RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 LINC00315P59091 139 aa12.67□□□□□ -0.38
PSEN1-208ENST00000553719 IMMP2LQ96T52 175 aa12.67□□□□□ -0.38
PSEN1-208ENST00000553719 AP1S3Q96PC3 154 aa12.66□□□□□ -0.38
PSEN1-208ENST00000553719 RHODO00212 210 aa12.65□□□□□ -0.38
PSEN1-208ENST00000553719 GATA1P15976 413 aaPredicted RBP12.65□□□□□ -0.38
PSEN1-208ENST00000553719 SSTP61278 116 aa12.65□□□□□ -0.38
PSEN1-208ENST00000553719 CEMP1Q6PRD7 247 aaPredicted RBP12.65□□□□□ -0.38
PSEN1-208ENST00000553719 ATRAIDQ6UW56 229 aa12.65□□□□□ -0.38
PSEN1-208ENST00000553719 A0A087WWL8 130 aa12.64□□□□□ -0.39
PSEN1-208ENST00000553719 A0A1B0GXF2 115 aa12.64□□□□□ -0.39
PSEN1-208ENST00000553719 F5H768 121 aa12.64□□□□□ -0.39
PSEN1-208ENST00000553719 HTN3P15516 51 aa12.64□□□□□ -0.39
PSEN1-208ENST00000553719 FAM3BP58499 235 aaPredicted RBP12.64□□□□□ -0.39
PSEN1-208ENST00000553719 TWIST1Q15672 202 aa12.64□□□□□ -0.39
PSEN1-208ENST00000553719 C14orf178Q8N769 122 aaPredicted RBP12.64□□□□□ -0.39
PSEN1-208ENST00000553719 RPS10P5Q9NQ39 176 aa12.64□□□□□ -0.39
PSEN1-208ENST00000553719 NUPR2A6NF83 97 aa12.63□□□□□ -0.39
PSEN1-208ENST00000553719 TRGC1P0CF51 173 aa12.63□□□□□ -0.39
PSEN1-208ENST00000553719 EVI2AP22794 236 aa12.63□□□□□ -0.39
PSEN1-208ENST00000553719 Q6ZSN1 163 aa12.63□□□□□ -0.39
PSEN1-208ENST00000553719 BORCS7Q96B45 105 aa12.63□□□□□ -0.39
PSEN1-208ENST00000553719 VSIG2Q96IQ7 327 aa12.63□□□□□ -0.39
PSEN1-208ENST00000553719 VPS13DQ5THJ4 4388 aa12.63□□□□□ -0.39
PSEN1-208ENST00000553719 DNAH1Q9P2D7 4330 aa12.63□□□□□ -0.39
PSEN1-208ENST00000553719 TENM2Q9NT68 2774 aa12.62□□□□□ -0.39
PSEN1-208ENST00000553719 CRYBA4P53673 196 aa12.62□□□□□ -0.39
PSEN1-208ENST00000553719 FAM74A4Q5TZK3 123 aa12.62□□□□□ -0.39
PSEN1-208ENST00000553719 ATP5L2Q7Z4Y8 100 aa12.62□□□□□ -0.39
PSEN1-208ENST00000553719 GATD1Q8NB37 220 aa12.62□□□□□ -0.39
PSEN1-208ENST00000553719 FAM210BQ96KR6 192 aa12.62□□□□□ -0.39
PSEN1-208ENST00000553719 LYSTQ99698 3801 aa12.62□□□□□ -0.39
PSEN1-208ENST00000553719 TRAV9-1A0A075B6T8 112 aa12.61□□□□□ -0.39
PSEN1-208ENST00000553719 IGHV3-73A0A0B4J1V6 119 aa12.61□□□□□ -0.39
PSEN1-208ENST00000553719 C3orf84H3BNL1 204 aa12.61□□□□□ -0.39
PSEN1-208ENST00000553719 RIGQ13278 110 aa12.61□□□□□ -0.39
PSEN1-208ENST00000553719 TMEM88Q6PEY1 159 aa12.61□□□□□ -0.39
PSEN1-208ENST00000553719 PRO0255Q9UI72 69 aa12.61□□□□□ -0.39
PSEN1-208ENST00000553719 HHLA3Q9XRX5 114 aa12.61□□□□□ -0.39
PSEN1-208ENST00000553719 TRAV26-1A0A087WT03 109 aa12.6□□□□□ -0.39
PSEN1-208ENST00000553719 TRGV4A0A0C4DH28 118 aa12.6□□□□□ -0.39
PSEN1-208ENST00000553719 A0A1B0GW15 77 aa12.6□□□□□ -0.39
PSEN1-208ENST00000553719 TRBV6-4A0A1B0GX49 114 aa12.6□□□□□ -0.39
PSEN1-208ENST00000553719 H3BNG1 76 aa12.6□□□□□ -0.39
PSEN1-208ENST00000553719 SLAQ13239 276 aa12.6□□□□□ -0.39
PSEN1-208ENST00000553719 ZFAND6Q6FIF0 208 aa12.6□□□□□ -0.39
PSEN1-208ENST00000553719 MRPL54Q6P161 138 aaKnown RBP12.6□□□□□ -0.39
PSEN1-208ENST00000553719 SLC25A29Q8N8R3 303 aa12.6□□□□□ -0.39
PSEN1-208ENST00000553719 TMEM191AQ9H0A3 160 aa12.6□□□□□ -0.39
PSEN1-208ENST00000553719 DPH3P1Q9H4G8 78 aa12.6□□□□□ -0.39
PSEN1-208ENST00000553719 ALMS1Q8TCU4 4167 aa12.59□□□□□ -0.39
PSEN1-208ENST00000553719 HBBP68871 147 aa12.59□□□□□ -0.39
PSEN1-208ENST00000553719 CASC10Q5T4H9 136 aa12.59□□□□□ -0.39
PSEN1-208ENST00000553719 KCNIP4Q6PIL6 250 aa12.59□□□□□ -0.39
PSEN1-208ENST00000553719 BTF3L4Q96K17 158 aa12.59□□□□□ -0.39
PSEN1-208ENST00000553719 SMIM17P0DL12 118 aa12.58□□□□□ -0.4
PSEN1-208ENST00000553719 RAB4BP61018 213 aa12.58□□□□□ -0.4
PSEN1-208ENST00000553719 SACSQ9NZJ4 4579 aa12.57□□□□□ -0.4
PSEN1-208ENST00000553719 A0A0J9YY99 117 aa12.57□□□□□ -0.4
PSEN1-208ENST00000553719 K7EQD1 137 aa12.57□□□□□ -0.4
PSEN1-208ENST00000553719 LINC00694P0DN24 101 aa12.57□□□□□ -0.4
PSEN1-208ENST00000553719 ZNF56Q15929 161 aa12.57□□□□□ -0.4
PSEN1-208ENST00000553719 RNF185Q96GF1 192 aa12.57□□□□□ -0.4
PSEN1-208ENST00000553719 YPEL4Q96NS1 127 aa12.57□□□□□ -0.4
PSEN1-208ENST00000553719 KLK5Q9Y337 293 aaPredicted RBP12.57□□□□□ -0.4
PSEN1-208ENST00000553719 URGCP-MRPS24S4R325 110 aa12.57□□□□□ -0.4
PSEN1-208ENST00000553719 IGLL5B9A064 214 aa12.56□□□□□ -0.4
PSEN1-208ENST00000553719 PAX4O43316 350 aa12.56□□□□□ -0.4
PSEN1-208ENST00000553719 CAMPP49913 170 aa12.56□□□□□ -0.4
PSEN1-208ENST00000553719 RHOHQ15669 191 aa12.56□□□□□ -0.4
PSEN1-208ENST00000553719 SUMO4Q6EEV6 95 aa12.56□□□□□ -0.4
PSEN1-208ENST00000553719 Q9UF83 564 aa12.56□□□□□ -0.4
PSEN1-208ENST00000553719 APLNQ9ULZ1 77 aa12.56□□□□□ -0.4
PSEN1-208ENST00000553719 LOC100131303A0A0U1RQF7 123 aa12.55□□□□□ -0.4
PSEN1-208ENST00000553719 ATP6V1G1O75348 118 aa12.55□□□□□ -0.4
PSEN1-208ENST00000553719 S100A8P05109 93 aa12.55□□□□□ -0.4
PSEN1-208ENST00000553719 MGPP08493 103 aa12.55□□□□□ -0.4
PSEN1-208ENST00000553719 S100PP25815 95 aa12.55□□□□□ -0.4
PSEN1-208ENST00000553719 TCTAP57738 103 aa12.55□□□□□ -0.4
PSEN1-208ENST00000553719 ELOBQ15370 118 aa12.55□□□□□ -0.4
PSEN1-208ENST00000553719 RASL11AQ6T310 242 aa12.55□□□□□ -0.4
PSEN1-208ENST00000553719 SMIM15Q7Z3B0 74 aa12.55□□□□□ -0.4
PSEN1-208ENST00000553719 C15orf53Q8NAA6 179 aa12.55□□□□□ -0.4
PSEN1-208ENST00000553719 M0QY20 66 aa12.54□□□□□ -0.4
PSEN1-208ENST00000553719 RAB4AP20338 218 aa12.54□□□□□ -0.4
PSEN1-208ENST00000553719 FAM104BQ5XKR9 115 aa12.54□□□□□ -0.4
PSEN1-208ENST00000553719 AMN1Q8IY45 258 aa12.54□□□□□ -0.4
PSEN1-208ENST00000553719 TRBV24-1A0A075B6N3 115 aa12.53□□□□□ -0.4
PSEN1-208ENST00000553719 A0A096LPF7 62 aa12.53□□□□□ -0.4
PSEN1-208ENST00000553719 TRBV10-1A0A0K0K1A3 114 aa12.53□□□□□ -0.4
PSEN1-208ENST00000553719 P0DMU3 169 aa12.53□□□□□ -0.4
PSEN1-208ENST00000553719 FAM231AP0DMU4 169 aa12.53□□□□□ -0.4
PSEN1-208ENST00000553719 FAM231CP0DMU5 169 aa12.53□□□□□ -0.4
PSEN1-208ENST00000553719 GYPEP15421 78 aa12.53□□□□□ -0.4
PSEN1-208ENST00000553719 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
PSEN1-208ENST00000553719 FRZBQ92765 325 aa12.53□□□□□ -0.4
PSEN1-208ENST00000553719 F5H697 171 aa12.52□□□□□ -0.41
PSEN1-208ENST00000553719 PRADC1Q9BSG0 188 aa12.52□□□□□ -0.41
PSEN1-208ENST00000553719 TGIF2-C20orf24A0A0A6YYL0 155 aa12.51□□□□□ -0.41
PSEN1-208ENST00000553719 TRAV26-2A0A0B4J265 109 aa12.51□□□□□ -0.41
PSEN1-208ENST00000553719 TMEM136Q6ZRR5 245 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 198.3 ms