RNA–Protein interactions for RNA: ENST00000553991.1

AF111169.3-201, humanhuman

TSL 5 BASIC

Gene AF111169.3, Length 756 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF111169.3-201ENST00000553991 LINC00315P59091 139 aa8.69□□□□□ -1.02
AF111169.3-201ENST00000553991 BAGE2Q86Y30 109 aa8.69□□□□□ -1.02
AF111169.3-201ENST00000553991 MLST8Q9BVC4 326 aa8.69□□□□□ -1.02
AF111169.3-201ENST00000553991 RPL35P42766 123 aaKnown RBP8.68□□□□□ -1.02
AF111169.3-201ENST00000553991 MEF2BQ02080 365 aaPredicted RBP8.68□□□□□ -1.02
AF111169.3-201ENST00000553991 SLC25A29Q8N8R3 303 aa8.68□□□□□ -1.02
AF111169.3-201ENST00000553991 SMIM12Q96EX1 92 aa8.68□□□□□ -1.02
AF111169.3-201ENST00000553991 PARLQ9H300 379 aa8.68□□□□□ -1.02
AF111169.3-201ENST00000553991 PHLDA3Q9Y5J5 127 aa8.68□□□□□ -1.02
AF111169.3-201ENST00000553991 TRAV9-2A0A087WT02 112 aa8.67□□□□□ -1.02
AF111169.3-201ENST00000553991 ARMS2P0C7Q2 107 aa8.67□□□□□ -1.02
AF111169.3-201ENST00000553991 CCL20P78556 96 aa8.67□□□□□ -1.02
AF111169.3-201ENST00000553991 ZFP82Q8N141 532 aa8.67□□□□□ -1.02
AF111169.3-201ENST00000553991 NHLRC2Q8NBF2 726 aa8.67□□□□□ -1.02
AF111169.3-201ENST00000553991 BCL2P10415 239 aa8.66□□□□□ -1.02
AF111169.3-201ENST00000553991 LY96Q9Y6Y9 160 aa8.66□□□□□ -1.02
AF111169.3-201ENST00000553991 LOC100131303A0A0U1RQF7 123 aa8.65□□□□□ -1.02
AF111169.3-201ENST00000553991 GRIFINA4D1Z8 144 aa8.65□□□□□ -1.02
AF111169.3-201ENST00000553991 CENPWQ5EE01 88 aa8.65□□□□□ -1.02
AF111169.3-201ENST00000553991 VAX2Q9UIW0 290 aa8.65□□□□□ -1.02
AF111169.3-201ENST00000553991 PLA2G2DQ9UNK4 145 aa8.65□□□□□ -1.02
AF111169.3-201ENST00000553991 TMSB15BA0A087X1C1 80 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 IGHV3-73A0A0B4J1V6 119 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 DNAH10OSP0CZ25 163 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 EVI2AP22794 236 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 GCSHP23434 173 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 BLOC1S1P78537 153 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 DMRTA1Q5VZB9 504 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 PRR27Q6MZM9 219 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 UFSP1Q6NVU6 142 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 NFE4Q86UQ8 179 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 C10orf126Q8N4M7 172 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 SFRP2Q96HF1 295 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 BIN3Q9NQY0 253 aa8.64□□□□□ -1.03
AF111169.3-201ENST00000553991 TRAV8-6A0A0B4J262 113 aa8.63□□□□□ -1.03
AF111169.3-201ENST00000553991 M0R381 172 aa8.63□□□□□ -1.03
AF111169.3-201ENST00000553991 OR5AL1P0C617 328 aa8.63□□□□□ -1.03
AF111169.3-201ENST00000553991 GNG4P50150 75 aa8.63□□□□□ -1.03
AF111169.3-201ENST00000553991 WFDC10BQ8IUB3 73 aa8.63□□□□□ -1.03
AF111169.3-201ENST00000553991 DERL1Q9BUN8 251 aa8.63□□□□□ -1.03
AF111169.3-201ENST00000553991 A0A087WTM6 91 aa8.62□□□□□ -1.03
AF111169.3-201ENST00000553991 SNAI2O43623 268 aa8.62□□□□□ -1.03
AF111169.3-201ENST00000553991 LINC00694P0DN24 101 aa8.62□□□□□ -1.03
AF111169.3-201ENST00000553991 RPS20P60866 119 aaKnown RBP8.62□□□□□ -1.03
AF111169.3-201ENST00000553991 HAMPP81172 84 aa8.62□□□□□ -1.03
AF111169.3-201ENST00000553991 LELP1Q5T871 98 aa8.62□□□□□ -1.03
AF111169.3-201ENST00000553991 ATP6V0E2Q8NHE4 81 aa8.62□□□□□ -1.03
AF111169.3-201ENST00000553991 TMEM70Q9BUB7 260 aa8.62□□□□□ -1.03
AF111169.3-201ENST00000553991 GTSF1LQ9H1H1 148 aa8.62□□□□□ -1.03
AF111169.3-201ENST00000553991 MED9Q9NWA0 146 aa8.62□□□□□ -1.03
AF111169.3-201ENST00000553991 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
AF111169.3-201ENST00000553991 TRBV10-1A0A0K0K1A3 114 aa8.61□□□□□ -1.03
AF111169.3-201ENST00000553991 XKRY2A2RUG3 117 aa8.61□□□□□ -1.03
AF111169.3-201ENST00000553991 RPL19P84098 196 aaKnown RBP8.61□□□□□ -1.03
AF111169.3-201ENST00000553991 LINC01556Q5JQF7 62 aa8.61□□□□□ -1.03
AF111169.3-201ENST00000553991 FAM74A4Q5TZK3 123 aa8.61□□□□□ -1.03
AF111169.3-201ENST00000553991 ALKAL2Q6UX46 152 aa8.61□□□□□ -1.03
AF111169.3-201ENST00000553991 DAZAP1Q96EP5 407 aaKnown RBP8.61□□□□□ -1.03
AF111169.3-201ENST00000553991 SSBP4Q9BWG4 385 aaPredicted RBP8.61□□□□□ -1.03
AF111169.3-201ENST00000553991 A0A087WWC5 75 aa8.6□□□□□ -1.03
AF111169.3-201ENST00000553991 PLA2G1BP04054 148 aaKnown RBP8.6□□□□□ -1.03
AF111169.3-201ENST00000553991 OR10J3Q5JRS4 329 aa8.6□□□□□ -1.03
AF111169.3-201ENST00000553991 OR10AG1Q8NH19 301 aa8.6□□□□□ -1.03
AF111169.3-201ENST00000553991 DEFB104AQ8WTQ1 72 aa8.6□□□□□ -1.03
AF111169.3-201ENST00000553991 SAMD10Q9BYL1 202 aa8.6□□□□□ -1.03
AF111169.3-201ENST00000553991 JPT2Q9H910 190 aa8.6□□□□□ -1.03
AF111169.3-201ENST00000553991 LRP1Q07954 4544 aaKnown RBP8.6□□□□□ -1.03
AF111169.3-201ENST00000553991 A0A087WWL8 130 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 C19orf71A6NCJ1 209 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 GAGE12JA6NER3 117 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 TMEM250H0YL14 139 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 IGLV2-8P01709 118 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 P01737 135 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 CRYGDP07320 174 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 GAGE1Q13065 139 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 GAGE4Q13068 117 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 GAGE5Q13069 117 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 GAGE13Q4V321 117 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 SPANXN1Q5VSR9 72 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 LYPD6BQ8NI32 183 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 AP1S3Q96PC3 154 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 MSRB1Q9NZV6 116 aa8.59□□□□□ -1.03
AF111169.3-201ENST00000553991 TRBV20OR9-2A0A075B6H5 130 aa8.58□□□□□ -1.04
AF111169.3-201ENST00000553991 RAB19A4D1S5 217 aa8.58□□□□□ -1.04
AF111169.3-201ENST00000553991 NDUFS6O75380 124 aaKnown RBP8.58□□□□□ -1.04
AF111169.3-201ENST00000553991 RAB4BP61018 213 aa8.58□□□□□ -1.04
AF111169.3-201ENST00000553991 C14orf178Q8N769 122 aaPredicted RBP8.58□□□□□ -1.04
AF111169.3-201ENST00000553991 OR2D3Q8NGH3 330 aa8.58□□□□□ -1.04
AF111169.3-201ENST00000553991 RNF213Q63HN8 5207 aa8.58□□□□□ -1.04
AF111169.3-201ENST00000553991 A0A1B0GVG6 124 aa8.57□□□□□ -1.04
AF111169.3-201ENST00000553991 RBFOX3A6NFN3 312 aa8.57□□□□□ -1.04
AF111169.3-201ENST00000553991 F2Z2F3 143 aa8.57□□□□□ -1.04
AF111169.3-201ENST00000553991 IGLC6P0CF74 106 aa8.57□□□□□ -1.04
AF111169.3-201ENST00000553991 SMIM17P0DL12 118 aa8.57□□□□□ -1.04
AF111169.3-201ENST00000553991 CACNG7P62955 275 aa8.57□□□□□ -1.04
AF111169.3-201ENST00000553991 RPL36AP83881 106 aaKnown RBP8.57□□□□□ -1.04
AF111169.3-201ENST00000553991 LAGE3Q14657 143 aa8.57□□□□□ -1.04
AF111169.3-201ENST00000553991 FER1L6-AS1Q8NA97 138 aa8.57□□□□□ -1.04
AF111169.3-201ENST00000553991 RPL36ALQ969Q0 106 aaKnown RBP8.57□□□□□ -1.04
AF111169.3-201ENST00000553991 NKX2-5P52952 324 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms