RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 GAGE12FP0CL80 117 aa9.17□□□□□ -0.94
SHMT2-211ENST00000554310 GAGE12GP0CL81 117 aa9.17□□□□□ -0.94
SHMT2-211ENST00000554310 GAGE12IP0CL82 117 aa9.17□□□□□ -0.94
SHMT2-211ENST00000554310 Q6AWC8 147 aa9.17□□□□□ -0.94
SHMT2-211ENST00000554310 C18orf15Q96N68 181 aa9.17□□□□□ -0.94
SHMT2-211ENST00000554310 NACAE9PAV3 2078 aa9.16□□□□□ -0.94
SHMT2-211ENST00000554310 A0A1B0GXF2 115 aa9.16□□□□□ -0.94
SHMT2-211ENST00000554310 HIGD1CA8MV81 97 aa9.16□□□□□ -0.94
SHMT2-211ENST00000554310 SPINK4O60575 86 aa9.16□□□□□ -0.94
SHMT2-211ENST00000554310 FOXA3P55318 350 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-211ENST00000554310 ZNF415Q09FC8 603 aa9.16□□□□□ -0.94
SHMT2-211ENST00000554310 Q0VG73 95 aa9.16□□□□□ -0.94
SHMT2-211ENST00000554310 MRPL54Q6P161 138 aaKnown RBP9.16□□□□□ -0.94
SHMT2-211ENST00000554310 Q6ZTI0 123 aa9.16□□□□□ -0.94
SHMT2-211ENST00000554310 HIST1H2BLQ99880 126 aa9.16□□□□□ -0.94
SHMT2-211ENST00000554310 FRAS1Q86XX4 4008 aa9.16□□□□□ -0.94
SHMT2-211ENST00000554310 DNAH10Q8IVF4 4471 aa9.16□□□□□ -0.94
SHMT2-211ENST00000554310 MUC4Q99102 2169 aa9.15□□□□□ -0.94
SHMT2-211ENST00000554310 TRGV2A0A075B6R0 118 aa9.15□□□□□ -0.94
SHMT2-211ENST00000554310 TRGV1A0A0A0MS02 117 aa9.15□□□□□ -0.94
SHMT2-211ENST00000554310 OR2D3Q8NGH3 330 aa9.15□□□□□ -0.94
SHMT2-211ENST00000554310 GTSF1Q8WW33 167 aa9.15□□□□□ -0.94
SHMT2-211ENST00000554310 NDFIP1Q9BT67 221 aa9.15□□□□□ -0.94
SHMT2-211ENST00000554310 TP53TG3Q9ULZ0 132 aa9.15□□□□□ -0.94
SHMT2-211ENST00000554310 TRGV11A0A075B6L2 103 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 NUDT3O95989 172 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 ESDP10768 282 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 FABP4P15090 132 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 CRIP1P50238 77 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 RAB4BP61018 213 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 LGALS9BQ3B8N2 356 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 PDZD11Q5EBL8 140 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 OR10J3Q5JRS4 329 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 DNLZQ5SXM8 178 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 FAM159AQ6UWV7 190 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 Q6ZQT7 251 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 OR10D4PQ8NGN7 298 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 TMEM18Q96B42 140 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 C8orf49Q96NF6 230 aa9.14□□□□□ -0.95
SHMT2-211ENST00000554310 TRAV26-1A0A087WT03 109 aa9.13□□□□□ -0.95
SHMT2-211ENST00000554310 TRAV21A0A0B4J279 112 aa9.13□□□□□ -0.95
SHMT2-211ENST00000554310 H3BNG1 76 aa9.13□□□□□ -0.95
SHMT2-211ENST00000554310 APCSP02743 223 aa9.13□□□□□ -0.95
SHMT2-211ENST00000554310 HBBP68871 147 aa9.13□□□□□ -0.95
SHMT2-211ENST00000554310 TDRG1Q3Y452 100 aa9.13□□□□□ -0.95
SHMT2-211ENST00000554310 MUC21Q5SSG8 566 aa9.13□□□□□ -0.95
SHMT2-211ENST00000554310 PACRGQ96M98 296 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-211ENST00000554310 CCL18P55774 89 aa9.12□□□□□ -0.95
SHMT2-211ENST00000554310 RPS20P60866 119 aaKnown RBP9.12□□□□□ -0.95
SHMT2-211ENST00000554310 FAM162BQ5T6X4 162 aa9.12□□□□□ -0.95
SHMT2-211ENST00000554310 GATD1Q8NB37 220 aa9.12□□□□□ -0.95
SHMT2-211ENST00000554310 PGLYRP4Q96LB8 373 aa9.12□□□□□ -0.95
SHMT2-211ENST00000554310 MRPL16Q9NX20 251 aaKnown RBP9.12□□□□□ -0.95
SHMT2-211ENST00000554310 NAGKQ9UJ70 344 aa9.12□□□□□ -0.95
SHMT2-211ENST00000554310 HECTD4Q9Y4D8 3996 aa9.11□□□□□ -0.95
SHMT2-211ENST00000554310 A0A1B0GW15 77 aa9.11□□□□□ -0.95
SHMT2-211ENST00000554310 GRIFINA4D1Z8 144 aa9.11□□□□□ -0.95
SHMT2-211ENST00000554310 SH2D1AO60880 128 aa9.11□□□□□ -0.95
SHMT2-211ENST00000554310 PYY3Q5JQD4 70 aa9.11□□□□□ -0.95
SHMT2-211ENST00000554310 SPXQ9BT56 116 aa9.11□□□□□ -0.95
SHMT2-211ENST00000554310 IGLV2-18A0A075B6J9 118 aa9.1□□□□□ -0.95
SHMT2-211ENST00000554310 A0A0J9YY99 117 aa9.1□□□□□ -0.95
SHMT2-211ENST00000554310 A0A1B0GUT8 65 aa9.1□□□□□ -0.95
SHMT2-211ENST00000554310 S100A12P80511 92 aa9.1□□□□□ -0.95
SHMT2-211ENST00000554310 SLAQ13239 276 aa9.1□□□□□ -0.95
SHMT2-211ENST00000554310 RIGQ13278 110 aa9.1□□□□□ -0.95
SHMT2-211ENST00000554310 Q6ZR54 194 aa9.1□□□□□ -0.95
SHMT2-211ENST00000554310 LINC00336Q6ZUF6 198 aa9.1□□□□□ -0.95
SHMT2-211ENST00000554310 KCNS1Q96KK3 526 aa9.1□□□□□ -0.95
SHMT2-211ENST00000554310 MDFICQ9P1T7 246 aa9.1□□□□□ -0.95
SHMT2-211ENST00000554310 FABP5P3A8MUU1 101 aa9.09□□□□□ -0.95
SHMT2-211ENST00000554310 M0R2N4 97 aa9.09□□□□□ -0.95
SHMT2-211ENST00000554310 SERF1AO75920 110 aa9.09□□□□□ -0.95
SHMT2-211ENST00000554310 GZMBP10144 247 aa9.09□□□□□ -0.95
SHMT2-211ENST00000554310 SRIP30626 198 aa9.09□□□□□ -0.95
SHMT2-211ENST00000554310 CAMPP49913 170 aa9.09□□□□□ -0.95
SHMT2-211ENST00000554310 LINC00310P59036 64 aa9.09□□□□□ -0.95
SHMT2-211ENST00000554310 KIAA1644Q3SXP7 199 aa9.09□□□□□ -0.95
SHMT2-211ENST00000554310 BAGE3Q86Y29 109 aa9.09□□□□□ -0.95
SHMT2-211ENST00000554310 NIT2Q9NQR4 276 aa9.09□□□□□ -0.95
SHMT2-211ENST00000554310 IGHV3-16A0A0C4DH30 117 aa9.08□□□□□ -0.96
SHMT2-211ENST00000554310 NUPR1O60356 82 aa9.08□□□□□ -0.96
SHMT2-211ENST00000554310 ZNF80P51504 273 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-211ENST00000554310 JOSD1Q15040 202 aaPredicted RBP9.08□□□□□ -0.96
SHMT2-211ENST00000554310 ZNRF2Q8NHG8 242 aa9.08□□□□□ -0.96
SHMT2-211ENST00000554310 RASL10AQ92737 203 aa9.08□□□□□ -0.96
SHMT2-211ENST00000554310 BORCS7Q96B45 105 aa9.08□□□□□ -0.96
SHMT2-211ENST00000554310 VSIG2Q96IQ7 327 aa9.08□□□□□ -0.96
SHMT2-211ENST00000554310 LINC00588Q9Y4M8 146 aa9.08□□□□□ -0.96
SHMT2-211ENST00000554310 LINC01559Q495D7 138 aa9.07□□□□□ -0.96
SHMT2-211ENST00000554310 C18orf32Q8TCD1 76 aa9.07□□□□□ -0.96
SHMT2-211ENST00000554310 ALKBH7Q9BT30 221 aaPredicted RBP9.07□□□□□ -0.96
SHMT2-211ENST00000554310 PRO0255Q9UI72 69 aa9.07□□□□□ -0.96
SHMT2-211ENST00000554310 DNAH2Q9P225 4427 aa9.06□□□□□ -0.96
SHMT2-211ENST00000554310 F2Z2F3 143 aa9.06□□□□□ -0.96
SHMT2-211ENST00000554310 M0R2P5 195 aa9.06□□□□□ -0.96
SHMT2-211ENST00000554310 GNRH2O43555 120 aa9.06□□□□□ -0.96
SHMT2-211ENST00000554310 IGHV3-53P01767 116 aa9.06□□□□□ -0.96
SHMT2-211ENST00000554310 ARMS2P0C7Q2 107 aa9.06□□□□□ -0.96
SHMT2-211ENST00000554310 CTRLP40313 264 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms