RNA–Protein interactions for RNA: ENST00000553801.1

SYNE2-211, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-211ENST00000553801 S100ZQ8WXG8 99 aa11.47□□□□□ -0.57
SYNE2-211ENST00000553801 RPL36ALQ969Q0 106 aaKnown RBP11.47□□□□□ -0.57
SYNE2-211ENST00000553801 DAZAP1Q96EP5 407 aaKnown RBP11.47□□□□□ -0.57
SYNE2-211ENST00000553801 CXorf1O96002 111 aa11.46□□□□□ -0.57
SYNE2-211ENST00000553801 MBP02144 154 aa11.46□□□□□ -0.57
SYNE2-211ENST00000553801 ARMS2P0C7Q2 107 aa11.46□□□□□ -0.57
SYNE2-211ENST00000553801 DNLZQ5SXM8 178 aa11.46□□□□□ -0.57
SYNE2-211ENST00000553801 ARL2-SNX15V9GYD0 113 aa11.46□□□□□ -0.57
SYNE2-211ENST00000553801 HNRNPA3P51991 378 aaKnown RBP11.45□□□□□ -0.58
SYNE2-211ENST00000553801 DGAT2L7PQ6IED9 249 aa11.45□□□□□ -0.58
SYNE2-211ENST00000553801 SFRP2Q96HF1 295 aa11.45□□□□□ -0.58
SYNE2-211ENST00000553801 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
SYNE2-211ENST00000553801 TRBV7-3A0A075B6L6 115 aa11.44□□□□□ -0.58
SYNE2-211ENST00000553801 A0A087WWL8 130 aa11.44□□□□□ -0.58
SYNE2-211ENST00000553801 TRAV34A0A0B4J273 112 aa11.44□□□□□ -0.58
SYNE2-211ENST00000553801 A0A1W2PRE2 83 aa11.44□□□□□ -0.58
SYNE2-211ENST00000553801 UBE2D3P61077 147 aa11.44□□□□□ -0.58
SYNE2-211ENST00000553801 UBE2D2P62837 147 aa11.44□□□□□ -0.58
SYNE2-211ENST00000553801 ENHOQ6UWT2 76 aa11.44□□□□□ -0.58
SYNE2-211ENST00000553801 HSD17B11Q8NBQ5 300 aa11.44□□□□□ -0.58
SYNE2-211ENST00000553801 PSMG3Q9BT73 122 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-211ENST00000553801 ACTR3CQ9C0K3 210 aaPredicted RBP11.44□□□□□ -0.58
SYNE2-211ENST00000553801 KRBOX1C9JBD0 128 aa11.43□□□□□ -0.58
SYNE2-211ENST00000553801 USP17L23D6RBM5 183 aa11.43□□□□□ -0.58
SYNE2-211ENST00000553801 IFNA7P01567 189 aa11.43□□□□□ -0.58
SYNE2-211ENST00000553801 TPT1P13693 172 aaKnown RBP11.43□□□□□ -0.58
SYNE2-211ENST00000553801 SERF2P84101 59 aa11.43□□□□□ -0.58
SYNE2-211ENST00000553801 C15orf54Q8N8G6 183 aa11.43□□□□□ -0.58
SYNE2-211ENST00000553801 MARVELD1Q9BSK0 173 aa11.43□□□□□ -0.58
SYNE2-211ENST00000553801 TRBV6-8A0A0A6YYG3 113 aa11.42□□□□□ -0.58
SYNE2-211ENST00000553801 UPK1BO75841 260 aa11.42□□□□□ -0.58
SYNE2-211ENST00000553801 PKIAP61925 76 aa11.42□□□□□ -0.58
SYNE2-211ENST00000553801 Q6ZRU5 148 aa11.42□□□□□ -0.58
SYNE2-211ENST00000553801 C9orf163Q8N9P6 203 aa11.42□□□□□ -0.58
SYNE2-211ENST00000553801 ZC2HC1AQ96GY0 325 aa11.42□□□□□ -0.58
SYNE2-211ENST00000553801 A0A0D9SG52 128 aa11.41□□□□□ -0.58
SYNE2-211ENST00000553801 GRIFINA4D1Z8 144 aa11.41□□□□□ -0.58
SYNE2-211ENST00000553801 M0R036 132 aa11.41□□□□□ -0.58
SYNE2-211ENST00000553801 M0R381 172 aa11.41□□□□□ -0.58
SYNE2-211ENST00000553801 HLA-DQA1P01909 254 aa11.41□□□□□ -0.58
SYNE2-211ENST00000553801 ANGP03950 147 aaKnown RBP11.41□□□□□ -0.58
SYNE2-211ENST00000553801 PRSS1P07477 247 aa11.41□□□□□ -0.58
SYNE2-211ENST00000553801 ATP6V0CP27449 155 aa11.41□□□□□ -0.58
SYNE2-211ENST00000553801 MIAQ16674 131 aa11.41□□□□□ -0.58
SYNE2-211ENST00000553801 ZFP82Q8N141 532 aa11.41□□□□□ -0.58
SYNE2-211ENST00000553801 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.41□□□□□ -0.58
SYNE2-211ENST00000553801 TNFSF18Q9UNG2 199 aa11.41□□□□□ -0.58
SYNE2-211ENST00000553801 MT1HL1P0DM35 61 aa11.4□□□□□ -0.58
SYNE2-211ENST00000553801 RPL19P84098 196 aaKnown RBP11.4□□□□□ -0.58
SYNE2-211ENST00000553801 Q86TA4 180 aa11.4□□□□□ -0.58
SYNE2-211ENST00000553801 OR10G8Q8NGN5 311 aa11.4□□□□□ -0.58
SYNE2-211ENST00000553801 ZFP30Q9Y2G7 519 aa11.4□□□□□ -0.58
SYNE2-211ENST00000553801 PEX7O00628 323 aa11.39□□□□□ -0.59
SYNE2-211ENST00000553801 SH2D1AO60880 128 aa11.39□□□□□ -0.59
SYNE2-211ENST00000553801 CRIP1P50238 77 aa11.39□□□□□ -0.59
SYNE2-211ENST00000553801 MPV17L2Q567V2 206 aa11.39□□□□□ -0.59
SYNE2-211ENST00000553801 FAM162BQ5T6X4 162 aa11.39□□□□□ -0.59
SYNE2-211ENST00000553801 HIST1H2BAQ96A08 127 aa11.39□□□□□ -0.59
SYNE2-211ENST00000553801 NKX6-2Q9C056 277 aaPredicted RBP11.39□□□□□ -0.59
SYNE2-211ENST00000553801 RAB4BP61018 213 aa11.38□□□□□ -0.59
SYNE2-211ENST00000553801 COX8CQ7Z4L0 72 aa11.38□□□□□ -0.59
SYNE2-211ENST00000553801 CHCHD5Q9BSY4 110 aa11.38□□□□□ -0.59
SYNE2-211ENST00000553801 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.38□□□□□ -0.59
SYNE2-211ENST00000553801 PTTG1O95997 202 aa11.37□□□□□ -0.59
SYNE2-211ENST00000553801 UBE2G2P60604 165 aa11.36□□□□□ -0.59
SYNE2-211ENST00000553801 IFITM3Q01628 133 aa11.36□□□□□ -0.59
SYNE2-211ENST00000553801 LINC01559Q495D7 138 aa11.36□□□□□ -0.59
SYNE2-211ENST00000553801 TMEM97Q5BJF2 176 aa11.36□□□□□ -0.59
SYNE2-211ENST00000553801 SDIM1Q6ZPB5 146 aa11.36□□□□□ -0.59
SYNE2-211ENST00000553801 CLRN3Q8NCR9 226 aa11.36□□□□□ -0.59
SYNE2-211ENST00000553801 TMSB15BA0A087X1C1 80 aa11.35□□□□□ -0.59
SYNE2-211ENST00000553801 ZNF56Q15929 161 aa11.35□□□□□ -0.59
SYNE2-211ENST00000553801 ZNF674Q2M3X9 581 aa11.35□□□□□ -0.59
SYNE2-211ENST00000553801 NEXN-AS1Q8NBZ9 246 aa11.35□□□□□ -0.59
SYNE2-211ENST00000553801 FMC1Q96HJ9 113 aa11.35□□□□□ -0.59
SYNE2-211ENST00000553801 AQP10Q96PS8 301 aa11.35□□□□□ -0.59
SYNE2-211ENST00000553801 CTXND1A0A1B0GTU2 59 aa11.34□□□□□ -0.59
SYNE2-211ENST00000553801 DEFA1P59665 94 aa11.34□□□□□ -0.59
SYNE2-211ENST00000553801 DEFA3P59666 94 aa11.34□□□□□ -0.59
SYNE2-211ENST00000553801 UBE2G1P62253 170 aa11.34□□□□□ -0.59
SYNE2-211ENST00000553801 PRR34Q9NV39 138 aa11.34□□□□□ -0.59
SYNE2-211ENST00000553801 FAM74A7A6NL05 159 aa11.33□□□□□ -0.6
SYNE2-211ENST00000553801 PANO1I0J062 215 aa11.33□□□□□ -0.6
SYNE2-211ENST00000553801 PRR27Q6MZM9 219 aa11.33□□□□□ -0.6
SYNE2-211ENST00000553801 DPH3Q96FX2 82 aa11.33□□□□□ -0.6
SYNE2-211ENST00000553801 A6NHS1 94 aa11.32□□□□□ -0.6
SYNE2-211ENST00000553801 CIRBPQ14011 172 aaKnown RBP11.32□□□□□ -0.6
SYNE2-211ENST00000553801 LINC00269Q8N2A0 174 aa11.32□□□□□ -0.6
SYNE2-211ENST00000553801 DPH3P1Q9H4G8 78 aa11.32□□□□□ -0.6
SYNE2-211ENST00000553801 TRBV6-1A0A0K0K1D8 114 aa11.31□□□□□ -0.6
SYNE2-211ENST00000553801 CNBPP62633 177 aaKnown RBP11.31□□□□□ -0.6
SYNE2-211ENST00000553801 RBX1P62877 108 aa11.31□□□□□ -0.6
SYNE2-211ENST00000553801 ZNF726P1Q15940 193 aa11.31□□□□□ -0.6
SYNE2-211ENST00000553801 KRTAP26-1Q6PEX3 210 aa11.31□□□□□ -0.6
SYNE2-211ENST00000553801 CLPSL2Q6UWE3 100 aa11.31□□□□□ -0.6
SYNE2-211ENST00000553801 RNF185Q96GF1 192 aa11.31□□□□□ -0.6
SYNE2-211ENST00000553801 ZNF471Q9BX82 626 aaPredicted RBP11.31□□□□□ -0.6
SYNE2-211ENST00000553801 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
SYNE2-211ENST00000553801 TRBV25-1A0A075B6N4 114 aa11.29□□□□□ -0.6
SYNE2-211ENST00000553801 IGHV3-64A0A075B6Q5 118 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms