RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 MSMPQ1L6U9 139 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 TMEM141Q96I45 108 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 TIMM17AQ99595 171 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 C16orf95Q9H693 158 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 V9GYY9 64 aa7.17□□□□□ -1.26
SIX4-202ENST00000554079 NACAE9PAV3 2078 aa7.16□□□□□ -1.26
SIX4-202ENST00000554079 ZDBF2Q9HCK1 2354 aa7.16□□□□□ -1.26
SIX4-202ENST00000554079 SYNJ2BPP57105 145 aa7.16□□□□□ -1.26
SIX4-202ENST00000554079 Q6ZS52 159 aa7.16□□□□□ -1.26
SIX4-202ENST00000554079 PRIMA1Q86XR5 153 aa7.16□□□□□ -1.26
SIX4-202ENST00000554079 DYNLRB1Q9NP97 96 aa7.16□□□□□ -1.26
SIX4-202ENST00000554079 MYO15AQ9UKN7 3530 aa7.15□□□□□ -1.26
SIX4-202ENST00000554079 BUB3O43684 328 aa7.15□□□□□ -1.26
SIX4-202ENST00000554079 FOLR3P41439 243 aa7.15□□□□□ -1.26
SIX4-202ENST00000554079 TMEM200BQ69YZ2 307 aa7.15□□□□□ -1.26
SIX4-202ENST00000554079 CCL13Q99616 98 aa7.15□□□□□ -1.26
SIX4-202ENST00000554079 FAM236DA0A1B0GTK5 79 aa7.15□□□□□ -1.27
SIX4-202ENST00000554079 PRSS2P07478 247 aa7.15□□□□□ -1.27
SIX4-202ENST00000554079 FAM236CP0DP71 79 aa7.15□□□□□ -1.27
SIX4-202ENST00000554079 TIRAPP58753 221 aa7.15□□□□□ -1.27
SIX4-202ENST00000554079 RPL39P62891 51 aaKnown RBP7.15□□□□□ -1.27
SIX4-202ENST00000554079 DAZ2Q13117 558 aaKnown RBP7.15□□□□□ -1.27
SIX4-202ENST00000554079 SPINK14Q6IE38 97 aa7.15□□□□□ -1.27
SIX4-202ENST00000554079 DAZ4Q86SG3 579 aaKnown RBP7.15□□□□□ -1.27
SIX4-202ENST00000554079 GPHB5Q86YW7 130 aa7.15□□□□□ -1.27
SIX4-202ENST00000554079 HES7Q9BYE0 225 aa7.15□□□□□ -1.27
SIX4-202ENST00000554079 DAZ1Q9NQZ3 744 aaKnown RBP7.15□□□□□ -1.27
SIX4-202ENST00000554079 DAZ3Q9NR90 486 aaKnown RBP7.15□□□□□ -1.27
SIX4-202ENST00000554079 DKK4Q9UBT3 224 aa7.15□□□□□ -1.27
SIX4-202ENST00000554079 NTN3O00634 580 aaPredicted RBP7.14□□□□□ -1.27
SIX4-202ENST00000554079 NDUFC2O95298 119 aa7.14□□□□□ -1.27
SIX4-202ENST00000554079 CCL3L1P16619 93 aa7.14□□□□□ -1.27
SIX4-202ENST00000554079 NBL1P41271 181 aa7.14□□□□□ -1.27
SIX4-202ENST00000554079 NPC2P61916 151 aa7.14□□□□□ -1.27
SIX4-202ENST00000554079 BEAN1Q3B7T3 259 aa7.14□□□□□ -1.27
SIX4-202ENST00000554079 C9orf139Q6ZV77 190 aa7.14□□□□□ -1.27
SIX4-202ENST00000554079 TMEM61Q8N0U2 210 aa7.14□□□□□ -1.27
SIX4-202ENST00000554079 TRAV12-2A0A075B6T6 113 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 KLRB1Q12918 225 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 Q6JHZ5 121 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 LINC01561Q8N1V8 128 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 TTTY12Q9BZ98 90 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 ZFAND3Q9H8U3 227 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 ZNF580Q9UK33 172 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 IGHV3-64A0A075B6Q5 118 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 TRGV5A0A0B4J1U4 118 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 IGHV3-72A0A0B4J1Y9 119 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 USP17L23D6RBM5 183 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 ENSAO43768 121 aaKnown RBP7.13□□□□□ -1.27
SIX4-202ENST00000554079 MIAQ16674 131 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 ADAMTSL4-AS1Q5T5F5 129 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 C1orf195Q5TG92 126 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 GFRALQ6UXV0 394 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 SERP1Q9Y6X1 66 aa7.13□□□□□ -1.27
SIX4-202ENST00000554079 DEFB108BQ8NET1 73 aa7.12□□□□□ -1.27
SIX4-202ENST00000554079 CFAP47Q6ZTR5 3102 aa7.12□□□□□ -1.27
SIX4-202ENST00000554079 A0A087WVE0 104 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 FAM223BA6NKX1 122 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 IGLV1-44P01699 117 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 FAM222AQ5U5X8 452 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 RNF7Q9UBF6 113 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 LY6G6EA0A0G2JKS1 128 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 F8W735 103 aaPredicted RBP7.11□□□□□ -1.27
SIX4-202ENST00000554079 M0R1W7 72 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 COX7A2LO14548 114 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 PPP1R17O96001 155 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 IGHV1-69P01742 117 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 MGPP08493 103 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 U3KQA8 63 aa7.11□□□□□ -1.27
SIX4-202ENST00000554079 IGHV1-18A0A0C4DH31 117 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 IGKV3D-7A0A0C4DH55 119 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 TMEM178BH3BS89 294 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 INAFM2P0DMQ5 153 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 POLR2KP53803 58 aaKnown RBP7.1□□□□□ -1.27
SIX4-202ENST00000554079 FP248Q71RG6 208 aaPredicted RBP7.1□□□□□ -1.27
SIX4-202ENST00000554079 FAM223AQ8IWN6 122 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 S4R3C0 116 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 FRYLO94915 3013 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 DMDP11532 3685 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 ADARB2-AS1A8MUL3 147 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 SPRY3O43610 288 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 RNF182Q8N6D2 247 aa7.1□□□□□ -1.27
SIX4-202ENST00000554079 FREM2Q5SZK8 3169 aa7.09□□□□□ -1.27
SIX4-202ENST00000554079 MUC4Q99102 2169 aa7.09□□□□□ -1.27
SIX4-202ENST00000554079 IGHV3-30-3P0DP02 117 aa7.09□□□□□ -1.27
SIX4-202ENST00000554079 PRR9Q5T870 116 aa7.09□□□□□ -1.27
SIX4-202ENST00000554079 WFDC11Q8NEX6 87 aa7.09□□□□□ -1.27
SIX4-202ENST00000554079 TMEM243Q9BU79 118 aa7.09□□□□□ -1.27
SIX4-202ENST00000554079 FAM186AA6NE01 2351 aa7.09□□□□□ -1.27
SIX4-202ENST00000554079 MUC6Q6W4X9 2439 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 TRAV12-3A0A0B4J271 114 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 BAALC-AS2P0C853 105 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 CDSNQ15517 529 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 MDS2Q8NDY4 140 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 SAP25Q8TEE9 199 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 C16orf92Q96LL3 132 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 IGHV4OR15-8A0A075B7B6 117 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 A0A087WW49 117 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.08□□□□□ -1.28
SIX4-202ENST00000554079 DEFB104AQ8WTQ1 72 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms