Q8NFH5 326 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 RNF125Q96EQ8 232 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 C14orf144Q96I85 54 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 KCNS1Q96KK3 526 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 C2orf88Q9BSF0 95 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 NDFIP1Q9BT67 221 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 ZNF586Q9NXT0 402 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 CLEC5AQ9NY25 188 aa4.01□□□□□ -1.77
ATXN3-226ENST00000554350 A0A1W2PS18 150 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 HIGD1CA8MV81 97 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 GNG7O60262 68 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 NUPR1O60356 82 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 ZNF324O75467 553 aaPredicted RBP4□□□□□ -1.77
ATXN3-226ENST00000554350 IGLV2-11P01706 119 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 OR5AL1P0C617 328 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 LYZP61626 148 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 HBBP68871 147 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 PMCHL1Q16048 86 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 PSG3Q16557 428 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 FAM209BQ5JX69 171 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 SAPCD1Q5SSQ6 148 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 SIGLEC15Q6ZMC9 328 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 Q86TA4 180 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 CHCHD1Q96BP2 118 aaKnown RBP4□□□□□ -1.77
ATXN3-226ENST00000554350 ZNF414Q96IQ9 312 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 LINC00479Q96M42 142 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 ALKBH7Q9BT30 221 aaPredicted RBP4□□□□□ -1.77
ATXN3-226ENST00000554350 SAMD10Q9BYL1 202 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 CSTL1Q9H114 145 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 C21orf62Q9NYP8 219 aa4□□□□□ -1.77
ATXN3-226ENST00000554350 A0A087X0K7 114 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 TRAV34A0A0B4J273 112 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 NBDYA0A0U1RRE5 68 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 GRIFINA4D1Z8 144 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 RBAKDNA6NC62 111 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 GAGE12JA6NER3 117 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 PRSS47A8MTI9 375 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 SCGB1D1O95968 90 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 CA1P00915 261 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-226ENST00000554350 IGHV3-48P01763 117 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 APOHP02749 345 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-226ENST00000554350 IL4P05112 153 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 CTSGP08311 255 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 SRIP30626 198 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 CSN1S1P47710 185 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 RPS20P60866 119 aaKnown RBP3.99□□□□□ -1.77
ATXN3-226ENST00000554350 SSTP61278 116 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 RIGQ13278 110 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 ZNF493Q6ZR52 646 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 C18orf32Q8TCD1 76 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 DEFB104AQ8WTQ1 72 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 BLNKQ8WV28 456 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 MRPL53Q96EL3 112 aaKnown RBP3.99□□□□□ -1.77
ATXN3-226ENST00000554350 NRN1Q9NPD7 142 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 PPP1R14DQ9NXH3 145 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 PSG8Q9UQ74 426 aa3.99□□□□□ -1.77
ATXN3-226ENST00000554350 NACAE9PAV3 2078 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 TRBV7-1A0A0A6YYK4 115 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 IGHV4-28A0A0C4DH34 117 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 A0A1B0GUT8 65 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 H3BUA1 57 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 CRXO43186 299 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-226ENST00000554350 CT45A10P0DMU9 189 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 AMTP48728 403 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 TCL1AP56279 114 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 GNG5P63218 68 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 SLAQ13239 276 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 MRPL54Q6P161 138 aaKnown RBP3.98□□□□□ -1.77
ATXN3-226ENST00000554350 ZNF502Q8TBZ5 544 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 GTSF1Q8WW33 167 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 BORCS7Q96B45 105 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 MIEN1Q9BRT3 115 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 SLC50A1Q9BRV3 221 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 RABAC1Q9UI14 185 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 DNAH5Q8TE73 4624 aa3.98□□□□□ -1.77
ATXN3-226ENST00000554350 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.97□□□□□ -1.77
ATXN3-226ENST00000554350 FAM223BA6NKX1 122 aa3.97□□□□□ -1.77
ATXN3-226ENST00000554350 ZNF705FA8MVS1 300 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-226ENST00000554350 M0R143 59 aa3.97□□□□□ -1.77
ATXN3-226ENST00000554350 HSBP1O75506 76 aa3.97□□□□□ -1.77
ATXN3-226ENST00000554350 ZNF705DP0CH99 300 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-226ENST00000554350 ZNF705BP0CI00 300 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-226ENST00000554350 CTRLP40313 264 aa3.97□□□□□ -1.77
ATXN3-226ENST00000554350 RELQ04864 619 aaPredicted RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms