RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 RAB5BP61020 215 aa10.43□□□□□ -0.74
SHMT2-208ENST00000553868 SSTP61278 116 aa10.43□□□□□ -0.74
SHMT2-208ENST00000553868 FABP9Q0Z7S8 132 aa10.43□□□□□ -0.74
SHMT2-208ENST00000553868 RRN3P1Q2M238 152 aa10.43□□□□□ -0.74
SHMT2-208ENST00000553868 IL17DQ8TAD2 202 aa10.43□□□□□ -0.74
SHMT2-208ENST00000553868 TMEM263Q8WUH6 116 aaKnown RBP10.43□□□□□ -0.74
SHMT2-208ENST00000553868 C16orf74Q96GX8 76 aa10.43□□□□□ -0.74
SHMT2-208ENST00000553868 PIK3CD-AS1Q5SR53 167 aa10.42□□□□□ -0.74
SHMT2-208ENST00000553868 PTH2Q96A98 100 aa10.42□□□□□ -0.74
SHMT2-208ENST00000553868 AP1S3Q96PC3 154 aa10.42□□□□□ -0.74
SHMT2-208ENST00000553868 TMEM191AQ9H0A3 160 aa10.42□□□□□ -0.74
SHMT2-208ENST00000553868 FAT2Q9NYQ8 4349 aa10.42□□□□□ -0.74
SHMT2-208ENST00000553868 DNAH2Q9P225 4427 aa10.42□□□□□ -0.74
SHMT2-208ENST00000553868 M0R2P5 195 aa10.41□□□□□ -0.74
SHMT2-208ENST00000553868 Q6ZWC4 215 aa10.41□□□□□ -0.74
SHMT2-208ENST00000553868 NDUFAF3Q9BU61 184 aa10.41□□□□□ -0.74
SHMT2-208ENST00000553868 GSN-AS1Q9NRJ2 163 aa10.41□□□□□ -0.74
SHMT2-208ENST00000553868 DNAH11Q96DT5 4516 aa10.41□□□□□ -0.74
SHMT2-208ENST00000553868 SMIM17P0DL12 118 aa10.4□□□□□ -0.74
SHMT2-208ENST00000553868 C11orf72Q8NBR9 251 aa10.4□□□□□ -0.74
SHMT2-208ENST00000553868 RNASE8Q8TDE3 154 aaKnown RBP10.4□□□□□ -0.74
SHMT2-208ENST00000553868 MSRB1Q9NZV6 116 aa10.4□□□□□ -0.74
SHMT2-208ENST00000553868 ZNF876PQ49A33 203 aa10.39□□□□□ -0.75
SHMT2-208ENST00000553868 DMRTA1Q5VZB9 504 aa10.39□□□□□ -0.75
SHMT2-208ENST00000553868 FAM104BQ5XKR9 115 aa10.39□□□□□ -0.75
SHMT2-208ENST00000553868 DPH3P1Q9H4G8 78 aa10.39□□□□□ -0.75
SHMT2-208ENST00000553868 TMA7Q9Y2S6 64 aaKnown RBP10.39□□□□□ -0.75
SHMT2-208ENST00000553868 AZU1P20160 251 aa10.38□□□□□ -0.75
SHMT2-208ENST00000553868 SLAQ13239 276 aa10.38□□□□□ -0.75
SHMT2-208ENST00000553868 DEFB135Q30KP9 77 aa10.38□□□□□ -0.75
SHMT2-208ENST00000553868 A8MWV9 139 aa10.37□□□□□ -0.75
SHMT2-208ENST00000553868 PPBPP02775 128 aa10.37□□□□□ -0.75
SHMT2-208ENST00000553868 DAZ2Q13117 558 aaKnown RBP10.37□□□□□ -0.75
SHMT2-208ENST00000553868 LGALS9BQ3B8N2 356 aa10.37□□□□□ -0.75
SHMT2-208ENST00000553868 RNF183Q96D59 192 aa10.37□□□□□ -0.75
SHMT2-208ENST00000553868 TP53TG1Q9Y2A0 90 aa10.37□□□□□ -0.75
SHMT2-208ENST00000553868 PHOX2AO14813 284 aa10.36□□□□□ -0.75
SHMT2-208ENST00000553868 SPRY2O43597 315 aa10.36□□□□□ -0.75
SHMT2-208ENST00000553868 PRM2P04554 102 aa10.36□□□□□ -0.75
SHMT2-208ENST00000553868 MIFP14174 115 aa10.36□□□□□ -0.75
SHMT2-208ENST00000553868 EVI2AP22794 236 aa10.36□□□□□ -0.75
SHMT2-208ENST00000553868 AMN1Q8IY45 258 aa10.36□□□□□ -0.75
SHMT2-208ENST00000553868 OR11H2Q8NH07 326 aa10.36□□□□□ -0.75
SHMT2-208ENST00000553868 HSPG2P98160 4391 aa10.35□□□□□ -0.75
SHMT2-208ENST00000553868 S100A6P06703 90 aa10.35□□□□□ -0.75
SHMT2-208ENST00000553868 KIAA1644Q3SXP7 199 aa10.35□□□□□ -0.75
SHMT2-208ENST00000553868 ORMDL3Q8N138 153 aa10.35□□□□□ -0.75
SHMT2-208ENST00000553868 C14orf178Q8N769 122 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-208ENST00000553868 RASL10AQ92737 203 aa10.35□□□□□ -0.75
SHMT2-208ENST00000553868 MRAP2Q96G30 205 aa10.35□□□□□ -0.75
SHMT2-208ENST00000553868 X6R8D5 127 aa10.35□□□□□ -0.75
SHMT2-208ENST00000553868 TRGV1A0A0A0MS02 117 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 RHODO00212 210 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST1H2BKO60814 126 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST1H2BJP06899 126 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 RAB4AP20338 218 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST1H2BOP23527 126 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 SRIP30626 198 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 CKS2P33552 79 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST1H2BBP33778 126 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST1H2BDP58876 126 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST1H2BCP62807 126 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST2H2BEQ16778 126 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 MRPL51Q4U2R6 128 aaKnown RBP10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST1H2BHQ93079 126 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST1H2BNQ99877 126 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 HIST1H2BMQ99879 126 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 OVOL2Q9BRP0 275 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 MRPL16Q9NX20 251 aaKnown RBP10.34□□□□□ -0.75
SHMT2-208ENST00000553868 LAMTOR2Q9Y2Q5 125 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 DNAH6Q9C0G6 4158 aa10.34□□□□□ -0.75
SHMT2-208ENST00000553868 MGPP08493 103 aa10.33□□□□□ -0.76
SHMT2-208ENST00000553868 RNF185Q96GF1 192 aa10.33□□□□□ -0.76
SHMT2-208ENST00000553868 ALKBH7Q9BT30 221 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-208ENST00000553868 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
SHMT2-208ENST00000553868 DNAH17Q9UFH2 4485 aa10.33□□□□□ -0.76
SHMT2-208ENST00000553868 PLAC8L1A1L4L8 177 aa10.32□□□□□ -0.76
SHMT2-208ENST00000553868 CIDEAO60543 219 aa10.32□□□□□ -0.76
SHMT2-208ENST00000553868 PPP1R17O96001 155 aa10.32□□□□□ -0.76
SHMT2-208ENST00000553868 OR10J3Q5JRS4 329 aa10.32□□□□□ -0.76
SHMT2-208ENST00000553868 PRELID3AQ96N28 172 aa10.32□□□□□ -0.76
SHMT2-208ENST00000553868 KIF25-AS1Q9Y6Z4 181 aa10.32□□□□□ -0.76
SHMT2-208ENST00000553868 A0A087WWL8 130 aa10.31□□□□□ -0.76
SHMT2-208ENST00000553868 LYRM9A8MSI8 78 aa10.31□□□□□ -0.76
SHMT2-208ENST00000553868 D6R8Y8 96 aa10.31□□□□□ -0.76
SHMT2-208ENST00000553868 F5H697 171 aa10.31□□□□□ -0.76
SHMT2-208ENST00000553868 RS1O15537 224 aa10.31□□□□□ -0.76
SHMT2-208ENST00000553868 FAM74A4Q5TZK3 123 aa10.31□□□□□ -0.76
SHMT2-208ENST00000553868 POM121L12Q8N7R1 296 aa10.31□□□□□ -0.76
SHMT2-208ENST00000553868 IGHV4-28A0A0C4DH34 117 aa10.3□□□□□ -0.76
SHMT2-208ENST00000553868 TEX48A0A1B0GUV7 120 aa10.3□□□□□ -0.76
SHMT2-208ENST00000553868 H7C1H1 209 aa10.3□□□□□ -0.76
SHMT2-208ENST00000553868 CRYGDP07320 174 aa10.3□□□□□ -0.76
SHMT2-208ENST00000553868 EMP1P54849 157 aa10.3□□□□□ -0.76
SHMT2-208ENST00000553868 NDUFA6P56556 154 aa10.3□□□□□ -0.76
SHMT2-208ENST00000553868 Q0VG73 95 aa10.3□□□□□ -0.76
SHMT2-208ENST00000553868 ZNF56Q15929 161 aa10.3□□□□□ -0.76
SHMT2-208ENST00000553868 ZFP2Q6ZN57 461 aa10.3□□□□□ -0.76
SHMT2-208ENST00000553868 OR4C5Q8NGB2 326 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms